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Oxidative phosphorylation

 

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Oxidative phosphorylation



 
 
Oxidative phosphorylation is a metabolic pathway
Metabolic pathway

In biochemistry, a metabolic pathway is a series of chemistry reactions occurring within a cell . In each pathway, a principal chemical is modified by chemical reactions....
 that uses energy released by the oxidation
Redox

Redox describes all chemical reactions in which atoms have their oxidation number changed.This can be either a simple redox process such as the oxidation of carbon to yield carbon dioxide or the reduction of carbon by hydrogen to yield methane , or it can be a complex process such as the oxidation of sugar in the human body through a ser...
 of nutrient
Nutrient

A nutrient is a chemical that an organism needs to live and grow or a substance used in an organism's metabolism which must be taken in from its environment....
s to produce adenosine triphosphate
Adenosine triphosphate

This article is about the chemical used by cells as an energy carrier. For other uses, see ATP .Adenosine-5'-triphosphate is a multifunctional nucleotide, and plays an important role in cell biology as a coenzyme that is the "molecule unit of currency" of intracellular energy transfer....
 (ATP). Although the many forms of life on earth use a range of different nutrients, almost all carry out oxidative phosphorylation to produce ATP, the molecule that supplies energy to metabolism
Metabolism

Metabolism is the set of chemical reactions that occur in living organisms in order to maintain life. These processes allow organisms to grow and reproduce, maintain their structures, and respond to their environments....
. This pathway is probably so pervasive because it is a highly efficient way of releasing energy, compared to alternative fermentation
Fermentation (biochemistry)

Fermentation is the process of deriving energy from the Redox of organic compounds, such as carbohydrates, using an Endogeny electron acceptor, which is usually an organic compound....
 processes such as anaerobic glycolysis
Glycolysis

Glycolysis is the metabolic pathway that converts glucose, C6H12O6, into pyruvate, C3H5O3-....
.

During oxidative phosphorylation, electrons are transferred from electron donors
Reducing agent

A reducing agent is the element or compound in a redox reaction that reduces another Chemical species. In doing so, it becomes oxidized, and is therefore the electron donor in the redox....
 to electron acceptors
Oxidizing agent

An oxidizing agent can be defined as either:#a chemical compound that readily transfers oxygen atoms, or#a substance that gains electrons in a redox chemical reaction...
 such as oxygen
Oxygen

Oxygen no O2 produced; 2) O2 produced, but absorbed in oceans & seabed rock; 3) O2 starts to gas out of the oceans, but is absorbed by land surfaces and formation of ozone layer; 4-5) O2 sinks filled and the gas accumulates]]...
, in redox reactions.






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Oxidative phosphorylation is a metabolic pathway
Metabolic pathway

In biochemistry, a metabolic pathway is a series of chemistry reactions occurring within a cell . In each pathway, a principal chemical is modified by chemical reactions....
 that uses energy released by the oxidation
Redox

Redox describes all chemical reactions in which atoms have their oxidation number changed.This can be either a simple redox process such as the oxidation of carbon to yield carbon dioxide or the reduction of carbon by hydrogen to yield methane , or it can be a complex process such as the oxidation of sugar in the human body through a ser...
 of nutrient
Nutrient

A nutrient is a chemical that an organism needs to live and grow or a substance used in an organism's metabolism which must be taken in from its environment....
s to produce adenosine triphosphate
Adenosine triphosphate

This article is about the chemical used by cells as an energy carrier. For other uses, see ATP .Adenosine-5'-triphosphate is a multifunctional nucleotide, and plays an important role in cell biology as a coenzyme that is the "molecule unit of currency" of intracellular energy transfer....
 (ATP). Although the many forms of life on earth use a range of different nutrients, almost all carry out oxidative phosphorylation to produce ATP, the molecule that supplies energy to metabolism
Metabolism

Metabolism is the set of chemical reactions that occur in living organisms in order to maintain life. These processes allow organisms to grow and reproduce, maintain their structures, and respond to their environments....
. This pathway is probably so pervasive because it is a highly efficient way of releasing energy, compared to alternative fermentation
Fermentation (biochemistry)

Fermentation is the process of deriving energy from the Redox of organic compounds, such as carbohydrates, using an Endogeny electron acceptor, which is usually an organic compound....
 processes such as anaerobic glycolysis
Glycolysis

Glycolysis is the metabolic pathway that converts glucose, C6H12O6, into pyruvate, C3H5O3-....
.

During oxidative phosphorylation, electrons are transferred from electron donors
Reducing agent

A reducing agent is the element or compound in a redox reaction that reduces another Chemical species. In doing so, it becomes oxidized, and is therefore the electron donor in the redox....
 to electron acceptors
Oxidizing agent

An oxidizing agent can be defined as either:#a chemical compound that readily transfers oxygen atoms, or#a substance that gains electrons in a redox chemical reaction...
 such as oxygen
Oxygen

Oxygen no O2 produced; 2) O2 produced, but absorbed in oceans & seabed rock; 3) O2 starts to gas out of the oceans, but is absorbed by land surfaces and formation of ozone layer; 4-5) O2 sinks filled and the gas accumulates]]...
, in redox reactions. These redox reactions release energy, which is used to form ATP. In eukaryote
Eukaryote

Animals, plants, fungus, and protists are eukaryotes , organisms whose Cell are organized into complex structures enclosed within Cell membrane....
s, these redox reactions are carried out by a series of protein complex
Protein complex

A multiprotein complex is a group of two or more proteins. Protein complexes are a form of quaternary structure. Proteins in a protein complex are linked by non-covalent protein-protein interactions, and different protein complexes have different degrees of stability over time....
es within mitochondria
Mitochondrion

In cell biology, a mitochondrion is a membrane-enclosed organelle found in most eukaryote cell . These organelles range from 0.5–10 micrometers in diameter....
, whereas, in prokaryote
Prokaryote

The prokaryotes are a group of organisms that lack a cell nucleus , or any other cell membrane-bound organelles. They differ from the eukaryotes, which have a cell nucleus....
s, these proteins are located in the cells' inner membranes. These linked sets of enzymes are called electron transport chain
Electron transport chain

An electron transport chain couples a chemical reaction between an electron donor and an electron acceptor to the transfer of proton across a Cell membrane, through a set of mediating biochemical reactions....
s. In eukaryotes, five main protein complexes are involved, whereas in prokaryotes many different enzymes are present, using a variety of electron donors and acceptors.

The energy released as electrons flow through this electron transport chain is used to transport protons across the inner mitochondrial membrane
Inner mitochondrial membrane

The mitochondrial inner membrane forms internal compartments known as cristae, which allow greater space for the proteins such as cytochromes to function properly and efficiently....
, in a process called chemiosmosis
Chemiosmosis

Chemiosmosis is the diffusion of ions across a selectively-permeable membrane. More specifically, it relates to the generation of Adenosine triphosphate by the movement of hydrogen ions across a inner membrane during cellular respiration....
. This generates potential energy
Potential energy

Potential energy can be thought of as energy stored within a physical system. It is called potential energy because it has the potential to be converted into other forms of energy, such as kinetic energy, and to do Mechanical work in the process....
 in the form of a pH
PH

pH is a measure of the Acid or Base of a solution. It is defined as the cologarithm of the Activity of dissolved hydrogen ions . Hydrogen ion activity coefficients cannot be measured experimentally, so they are based on theoretical calculations....
 gradient and an electrical potential
Membrane potential

Membrane potential , is the voltage difference between the interior and exterior of a cell. Because the fluid inside and outside a cell is highly conductive, whereas a cell's plasma membrane is highly resistive, the voltage change in moving from a point outside to a point inside occurs largely within the narrow width of the membrane itself...
 across this membrane. This store of energy is tapped by allowing protons to flow back across the membrane and down this gradient, through a large enzyme
Enzyme

Enzymes are biomolecules that catalysis chemical reactions. Almost all enzymes are proteins. In enzymatic reactions, the molecules at the beginning of the process are called Substrate , and the enzyme converts them into different molecules, the products....
 called ATP synthase
ATP synthase

An ATP synthase is a general term for an enzyme that can synthesize adenosine triphosphate from adenosine diphosphate and inorganic phosphate by using some form of energy....
. This enzyme uses this energy to generate ATP from adenosine diphosphate
Adenosine diphosphate

Adenosine diphosphate, abbreviated ADP, is a nucleotide. It is an ester of pyrophosphoric acid with the nucleoside adenosine. ADP consists of the pyrophosphate Functional group, the pentose sugar ribose, and the nucleobase adenine....
 (ADP), in a phosphorylation
Phosphorylation

Phosphorylation is the addition of a phosphate group to a protein or other organic molecule. Protein phosphorylation in particular plays a significant role in a wide range of cellular processes....
 reaction. This reaction is driven by the proton flow, which forces the rotation
Rotation

A rotation is a movement of an object in a circular motion. A two-dimensional object rotates around a center of rotation. A Three-dimensional space object rotates around a line called an axis....
 of a part of the enzyme; the ATP synthase is a rotary mechanical motor.

Although oxidative phosphorylation is a vital part of metabolism
Metabolism

Metabolism is the set of chemical reactions that occur in living organisms in order to maintain life. These processes allow organisms to grow and reproduce, maintain their structures, and respond to their environments....
, it produces reactive oxygen species
Reactive oxygen species

Reactive oxygen species are ions or very small molecules that include oxygen ions, radical , and peroxides, both inorganic and organic peroxide....
 such as superoxide
Superoxide

Superoxide is the anion O2−. It is important as the product of the one-electron reduction of dioxygen, which occurs widely in nature....
 and hydrogen peroxide
Hydrogen peroxide

Hydrogen peroxide is a very pale blue liquid which appears colorless in a dilute solution, slightly more viscous than water. It is a weak acid....
, which lead to propagation of free radicals
Radical (chemistry)

In chemistry, radicals are atoms, molecules or ions with unpaired electrons on an otherwise open shell configuration. These unpaired electrons are usually highly chemical reaction, so radicals are likely to take part in chemical reactions....
, damaging cells and contributing to disease
Disease

A disease or medical condition is an abnormal condition of an organism that impairs bodily functions, associated with specific symptoms and Medical signs....
 and, possibly, aging (senescence
Senescence

Senescence encompasses all of the biological processes of a living organism's approaching an advanced age . The word senescence is derived from the Latin word senex, meaning "old man" or "old age" or "advanced in age"....
). The enzymes carrying out this metabolic pathway are also the target of many drugs and poison
Poison

In the context of biology, poisons are Chemical substance that can cause disturbances to organisms, usually by chemical reaction or other activity on the molecular scale, when a sufficient quantity is absorbed by an organism....
s that inhibit
Enzyme inhibitor

Enzyme inhibitors are molecules that bind to enzymes and decrease their enzyme activity. Since blocking an enzyme's activity can kill a pathogen or correct a metabolism imbalance, many drugs are enzyme inhibitors....
 their activities.

Overview of energy transfer by chemiosmosis

Oxidative phosphorylation works by using energy
Energy

In physics, energy is a scalar physical quantity that describes the amount of Work_ that can be performed by a force. Energy is an attribute of objects and systems that is subject to a conservation law....
-releasing chemical reactions to drive energy-requiring reactions: The two sets of reactions are said to be coupled. This means one cannot occur without the other. The flow of electrons through the electron transport chain, from electron donors such as NADH to electron acceptors such as oxygen, is an exergonic
Exergonic

Exergonic means to release energy in the form of work. Its etymology stems from the suffix -ergonic, as derived from the Greek root ergon, meaning work , combined with the Greek prefix ex-, meaning out of....
 process – it releases energy, whereas the synthesis of ATP is an endergonic
Endergonic

Endergonic means absorbing energy in the form of work. Its etymology stems from the suffix -ergonic, as derived from the Greek root ergon, meaning work , combined with the prefix end-, as derived from the Greek root en, meaning put into....
 process, which requires an input of energy. Both the electron transport chain and the ATP synthase are embedded in a membrane, and energy is transferred from electron transport chain to the ATP synthase by movements of protons across this membrane, in a process called chemiosmosis
Chemiosmosis

Chemiosmosis is the diffusion of ions across a selectively-permeable membrane. More specifically, it relates to the generation of Adenosine triphosphate by the movement of hydrogen ions across a inner membrane during cellular respiration....
. In practice, this is like a simple electric circuit
Electrical network

An electrical network is an interconnection of electrical elements such as resistors, inductors, capacitors, transmission lines, voltage sources, current sources, and switches....
, with a current of protons being driven from the negative N-side of the membrane to the positive P-side by the proton-pumping enzymes of the electron transport chain. These enzymes are like a battery
Battery (electricity)

In electronics, a battery or voltaic cell is a combination of one or more electrochemical cell Galvanic cells which store chemical energy that can be converted into electric potential energy, creating electricity....
, as they perform work
Work (thermodynamics)

In thermodynamics, work is the quantity of energy transferred from one system to another without an accompanying transfer of entropy. It is a generalization of the concept of mechanical work in mechanics....
 to drive current through the circuit. The movement of protons creates an electrochemical gradient
Electrochemical gradient

An electrochemical gradient is a spatial variation of both electrical potential and chemical concentration across a membrane. Both components are often due to ion gradients, particularly proton gradients, and the result can be a type of potential energy available for work in a cell....
 across the membrane, which is often called the proton-motive force. This gradient has two components: a difference in proton concentration (a pH gradient) and a difference in electric potential
Electric potential

At a point in space, the electric potential is the potential energy per unit of electric charge that is associated with a static electric field....
, with the N-side having a negative charge. The energy is stored largely as the difference of electric potential
Electric potential

At a point in space, the electric potential is the potential energy per unit of electric charge that is associated with a static electric field....
s in mitochondria
Mitochondrion

In cell biology, a mitochondrion is a membrane-enclosed organelle found in most eukaryote cell . These organelles range from 0.5–10 micrometers in diameter....
, but also as a pH gradient in chloroplast
Chloroplast

Chloroplasts are organelles found in plant cells and other eukaryote organisms that conduct photosynthesis. Chloroplasts capture light energy to conserve Thermodynamic free energy in the form of Adenosine triphosphate and reduce NADP to NADPH through a complex set of processes called photosynthesis....
s.

ATP synthase releases this stored energy by completing the circuit and allowing protons to flow down the electrochemical gradient, back to the N-side of the membrane. This enzyme is like an electric motor
Electric motor

An electric motor uses electrical energy to produce mechanical energy, nearly always by the interaction of magnetic fields and current-carrying conductors....
 as it uses the proton-motive force to drive the rotation of part of its structure and couples this motion to the synthesis of ATP.

The amount of energy released by oxidative phosphorylation is high, compared with the amount produced by anaerobic fermentation. Glycolysis
Glycolysis

Glycolysis is the metabolic pathway that converts glucose, C6H12O6, into pyruvate, C3H5O3-....
 produces only 2 ATP molecules, but somewhere between 30–36 ATPs are produced by the oxidative phosphorylation of the 10 NADH and 2 succinate molecules made by converting one molecule of glucose
Glucose

Glucose , a monosaccharide also known as grape sugar, blood sugar, or corn sugar, is a very important carbohydrate in biology....
 to carbon dioxide and water. This ATP yield is the theoretical maximum value; in practice, some protons leak across the membrane, lowering the yield of ATP.

Electron and proton transfer molecules

The electron transport chain carries both protons and electrons, passing electrons from donors to acceptors, and transporting protons across a membrane. These processes use both soluble and protein-bound transfer molecules. In mitochondria, electrons are transferred within the intermembrane space by the water-soluble electron transfer protein cytochrome c
Cytochrome c

Cytochrome c, or cyt c is a small heme protein found loosely associated with the inner membrane of the mitochondrion. It belongs to the cytochrome c family of proteins....
. This carries only electrons, and these are transferred by the reduction and oxidation of an iron
Iron

Iron is a chemical element with the symbol Fe and atomic number 26. Iron is a Group 8 element and period 4 element. Iron is lustrous and silvery in color....
 atom that the protein holds within a heme
Heme

A heme or haem is a prosthetic group that consists of an iron atom contained in the center of a large heterocyclic organic ring called a porphyrin....
 group in its structure. Cytochrome c is also found in some bacteria, where it is located within the periplasmic space
Periplasmic space

The periplasmic space or periplasm is a space between the inner cytoplasmic membrane and external outer membrane of Gram-negative bacterium or the equivalent space between the cell membrane and cell wall in Gram-positive bacteria....
.

Within the inner mitochondrial membrane, the lipid
Lipid

Lipids are broadly defined as any fat-soluble , naturally-occurring molecule, such as fats, oils, waxes, cholesterol, sterols, fat-soluble vitamins , monoglycerides, diglycerides, phospholipids, and others....
-soluble electron carrier coenzyme Q10 (Q) carries both electrons and protons by a redox
Redox

Redox describes all chemical reactions in which atoms have their oxidation number changed.This can be either a simple redox process such as the oxidation of carbon to yield carbon dioxide or the reduction of carbon by hydrogen to yield methane , or it can be a complex process such as the oxidation of sugar in the human body through a ser...
 cycle. This small benzoquinone
1,4-Benzoquinone

1,4-Benzoquinone is the chemical compound with the chemical formula C6H4O2. In pure state, it forms bright yellow crystals with characteristic irritating odor, resembling that of chlorine; impure samples are often dark colored due to the presence of quinhydrone ....
 molecule is very hydrophobic
Hydrophobe

In chemistry, hydrophobicity refers to the physical property of a molecule that is repelled from a mass of water.Hydrophobic molecules tend to be non-polar and thus prefer other neutral molecules and nonpolar solvents....
, so it diffuses freely within the membrane. When Q accepts two electrons and two protons, it becomes reduced to the ubiquinol
Hydroquinone

Hydroquinone, also benzene-1,4-diol or quinol, is an aromatic organic compound which is a type of Phenols, having the chemical formula C6H42....
 form (QH2); when QH2 releases two electrons and two protons, it becomes oxidized back to the ubiquinone (Q) form. As a result, if two enzymes are arranged so that Q is reduced on one side of the membrane and QH2 oxidized on the other, ubiquinone will couple these reactions and shuttle protons across the membrane. Some bacterial electron transport chains use different quinones, such as menaquinone
Vitamin K

Vitamin K denotes a group of lipophilic, hydrophobic vitamins that are needed for the posttranslational modification of certain proteins, mostly required for blood coagulation....
, in addition to ubiquinone.

Within proteins, electrons are transferred between flavin
Flavin

Flavin is the common name for a group of organic compounds based on pteridine, formed by the Heterocycle isoalloxazine. The biochemical source is the vitamin riboflavin....
 cofactors, iron–sulfur clusters, and cytochromes. There are several types of iron–sulfur cluster. The simplest kind found in the electron transfer chain consists of two iron atoms joined by two atoms of inorganic sulfur
Sulfur

Sulfur or sulphur is the chemical element that has the atomic number 16. It is denoted with the symbol S. It is an abundant Valence non-metal....
; these are called [2Fe–2S] clusters. The second kind, called [4Fe–4S], contains a cube of four iron atoms and four sulfur atoms. Each iron atom in these clusters is coordinated by an additional amino acid
Amino acid

In chemistry, an amino acid is a molecule containing both amine and carboxyl functional groups. These molecules are particularly important in biochemistry, where this term refers to alpha-amino acids with the general formula H2NCHRCOOH, where R is an organic substituent....
, usually by the sulfur atom of cysteine
Cysteine

Cysteine is an a-amino acid with the chemical formula HO2CCHCH2SH. It is a non-essential amino acid, which means that humans can synthesize it....
. Metal ion cofactors undergo redox reactions without binding or releasing protons, so in the electron transport chain they serve solely to transport electrons through proteins. Electrons move quite long distances through proteins by hopping along chains of these cofactors. This occurs by quantum tunnelling
Quantum tunnelling

In quantum mechanics, wave-mechanical tunneling is an evanescent wave that occurs because the behaviour of particles is governed by Schroedinger equation....
, which is rapid over distances of less than 1.4 m.

Eukaryotic electron transport chains

Many catabolic biochemical processes, such as glycolysis
Glycolysis

Glycolysis is the metabolic pathway that converts glucose, C6H12O6, into pyruvate, C3H5O3-....
, the citric acid cycle
Citric acid cycle

The citric acid cycle ? also known as the tricarboxylic acid cycle ; the Krebs cycle; or, more rarely, the Szent-Gy?rgyi-Krebs cycle) ? is a series of enzyme-catalysed chemical reactions of central importance in all living cell s that use oxygen as part of cellular respiration....
 and beta oxidation, produce the reduced coenzyme
Coenzyme

Many enzymes require a cofactor for catalytic activity, accelerating the transformation of a specific substrate to a particular product. The inactive protein, without the cofactor is called an apoenzyme, while the complete enzyme with cofactor is the holoenzyme....
 NADH. This coenzyme contains electrons that have a high transfer potential
Standard electrode potential

In electrochemistry, the standard electrode potential, abbreviated E? or Eo , is the measure of individual potential of a reversible electrode at standard state, which is with solutes at an effective concentration of 1 moldm-3, and gases at a pressure of 1 bar....
; in other words, they will release a large amount of energy upon oxidation. However, the cell does not release this energy all at once, as this would be an uncontrollable reaction. Instead, the electrons are removed from NADH and passed to oxygen through a series of enzymes that each release a small amount of the energy. This set of enzymes, consisting of complexes I through IV, is called the electron transport chain and is found in the inner membrane of the mitochondrion. Succinate
Succinic acid

Succinic acid is a dicarboxylic acid. Succinate plays a biochemical role in the citric acid cycle....
 is also oxidized by the electron transport chain, but feeds into the pathway at a different point.

In eukaryote
Eukaryote

Animals, plants, fungus, and protists are eukaryotes , organisms whose Cell are organized into complex structures enclosed within Cell membrane....
s, the enzymes in this electron transport system use the energy released from the oxidation of NADH to pump proton
Proton

The proton is a subatomic particle with an electric charge of +1 elementary charge. It is found in the nucleus of each atom but is also stable by itself and has a second identity as the hydrogen ion, H+....
s across the inner membrane of the mitochondrion. This causes protons to build up in the intermembrane space
Intermembrane space

The intermembrane space is the region between the inner membrane and the outer membrane of a mitochondrion or a chloroplast. The main function of the intermembrane space is oxidative phosphorylation....
, and generates an electrochemical gradient
Electrochemical gradient

An electrochemical gradient is a spatial variation of both electrical potential and chemical concentration across a membrane. Both components are often due to ion gradients, particularly proton gradients, and the result can be a type of potential energy available for work in a cell....
 across the membrane. The energy stored in this potential is then used by ATP synthase to produce ATP. Oxidative phosphorylation in the eukaryotic mitochondrion is the best-understood example of this process. The mitochondrion is present in almost all eukaryotes, with the exception of anaerobic protozoa such as Trichomonas vaginalis
Trichomonas vaginalis

Trichomonas vaginalis, an Anaerobic organism, parasite flagellated protozoan, is the causative agent of trichomoniasis, and is the most common pathogenic protozoan infection of humans in industrialized countries....
 that instead reduce protons to hydrogen in a remnant mitochondrion called a hydrogenosome
Hydrogenosome

A hydrogenosome is a membrane-enclosed organelle of some Anaerobic organism ciliates, trichomonas and fungi. The hydrogenosomes of trichomonads produce molecular hydrogen, acetate, carbon dioxide and Adenosine triphosphate by the combined actions of Pyruvate synthase, hydrogenase, Acetate CoA-transferase and Succinyl coenzyme A synthetase....
.

NADH-coenzyme Q oxidoreductase (complex I)


NADH-coenzyme Q oxidoreductase
NADH dehydrogenase

NADH dehydrogenase is an enzyme located in the inner mitochondria membrane that catalyzes the transfer of electrons from NADH to coenzyme Q ....
, also known as NADH dehydrogenase or complex I, is the first protein in the electron transport chain. Complex I is a giant enzyme
Enzyme

Enzymes are biomolecules that catalysis chemical reactions. Almost all enzymes are proteins. In enzymatic reactions, the molecules at the beginning of the process are called Substrate , and the enzyme converts them into different molecules, the products....
 with the mammalian complex I having 46 subunits and a molecular mass of about 1,000 kilodaltons
Atomic mass unit

The unified atomic mass unit , or dalton or, sometimes, universal mass unit, is a Units of measurement of mass used to express atomic weight and molecular masses....
 (kDa). The structure is known in detail only from a bacterium; in most organisms the complex resembles a boot with a large “ball” poking out from the membrane into the mitochondrion. The genes that encode the individual proteins are contained in both the cell nucleus
Cell nucleus

In cell biology, the nucleus , also sometimes referred to as the "control center", is a membrane-enclosed organelle found in all eukaryote cell ....
 and the mitochondrial genome
Mitochondrial genome

The mitochondrial genome is the genetic material of the mitochondria. The mitochondria are organelles that reproduce themselves semi-autonomously within eukaryote cells....
, as is the case for many enzymes present in the mitochondrion.

The reaction that is catalyzed by this enzyme is the two electron reduction by NADH
Nicotinamide adenine dinucleotide

Nicotinamide adenine dinucleotide, abbreviated NAD+, is a coenzyme found in all living cell s. The compound is a dinucleotide, since it consists of two nucleotides joined through their phosphate groups: with one nucleotide containing an adenine base, and the other containing nicotinamide....
 of coenzyme Q10 or ubiquinone (represented as Q in the equation below), a lipid-soluble quinone
Quinone

Quinones are "compounds having a fully conjugated cyclic Diketone structure, such as that of benzoquinones, derived from aromatic compounds by conversion of an even number of ?CH= groups into ?C? groups with any necessary rearrangement of double bonds ."...
 that is found in the mitochondrion membrane:

  

The start of the reaction, and indeed of the entire electron chain, is the binding of a NADH molecule to complex I and the donation of two electrons. The electrons enter complex I via a prosthetic group
Prosthetic group

A prosthetic group is a non-protein component of a conjugated protein that is required for the protein's biological activity. The prosthetic group may be organic compound or inorganic ....
 attached to the complex, flavin mononucleotide
Flavin mononucleotide

Flavin mononucleotide , or riboflavin-5'-phosphate, is a biomolecule produced from riboflavin by the enzyme riboflavin kinase and functions as prosthetic group of various oxidoreductases including NADH dehydrogenase....
 (FMN). The addition of electrons to FMN converts it to its reduced form, FMNH2. The electrons are then transferred through a series of iron–sulfur clusters
Iron-sulfur cluster

For biological Fe-S clusters, see iron-sulfur proteins.Iron-sulfur clusters are ensembles of iron and sulfide centres. Fe-S clusters are most often discussed in the context of the biological role for iron-sulfur proteins....
: the second kind of prosthetic group present in the complex. There are both [2Fe–2S] and [4Fe–4S] iron–sulfur clusters in complex I.

As the electrons pass through this complex, four protons are pumped from the matrix into the intermembrane space. Exactly how this occurs is unclear, but it seems to involve conformational change
Conformational change

A macromolecule is usually flexible and dynamic. It can change its shape in response to changes in its environment or other factors; each possible shape is called a conformation, and a transition between them is called a conformational change....
s in complex I that cause the protein to bind protons on the N-side of the membrane and then move them onto the P-side of the membrane. Finally, the electrons are transferred from the chain of iron–sulfur clusters to a ubiquinone molecule in the membrane. Reduction of ubiquinone also contributes to the generation of a proton gradient, as two protons are taken up from the matrix as it is reduced to ubiquinol
Ubiquinol

Ubiquinol is a benzoquinol and is the reduced product of ubiquinone also called coenzyme Q10....
 (QH2).

Succinate-Q oxidoreductase (complex II)


Succinate-Q oxidoreductase
Succinate - coenzyme Q reductase

Succinate-coenzyme Q reductase is an enzyme complex bound to the inner mitochondrial membrane of mammalian and many bacterial cells. It is the only enzyme that participates in both the citric acid cycle and the mammalian, mitochondrial, and bacterial electron transport chain....
, also known as complex II or succinate dehydrogenase, is a second entry point to the electron transport chain. It is unusual because it is the only enzyme that is part of both the citric acid cycle and the electron transport chain. Complex II consists of four protein subunits and contains a bound flavin adenine dinucleotide
FAD

In biochemistry, flavin adenine dinucleotide is a redox Cofactor involved in several important reactions in metabolism. FAD can exist in two different redox states and its biochemical role usually involves changing between these two states....
 (FAD) cofactor, iron–sulfur clusters, and a heme
Heme

A heme or haem is a prosthetic group that consists of an iron atom contained in the center of a large heterocyclic organic ring called a porphyrin....
 group that does not participate in electron transfer to coenzyme Q, but is believed to be important in decreasing production of reactive oxygen species. It oxidizes succinate
Succinic acid

Succinic acid is a dicarboxylic acid. Succinate plays a biochemical role in the citric acid cycle....
 to fumarate
Fumaric acid

Fumaric acid is the chemical compound with the formula HO2CCH=CHCO2H. This white crystalline compound is one of two isomeric unsaturated dicarboxylic acids, the other being maleic acid wherein the carboxylic acid groups are cis....
 and reduces ubiquinone. As this reaction releases less energy than the oxidation of NADH, complex II does not transport protons across the membrane and does not contribute to the proton gradient.

  

In some eukaryotes, such as the parasitic worm
Parasitic worm

See also Parasitic worm Parasitic worms or helminths are a division of eukaroytic parasites that, unlike external parasites such as lice and fleas, live inside their host....
 Ascaris suum
Large roundworm of pigs

Ascaris suum is a parasitism nematode that causes Ascariasis in pigs....
, an enzyme similar to complex II, fumarate reductase (menaquinol:fumarate oxidoreductase, or QFR), operates in reverse to oxidize ubiquinol and reduce fumarate. This allows the worm to survive in the anaerobic environment of the large intestine
Large intestine

The large intestine is the last part of the digestive system?the final stage of the alimentary canal?in vertebrate animals. Its function is to absorb water from the remaining indigestible food matter, and then to pass this useless feces from the body....
, carrying out anaerobic oxidative phosphorylation with fumarate as the electron acceptor. Another unconventional function of complex II is seen in the malaria
Malaria

Malaria is a Vector -borne infectious disease caused by protozoan parasites. It is widespread in Tropics and subtropical regions, including parts of the Americas, Asia, and Africa....
 parasite Plasmodium falciparum
Plasmodium falciparum

Plasmodium falciparum is a protozoan parasite, one of the species of Plasmodium that cause malaria in humans. It is transmitted by the female...
. Here, the reversed action of complex II as an oxidase is important in regenerating ubiquinol, which the parasite uses in an unusual form of pyrimidine
Pyrimidine

Pyrimidine is a heterocyclic aromatic organic compound similar to benzene and pyridine, containing two nitrogen atoms at positions 1 and 3 of the six-member ring....
 biosynthesis.

Electron transfer flavoprotein-Q oxidoreductase

Electron transfer flavoprotein-ubiquinone oxidoreductase
Electron-transferring-flavoprotein dehydrogenase

Electron-transferring-flavoprotein dehydrogenase is an enzyme that transfers electrons from electron-transferring flavoprotein in the mitochondrial matrix, to the coenzyme Q pool in the inner mitochondrial membrane....
 (ETF-Q oxidoreductase), also known as electron transferring-flavoprotein dehydrogenase, is a third entry point to the electron transport chain. It is an enzyme that accepts electrons from electron-transferring flavoprotein
Electron-transferring flavoprotein

Electron transfer flavoproteins serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems such as electron-transferring-flavoprotein dehydrogenase....
 in the mitochondrial matrix, and uses these electrons to reduce ubiquinone. This enzyme contains a flavin
Flavin

Flavin is the common name for a group of organic compounds based on pteridine, formed by the Heterocycle isoalloxazine. The biochemical source is the vitamin riboflavin....
 and a [4Fe–4S] cluster, but unlike the other respiratory complexes, it attaches to the surface of the membrane and does not cross the lipid bilayer.

  

In mammals, this metabolic pathway is important in beta oxidation
Beta oxidation

Beta oxidation is the process by which fatty acids, in the form of Acyl-CoA molecules, are broken down in mitochondria and/or in peroxisomes to generate Acetyl-CoA, the entry molecule for the Krebs cycle....
 of fatty acid
Fatty acid

In chemistry, especially biochemistry, a fatty acid is a carboxylic acid often with a long unbranched aliphatic tail , which is either saturation or Unsaturated compound....
s and catabolism of amino acid
Amino acid

In chemistry, an amino acid is a molecule containing both amine and carboxyl functional groups. These molecules are particularly important in biochemistry, where this term refers to alpha-amino acids with the general formula H2NCHRCOOH, where R is an organic substituent....
s and choline
Choline

Choline is an organic compound, classified as a water-soluble essential nutrient and usually grouped within the Vitamin B complex. This natural amine is found in the lipids that make up cell membranes and in the neurotransmitter acetylcholine....
, as it accepts electrons from multiple acetyl-CoA
Acetyl-CoA

Acetyl-CoA is an important molecule in metabolism, used in many biochemical reactions. Its main use is to convey the carbon atoms within the acetyl group to the citric acid cycle to be oxidation for energy production....
 dehydrogenases. In plants, ETF-Q oxidoreductase is also important in the metabolic responses that allow survival in extended periods of darkness.

Q-cytochrome c oxidoreductase (complex III)


Q-cytochrome c oxidoreductase
Coenzyme Q - cytochrome c reductase

The coenzyme Q : cytochrome c ? oxidoreductase, sometimes called the cytochrome bc1 complex, and at other times complex III, is the third complex in the electron transport chain , playing a critical role in biochemical generation of ATP ....
 is also known as cytochrome c reductase, cytochrome bc1 complex, or simply complex III. In mammals, this enzyme is a dimer
Dimer

File:Carboxylic acid dimers.pngA dimer is a chemical or biological entity consisting of two identical subunits called monomers, which are held together by either intramolecular forces or weaker intermolecular forces....
, with each subunit complex containing 11 protein subunits, an [2Fe-2S] iron–sulfur cluster and three cytochrome
Cytochrome

Cytochromes are, in general, membrane-bound hemoproteins that contain heme groups and carry out electron transport.They are found either as subunitss or as subunits of bigger enzymatic complexes that catalyze redox reactions....
s; one cytochrome
Cytochrome

Cytochromes are, in general, membrane-bound hemoproteins that contain heme groups and carry out electron transport.They are found either as subunitss or as subunits of bigger enzymatic complexes that catalyze redox reactions....
 c1 and two b cytochromes. A cytochrome is a kind of electron-transferring protein that contains at least one heme
Heme

A heme or haem is a prosthetic group that consists of an iron atom contained in the center of a large heterocyclic organic ring called a porphyrin....
 group. The iron atoms inside complex III’s heme groups alternate between a reduced ferrous (+2) and oxidized ferric (+3) state as the electrons are transferred through the protein.

The reaction catalyzed by complex III is the oxidation of one molecule of ubiquinol
Ubiquinol

Ubiquinol is a benzoquinol and is the reduced product of ubiquinone also called coenzyme Q10....
 and the reduction of two molecules of cytochrome c
Cytochrome c

Cytochrome c, or cyt c is a small heme protein found loosely associated with the inner membrane of the mitochondrion. It belongs to the cytochrome c family of proteins....
, a heme protein loosely associated with the mitochondrion. Unlike coenzyme Q, which carries two electrons, cytochrome c carries only one electron.

  

As only one of the electrons can be transferred from the QH2 donor to a cytochrome c acceptor at a time, the reaction mechanism of complex III is more elaborate than those of the other respiratory complexes, and occurs in two steps called the Q cycle. In the first step, the enzyme binds three substrates, first, QH2, which is then oxidized, with one electron being passed to the second substrate, cytochrome c. The two protons released from QH2 pass into the intermembrane space. The third substrate is Q, which accepts the second electron from the QH2 and is reduced to Q.-, which is the ubisemiquinone
Semiquinone

An Ubisemiquinone is a free radical resulting from the removal of one hydrogen atom with its electron during the process of dehydrogenation of a hydroquinone to quinone or alternatively the addition of a single H atom to a quinone....
 free radical. The first two substrates are released, but this ubisemiquinone intermediate remains bound. In the second step, a second molecule of QH2 is bound and again passes its first electron to a cytochrome c acceptor. The second electron is passed to the bound ubisemiquinone, reducing it to QH2 as it gains two protons from the mitochondrial matrix. This QH2 is then released from the enzyme.

As coenzyme Q is reduced to ubiquinol on the inner side of the membrane and oxidized to ubiquinone on the other, this causes the net transfer of protons across the membrane, adding to the proton gradient. The rather complex two-step mechanism by which this occurs is important as it increases the efficiency of proton transfer. If instead of the Q cycle, one molecule of QH2 was used to directly reduce two molecules of cytochrome c, the efficiency would be halved, with only one proton transferred per cytochrome c reduced.

Cytochrome c oxidase (complex IV)


Cytochrome c oxidase
Cytochrome c oxidase

The enzyme cytochrome c oxidase or Complex IV is a large transmembrane protein complex found in bacteria and the mitochondrion.It is the last enzyme in the respiratory electron transport chain of mitochondria located in the mitochondrial membrane....
, also known as complex IV, is the final protein complex in the electron transport chain. The mammalian enzyme has an extremely complicated structure and contains 13 subunits, two heme groups, as well as multiple metal ion cofactors – in all three atoms of copper
Copper

Copper is a chemical element with the symbol Cu and atomic number 29.It is a ductile metal with very high thermal and electrical conductivity....
, one of magnesium
Magnesium

Magnesium is a chemical element with the symbol Mg, atomic number 12, atomic weight 24.3050 and common oxidation number +2.Magnesium, an alkaline earth metal, is the ninth most abundance of the chemical elements in the universe by mass....
 and one of zinc
Zinc

Zinc is a metallic chemical element with the symbol Zn and atomic number 30. It is a first-row transition metal of the group 12 element of the periodic table....
.

This enzyme mediates the final reaction in the electron transport chain and transfers electrons to oxygen, while pumping protons across the membrane. The final electron acceptor
Electron acceptor

An electron acceptor is a chemical entity that accepts electrons transferred to it from another compound. It is an oxidizing agent that, by virtue of its accepting electrons, is itself reduced in the process....
 oxygen, which is also called the terminal electron acceptor, is reduced to water in this step. Both the direct pumping of protons and the consumption of matrix protons in the reduction of oxygen contribute to the proton gradient. The reaction catalyzed is the oxidation of cytochrome c and the reduction of oxygen:

  

Alternative reductases and oxidases

Many eukaryotic organisms have electron transport chains that differ from the well-studied mammalian enzymes described above. For example, in plant
Plant

Plants are Life organisms belonging to the Kingdom Plantae. They include familiar organisms such as trees, herbs, bushes, grasses, vines, ferns, mosses, and green algae....
s, alternative NADH oxidases exist that oxidize NADH in the cytosol, rather than the mitochondrial matrix, and pass these electrons to the ubiquinone pool. These enzymes do not transport protons and therefore reduce ubiquinone without altering the electrochemical gradient across the inner membrane.

Another example of a divergent electron transport chain is the alternative oxidase
Alternative oxidase

The alternative oxidase is an enzyme that forms part of the electron transport chain in plants, as well as some fungus, protists and possibly some animals....
, which is found in plant
Plant

Plants are Life organisms belonging to the Kingdom Plantae. They include familiar organisms such as trees, herbs, bushes, grasses, vines, ferns, mosses, and green algae....
s, as well as some fungi
Fungus

A fungus is a Eukaryote organism that is a member of the Kingdom Fungi . The fungi are a monophyletic group, also called the Eumycota , that is phylogeny distinct from the morphologically similar slime molds and water molds ....
, protist
Protist

Protists ; eukaryote microorganisms. Historically, protists were treated as the kingdom Protista but this group is no longer recognized in modern taxonomy....
s, and possibly some animals. This enzyme transfers electrons directly from ubiquinol to oxygen.

The electron transport pathways produced by these alternative NADH and ubiquinone oxidases have lower ATP
Adenosine triphosphate

This article is about the chemical used by cells as an energy carrier. For other uses, see ATP .Adenosine-5'-triphosphate is a multifunctional nucleotide, and plays an important role in cell biology as a coenzyme that is the "molecule unit of currency" of intracellular energy transfer....
 yields than the full pathway. The advantages produced by a shortened pathway are not entirely clear. However, the alternative oxidase is produced in response to stresses such as cold, reactive oxygen species
Reactive oxygen species

Reactive oxygen species are ions or very small molecules that include oxygen ions, radical , and peroxides, both inorganic and organic peroxide....
 and infection by pathogens, as well as other factors that inhibit the full electron transport chain. Alternative pathways might therefore enhance an organisms' resistance to injury, by reducing oxidative stress
Oxidative stress

Oxidative stress is caused by an imbalance between the production of reactive oxygen species and a biological system's ability to readily detoxify the reactive intermediates or easily repair the resulting damage....
.

Organization of complexes

The original model for how the respiratory chain complexes are organized was that they diffuse freely and independently in the mitochondrial membrane. However, recent data suggest that the complexes might form higher-order structures called supercomplexes or "respirasomes." In this model, the various complexes exist as organized sets of interacting enzymes. These associations might allow channeling of substrates between the various enzyme complexes, increasing the rate and efficiency of electron transfer. Within such mammalian supercomplexes, some components would be present in higher amounts than others, with a ratio between complexes I/II/III/IV and the ATP synthase of approximately 1:1:3:7:4. However, the debate over this supercomplex model is not completely resolved, as some data do not appear to fit with this model.

Prokaryotic electron transport chains

In contrast to the general similarity in structure and function of the electron transport chains in eukaryotes, bacteria
Bacteria

The Bacteria are a large group of unicellular microorganisms. Typically a few micrometres in length, bacteria have a wide range of shapes, ranging from spheres to rods and spirals....
 and archaea
Archaea

The Archaea are a group of single-celled microorganisms. A single individual or species from this domain is called an archaeon . Archaea, like bacteria, are prokaryotic....
 possess a large variety of electron-transfer enzymes. These use an equally wide set of chemicals as substrates. In common with eukaryotes, prokaryotic electron transport uses the energy released from the oxidation of a substrate to pump ions across a membrane and generate an electrochemical gradient. In the bacteria, oxidative phosphorylation in Escherichia coli
Escherichia coli

'Escherichia coli' , is a Gram negative bacterium that is commonly found in the lower gastrointestinal tract of warm-blooded animals. Most E....
 is understood in most detail, while archaeal systems are at present poorly-understood.

The main difference between eukaryotic and prokaryotic oxidative phosphorylation is that bacteria and archaea use many different substances to donate or accept electrons. This allows prokaryotes to grow under a wide variety of environmental conditions. In E. coli, for example, oxidative phosphorylation can be driven by a large number of pairs of reducing agents and oxidizing agents, which are listed below. The midpoint potential
Standard electrode potential

In electrochemistry, the standard electrode potential, abbreviated E? or Eo , is the measure of individual potential of a reversible electrode at standard state, which is with solutes at an effective concentration of 1 moldm-3, and gases at a pressure of 1 bar....
 of a chemical measures how much energy is released when it is oxidized or reduced, with reducing agents having negative potentials and oxidizing agents positive potentials.

Respiratory enzymes and substrates in E. coli.
Respiratory enzymeRedox pair
Redox

Redox describes all chemical reactions in which atoms have their oxidation number changed.This can be either a simple redox process such as the oxidation of carbon to yield carbon dioxide or the reduction of carbon by hydrogen to yield methane , or it can be a complex process such as the oxidation of sugar in the human body through a ser...
 Midpoint potential
Standard electrode potential

In electrochemistry, the standard electrode potential, abbreviated E? or Eo , is the measure of individual potential of a reversible electrode at standard state, which is with solutes at an effective concentration of 1 moldm-3, and gases at a pressure of 1 bar....
  (Volts)
 Formate dehydrogenase
Formate dehydrogenase

Formate dehydrogenases are a set of enzymes that catalyse the oxidation of formate to bicarbonate, donating the electrons to a second substrate, such as Nicotinamide adenine dinucleotide in formate:NAD+ oxidoreductase or to a cytochrome in formate:ferricytochrome-b1 oxidoreductase ....
Bicarbonate
Bicarbonate

In inorganic chemistry, bicarbonate is an intermediate form in the deprotonation of carbonic acid. Its chemical formula is HCO3−....
 / Formate
Formate

Formate or methanoate is the ion CHOO− or HCOO− . It is the simplest carboxylate anion.A formate is a salt or ester of formic acid....
-0.43
 Hydrogenase
Hydrogenase

A hydrogenase is an enzyme that Catalysis the reversible Redox of molecular hydrogen . Hydrogenases play a vital role in Glycolysis.Hydrogen uptake is coupled to the reduction of electron acceptors such as oxygen, nitrate, sulfate, carbon dioxide, and fumarate, whereas proton reduction is essential in pyruvate fermentation and in the di...
Proton
Proton

The proton is a subatomic particle with an electric charge of +1 elementary charge. It is found in the nucleus of each atom but is also stable by itself and has a second identity as the hydrogen ion, H+....
 / Hydrogen
Hydrogen

Hydrogen is the chemical element with atomic number 1. It is represented by the chemical symbol H. At standard temperature and pressure, hydrogen is a colorless, odorless, nonmetallic, tasteless, highly combustion and explosive Diatomic molecule gas with the molecular formula H2....
-0.42
 NADH dehydrogenase
NADH dehydrogenase

NADH dehydrogenase is an enzyme located in the inner mitochondria membrane that catalyzes the transfer of electrons from NADH to coenzyme Q ....
NAD+
Nicotinamide adenine dinucleotide

Nicotinamide adenine dinucleotide, abbreviated NAD+, is a coenzyme found in all living cell s. The compound is a dinucleotide, since it consists of two nucleotides joined through their phosphate groups: with one nucleotide containing an adenine base, and the other containing nicotinamide....
 / NADH
Nicotinamide adenine dinucleotide

Nicotinamide adenine dinucleotide, abbreviated NAD+, is a coenzyme found in all living cell s. The compound is a dinucleotide, since it consists of two nucleotides joined through their phosphate groups: with one nucleotide containing an adenine base, and the other containing nicotinamide....
-0.32
 Glycerol-3-phosphate dehydrogenase
Glycerol-3-phosphate dehydrogenase

Glycerol-3-phosphate dehydrogenase is an enzyme that catalyzes the oxidation of dihydroxyacetone phosphate to sn-glycerol 3-phosphateOlder terms for glycerol-3-phosphate dehydrogenase include alpha glycerol-3-phosphate dehydrogenase and glycerolphosphate dehydrogenase ....
DHAP / Gly-3-P
Glycerol 3-phosphate

Glycerol 3-phosphate should not be confused with the similarly named glycerate 3-phosphate or glyceraldehyde 3-phosphate....
-0.19
 Pyruvate oxidase
Pyruvate dehydrogenase

Pyruvate dehydrogenase complex is a complex of three enzymes that transform pyruvate into acetyl-CoA by a process called pyruvate decarboxylation....
 Acetate
Acetic acid

Acetic acid, CH3COOH, also known as ethanoic acid, is an organic acid which gives vinegar its sour taste and pungent smell. Pure, water-free acetic acid is a colourless liquid that absorbs water from the environment , and freezes at 16.7 Celsius to a colourless crystalline solid....
 + Carbon dioxide
Carbon dioxide

Carbon dioxide is a chemical compound composed of two oxygen atoms covalent bond to a single carbon atom. It is a gas at standard temperature and pressure and exists in Earth's atmosphere in this state....
 / Pyruvate
Pyruvic acid

Pyruvic acid is an organic acid. It is also a ketone. It is the simplest keto acids. The carboxylate ion of pyruvic acid is known as pyruvate....
  
?
 Lactate dehydrogenase
Lactate dehydrogenase

Lactate dehydrogenase is an enzyme present in a wide variety of organisms, including plants and animals....
Pyruvate
Pyruvic acid

Pyruvic acid is an organic acid. It is also a ketone. It is the simplest keto acids. The carboxylate ion of pyruvic acid is known as pyruvate....
 / Lactate
Lactic acid

Lactic acid , also known as milk acid, is a chemical compound that plays a role in several biochemistry processes. It was first isolated in 1780 by a Swedish chemist, Carl Wilhelm Scheele, and is a carboxylic acid with a chemical formula of C3H6O3....
-0.19
 D-amino acid dehydrogenase
D-amino acid dehydrogenase

D-amino-acid dehydrogenase is a bacterial enzyme that catalyses the oxidation of amino acid into their corresponding oxoacids. It contains both flavin and nonheme iron as cofactors....
 2-oxoacid
Oxoacid

An oxoacid is an acid which contains oxygen. More specifically, it is an acid which:#contains oxygen;#contains at least one other Chemical element;...
 + ammonia
Ammonia

Ammonia is a chemical compound with the chemical formula nitrogenhydrogen. It is normally encountered as a gas with a characteristic pungent odor....
 / D-amino acid
Amino acid

In chemistry, an amino acid is a molecule containing both amine and carboxyl functional groups. These molecules are particularly important in biochemistry, where this term refers to alpha-amino acids with the general formula H2NCHRCOOH, where R is an organic substituent....
  
?
 Glucose dehydrogenase
Quinoprotein glucose dehydrogenase

In enzymology, a quinoprotein glucose dehydrogenase is an enzyme that catalysis the chemical reactionThus, the two substrate of this enzyme are D-glucose and ubiquinone, whereas its two product are Glucono delta-lactone and ubiquinol....
Gluconate
Gluconic acid

Gluconic acid is an organic compound with molecular formula C6H12O7 and condensed structural formula chemical formula HOCH24COOH....
 / Glucose
Glucose

Glucose , a monosaccharide also known as grape sugar, blood sugar, or corn sugar, is a very important carbohydrate in biology....
-0.14
 Succinate dehydrogenase
Succinate - coenzyme Q reductase

Succinate-coenzyme Q reductase is an enzyme complex bound to the inner mitochondrial membrane of mammalian and many bacterial cells. It is the only enzyme that participates in both the citric acid cycle and the mammalian, mitochondrial, and bacterial electron transport chain....
Fumarate
Fumaric acid

Fumaric acid is the chemical compound with the formula HO2CCH=CHCO2H. This white crystalline compound is one of two isomeric unsaturated dicarboxylic acids, the other being maleic acid wherein the carboxylic acid groups are cis....
 / Succinate
Succinic acid

Succinic acid is a dicarboxylic acid. Succinate plays a biochemical role in the citric acid cycle....
+0.03
 Ubiquinol oxidase
Ubiquinol oxidase

Ubiquinol oxidases are enzymes in the bacterial electron transport chain that oxidise coenzyme Q into ubiquinone and reduce oxygen to water. These enzymes are one set of the many alternative terminal oxidases in the branched prokaryotic electron transport chain....
Oxygen
Oxygen

Oxygen no O2 produced; 2) O2 produced, but absorbed in oceans & seabed rock; 3) O2 starts to gas out of the oceans, but is absorbed by land surfaces and formation of ozone layer; 4-5) O2 sinks filled and the gas accumulates]]...
 / Water
Water

Water is a common chemical substance that is essential for the survival of all known forms of life. In typical usage, water refers only to its liquid form or States of matter, but the substance also has a solid state, ice, and a gaseous state, water vapor or steam....
+0.82
 Nitrate reductase
Nitrate reductase

Nitrate reductase enzymes are a group of enzymes that reduce nitrate to nitrite.* Nitrate reductase - is a large and complex enzyme with multiple subunits and a mass of ~800 kDa....
Nitrate
Nitrate

In inorganic chemistry, a nitrate is a salt of nitric acid with an ion composed of one nitrogen and three oxygen atoms . In organic chemistry the esters of nitric acid and various alcohols are called nitrates....
 / Nitrite
Nitrite

The nitrite ion is NO2-. The anion is bent, being isoelectronic with ozone. More generally, a nitrite compound is either a Salt or an ester of nitrous acid....
+0.42
 Nitrite reductase
Nitrite reductase

Nitrite reductase refers to any of several classes of enzymes that catalyze the reduction of nitrite. There are two classes of NIR's. A mutlti haem enzyme reduces NO2 to a variety of products....
Nitrite
Nitrite

The nitrite ion is NO2-. The anion is bent, being isoelectronic with ozone. More generally, a nitrite compound is either a Salt or an ester of nitrous acid....
 / Ammonia
Ammonia

Ammonia is a chemical compound with the chemical formula nitrogenhydrogen. It is normally encountered as a gas with a characteristic pungent odor....
+0.36
 Dimethyl sulfoxide reductase
DMSO reductase

DMSO reductase is a molybdenum-containing enzyme capable of reducing dimethyl sulfoxide to dimethyl sulfide . This enzyme serves as the terminal Oxidoreductase under anaerobic conditions in some bacteria, with DMSO being the terminal electron acceptor....
DMSO
Dimethyl sulfoxide

Dimethyl sulfoxide is the chemical compound with the chemical formula 2SO. It was first synthesized in 1866 by the Russian scientist Alexander Saytzeff, who reported his findings in a German chemistry journal in 1867....
 / DMS
Dimethyl sulfide

Dimethyl sulfide or methylthiomethane is an Organosulfur compounds compound with the formula 2S. Dimethyl sulfide is a water-insoluble flammable liquid that boils at 37?C and has a characteristic disagreeable odor....
+0.16
 Trimethylamine N-oxide reductase
Trimethylamine N-oxide reductase

Trimethylamine N-oxide reductase is a microbial enzyme that can reduce trimethylamine N-oxide into trimethylamine , as part of the electron transport chain....
TMAO
Trimethylamine N-oxide

Trimethylamine N-oxide, also known by several other names and acronyms, is the organic compound with the chemical formula 3NO. This colourless solid is usually encountered as the water of crystallization....
 / TMA
Trimethylamine

Trimethylamine is an organic compound with the formula N3. This colorless, hygroscopic, and flammable tertiary amine has a strong "fishy" odor in low concentrations and an ammonia-like odor at higher concentrations....
+0.13
 Fumarate reductase
Fumarate reductase

Fumarate reductase is the enzyme that converts fumaric acid to succinic acid, it is important in microbial metabolism as a means for anaerobic respiration....
Fumarate
Fumaric acid

Fumaric acid is the chemical compound with the formula HO2CCH=CHCO2H. This white crystalline compound is one of two isomeric unsaturated dicarboxylic acids, the other being maleic acid wherein the carboxylic acid groups are cis....
 / Succinate
Succinic acid

Succinic acid is a dicarboxylic acid. Succinate plays a biochemical role in the citric acid cycle....
+0.03


As shown above, E. coli can grow with reducing agents such as formate, hydrogen or lactate as electron donors, and nitrate, DMSO or oxygen as acceptors. The larger the difference in midpoint potential between an oxidizing and reducing agent, the more energy is released when they react. Out of these compounds, the succinate/fumarate pair is unusual, as its midpoint potential is close to zero. Succinate can therefore be oxidized to fumarate if a strong oxidizing agent such as oxygen is available, or fumarate can be reduced to succinate using a strong reducing agent such as formate. These alternative reactions are catalyzed by succinate dehydrogenase
Succinate - coenzyme Q reductase

Succinate-coenzyme Q reductase is an enzyme complex bound to the inner mitochondrial membrane of mammalian and many bacterial cells. It is the only enzyme that participates in both the citric acid cycle and the mammalian, mitochondrial, and bacterial electron transport chain....
 and fumarate reductase
Fumarate reductase

Fumarate reductase is the enzyme that converts fumaric acid to succinic acid, it is important in microbial metabolism as a means for anaerobic respiration....
, respectively.

Some prokaryotes use redox pairs that have only a small difference in midpoint potential. For example, nitrifying
Nitrification

Nitrification is the biological redox of ammonia with oxygen into nitrite followed by the oxidation of these nitrites into nitrates. Degradation of ammonia to nitrite is usually the rate limiting step of nitrification....
 bacteria such as Nitrobacter
Nitrobacter

Nitrobacter is genus of mostly rod-shaped, gram-negative, and chemoautotrophic bacteria.Nitrobacter plays an important role in nitrogen cycle by oxidizing nitrite into nitrate in soil....
 oxidize nitrite to nitrate, donating the electrons to oxygen. The small amount of energy released in this reaction is enough to pump protons and generate ATP, but not enough to produce NADH or NADPH directly for use in anabolism
Anabolism

Anabolism is the set of metabolic pathways that construct molecules from smaller units. These reactions require energy. One way of categorizing metabolic processes, whether at the cell ular, organ or organism level is as 'anabolic' or as 'catabolism', which is the opposite....
. This problem is solved by using a nitrite oxidoreductase
Nitrite oxidoreductase

'Nitrite oxidoreductase' is an enzyme involved in nitrification. It is the last step in the process of aerobic ammonia oxidation, which is carried out by two groups of nitrifying bacteria: ammonia oxidizers such as Nitrosospira, Nitrosomonas and Nitrosococcus convert ammonia to nitrite, while nitrite oxidizers such as Nitrobacter...
 to produce enough proton-motive force to run part of the electron transport chain in reverse, causing complex I to generate NADH.

Prokaryotes control their use of these electron donors and acceptors by varying which enzymes are produced, in response to environmental conditions. This flexibility is possible because different oxidases and reductases use the same ubiquinone pool. This allows many combinations of enzymes to function together, linked by the common ubiquinol intermediate. These respiratory chains therefore have a modular design
Modular design

In systems engineering, modular design ? or "modularity in design" ? is an approach that subdivides a system into smaller parts that can be independently created and then used in different systems to drive multiple functionalities....
, with easily interchangeable sets of enzyme systems.

In addition to this metabolic diversity, prokaryotes also possess a range of isozyme
Isozyme

Isozymes are enzymes that differ in amino acid sequence but catalyze the same chemical reaction. These enzymes usually display different kinetic parameters , or different regulatory properties....
s – different enzymes that catalyze the same reaction. For example, in E. coli there are two different types of ubiquinol oxidase using oxygen as an electron acceptor. Under highly-aerobic conditions, the cell uses an oxidase with a low affinity for oxygen that can transport two protons per electron. However, if levels of oxygen fall, they switch to an oxidase that only transfers one proton per electron, but has a high affinity for oxygen.

ATP synthase (complex V)


ATP synthase, also called complex V, is the final enzyme in the oxidative phosphorylation pathway. This enzyme is found in all forms of life and functions in the same way in both prokaryotes and eukaryotes. The enzyme uses the energy stored in a proton gradient across a membrane to drive the synthesis of ATP from ADP and phosphate
Phosphate

A phosphate, an inorganic chemical, is a Salt of phosphoric acid. Inorganic phosphates are mining to obtain phosphorus for use in agriculture and industry....
 (Pi). Estimates of the number of protons required to synthesise one ATP have ranged from three to four, with some suggesting cells can vary this ratio, to suit different conditions.

  

This phosphorylation
Phosphorylation

Phosphorylation is the addition of a phosphate group to a protein or other organic molecule. Protein phosphorylation in particular plays a significant role in a wide range of cellular processes....
 reaction is an equilibrium
Chemical equilibrium

In a chemical process, chemical equilibrium is the state in which the Activity or concentrations of the reactants and products have no net change over time....
, which can be shifted by altering the proton-motive force. In the absence of a proton-motive force, the ATP synthase reaction will run from right to left, hydrolyzing ATP and pumping protons out of the matrix across the membrane. However, when the proton-motive force is high, the reaction is forced to run in the opposite direction; it proceeds from left to right, allowing protons to flow down their concentration gradient and turning ADP into ATP. Indeed, in the closely related vacuolar type H+-ATPases
V-ATPase

Vacuolar type H+-ATPase is a highly conserved evolutionarily ancient enzyme with remarkably diverse functions in Eukaryote organisms. V-ATPases acidifiy a wide array of intracellular organelles and proton pump across the Cell membrane of numerous cell types....
 the same reaction is used to acidify cellular compartments, by pumping protons and hydrolysing ATP.

ATP synthase is a massive protein complex with a mushroom-like shape. The mammalian enzyme complex contains 16 subunits and has a mass of approximately 600 kilodaltons. The portion embedded within the membrane is called FO and contains a ring of c subunits and the proton channel. The stalk and the ball-shaped headpiece is called F1 and is the site of ATP synthesis. The ball-shaped complex at the end of the F1 portion contains six proteins of two different kinds (three a subunits and three ß subunits), whereas the "stalk" consists of one protein: the ? subunit, with the tip of the stalk extending into the ball of a and ß subunits. Both the a and ß subunits bind nucleotides, but only the ß subunits catalyze the ATP synthesis reaction. Reaching along the side of the F1 portion and back into the membrane is a long rod-like subunit that anchors the a and ß subunits into the base of the enzyme.

As protons cross the membrane through the channel in the base of ATP synthase this causes the FO proton-driven motor to rotate. Rotation might be caused by changes in the ionization
Ionization

Ionization is the physics process of converting an atom or molecule into an ion by adding or removing charged particles such as electrons or other ions....
 of amino acids in the ring of c subunits causing electrostatic interactions that propel the ring of c subunits past the proton channel. This rotating ring in turn drives the rotation of the central axle
Axle

An axle is a central shaft for a rotation wheel or gear. In some cases the axle may be fixed in position with a bearing or bushing sitting inside the hole in the wheel or gear to allow the wheel or gear to rotate around the axle....
 (the ? subunit stalk) within the a and ß subunits. The a and ß subunits are prevented from rotating themselves by the side-arm, which acts as a stator
Stator

The stator is the stationary part of a rotordynamics system, such as in an electric generator or electric motorDepending on the configuration of a spinning electromotive device the stator may act as the field magnet, interacting with the armature to create motion, or it may act as the armature, receiving its influence from moving...
. This movement of the tip of the ? subunit within the ball of a and ß subunits provides the energy for the active sites in the ß subunits to undergo a cycle of movements that produces and then releases ATP. This ATP synthesis reaction is called the binding change mechanism and involves the active site of a ß subunit cycling between three states. In the "open" state, ADP and phosphate enter the active site (shown in brown in the diagram). The protein then closes up around the molecules and binds them loosely – the "loose" state (shown in red). The enzyme then changes shape again and forces these molecules together, with the active site in the resulting "tight" state (shown in pink) binding the newly-produced ATP molecule with very high affinity
Dissociation constant

In chemistry and biochemistry, a dissociation constant is a specific type of equilibrium constant that measures the propensity of a larger object to separate reversibly into smaller components, as...
. Finally, the active site cycles back to the open state, releasing ATP and binding more ADP and phosphate, ready for the next cycle.

In some bacteria and archaea, ATP synthesis is driven by the movement of sodium ions through the cell membrane, rather than the movement of protons. Archaea such as Methanococcus
Methanococcus

In alpha taxonomy, 'Methanococcus' is a genus of the Methanococcaceae.'Methanococcus' is a genus of coccoid methanogens. They are all mesophiles, except the thermophilic M....
 also contain the A1Ao synthase, a form of the enzyme that contains additional proteins with little similarity in sequence to other bacterial and eukaryotic ATP synthase subunits. It is possible that in some species the A1Ao form of the enzyme is a specialized sodium-driven ATP synthase, but this might not be true in all cases.

Reactive oxygen species

Molecular oxygen is an ideal terminal electron acceptor
Electron acceptor

An electron acceptor is a chemical entity that accepts electrons transferred to it from another compound. It is an oxidizing agent that, by virtue of its accepting electrons, is itself reduced in the process....
 because it is a strong oxidizing agent. The reduction of oxygen does involve potentially harmful intermediates. Although the transfer of four electrons and four protons reduces oxygen to water, which is harmless, transfer of one or two electrons produces superoxide
Superoxide

Superoxide is the anion O2−. It is important as the product of the one-electron reduction of dioxygen, which occurs widely in nature....
 or peroxide
Peroxide

A peroxide is a compound containing an oxygen-oxygen chemical bond. The simplest stable peroxide is hydrogen peroxide. Superoxides, dioxygenyls, ozones and ozonides compound are considered separately....
 anions, which are dangerously reactive.

These reactive oxygen species
Reactive oxygen species

Reactive oxygen species are ions or very small molecules that include oxygen ions, radical , and peroxides, both inorganic and organic peroxide....
 and their reaction products, such as the hydroxyl
Hydroxyl

Hydroxyl in chemistry stands for a molecule consisting of an oxygen atom and a hydrogen atom connected by a covalent bond. The neutral form is a hydroxyl Radical and the hydroxyl anion is called a hydroxide....
 radical, are very harmful to cells, as they oxidize proteins and cause mutation
Mutation

In biology, mutations are changes to the nucleotide sequence of the genetic material of an organism. Mutations can be caused by copying errors in the genetic material during cell division, by exposure to ultraviolet or ionizing radiation, chemical mutagens, or virus , or can be induced by the organism, itself, by cellular processes such as s...
s in DNA
DNA

Deoxyribonucleic acid is a nucleic acid that contains the genetics instructions used in the development and functioning of all known living organisms and some viruses....
. This cellular damage might contribute to disease
Disease

A disease or medical condition is an abnormal condition of an organism that impairs bodily functions, associated with specific symptoms and Medical signs....
 and is proposed as one cause of aging.

The cytochrome c oxidase complex is highly efficient at reducing oxygen to water, and it releases very few partly-reduced intermediates; however small amounts of superoxide anion and peroxide are produced by the electron transport chain. Particularly important is the reduction of coenzyme Q
Coenzyme Q

Coenzyme Q10 is a benzoquinone, where Q refers to the quinone chemical group, and 10 refers to the isoprene chemical subunits....
 in complex III, as a highly reactive ubisemiquinone free radical is formed as an intermediate in the Q cycle. This unstable species can lead to electron "leakage" when electrons transfer directly to oxygen, forming superoxide.

To counteract these reactive oxygen species, cells contain numerous antioxidant
Antioxidant

An antioxidant is a molecule capable of slowing or preventing the Redox of other molecules. Oxidation is a chemical reaction that transfers electrons from a substance to an oxidizing agent....
 systems, including antioxidant vitamin
Vitamin

A vitamin is an organic compound required as a nutrient in tiny amounts by an organism. A compound is called a vitamin when it cannot be biosynthesis in sufficient quantities by an organism, and must be obtained from the diet....
s such as vitamin C
Vitamin C

Vitamin C or ascorbic acid is an essential nutrient for humans, a large number of simian species, a small number of other mammalian species , a few species of birds, and some fish....
 and vitamin E
Vitamin E

Vitamin E is the collective name for a set of 8 related a-, ?-, ?-, and d-tocopherols and the corresponding four tocotrienols, which are fat-soluble vitamins with antioxidant properties....
, and antioxidant enzymes such as superoxide dismutase
Superoxide dismutase

The enzyme superoxide dismutase , catalyzes the dismutation of superoxide into oxygen and hydrogen peroxide. As such, it is an important antioxidant defense in nearly all cells exposed to oxygen....
, catalase
Catalase

Catalase is a common enzyme found in nearly all living organisms which are exposed to oxygen, where it functions to catalyst the decomposition of hydrogen peroxide to water and oxygen....
, and peroxidases, which detoxify the reactive species, limiting damage to the cell.

Inhibitors

There are several well-known drug
Drug

A drug, broadly speaking, is any chemical substance that, when absorbed into the body of a living organism, alters normal bodily function....
s and toxin
Toxin

A toxin is a poisonous substance produced by living cells or organisms. For a toxic substance not produced by living organisms, "toxicant" is the more appropriate term, and "toxics" is an acceptable plural....
s that inhibit oxidative phosphorylation. Although any one of these toxins inhibits only one enzyme in the electron transport chain, inhibition of any step in this process will halt the rest of the process. For example, if oligomycin
Oligomycin

Oligomycins are macrolides created by Streptomyces that can be poisonous to other organisms....
 inhibits ATP synthase, protons cannot pass back into the mitochondrion. As a result, the proton pumps are unable to operate, as the gradient becomes too strong for them to overcome. NADH is then no longer oxidized and the citric acid cycle ceases to operate because the concentration of NAD+ falls below the concentration that these enzymes can use.

CompoundsUseEffect on oxidative phosphorylation
Cyanide
Cyanide

A cyanide is any chemical compound that contains the nitrile , which consists of a carbon atom chemical bond to a nitrogen atom. Inorganic cyanides are hydrogen cyanide salts in which cyanide is generally the anion CN-....

Carbon monoxide
Carbon monoxide

Carbon monoxide, with the chemical formula CO, is a colorless and odorless, tasteless, yet highly toxic gas. Its molecules consist of one carbon atom covalent bond to one oxygen atom....
PoisonsInhibit the electron transport chain by binding more strongly than oxygen to the Fe
Iron

Iron is a chemical element with the symbol Fe and atomic number 26. Iron is a Group 8 element and period 4 element. Iron is lustrous and silvery in color....
Cu
Copper

Copper is a chemical element with the symbol Cu and atomic number 29.It is a ductile metal with very high thermal and electrical conductivity....
 center in cytochrome c oxidase, preventing the reduction of oxygen.
Oligomycin
Oligomycin

Oligomycins are macrolides created by Streptomyces that can be poisonous to other organisms....
Antibiotic
Antibiotic

In common usage, an antibiotic is a substance or compound that kills or inhibits the growth of bacteria. Antibiotics belong to the group of antimicrobial compounds used to treat infections caused by microorganisms, including fungus and protozoa....
Inhibits ATP synthase by blocking the flow of protons through the Fo subunit.
CCCP
Carbonyl cyanide m-chlorophenyl hydrazone

Carbonyl cyanide m-chlorophenyl hydrazone , is the biochemistry preparat, an inhibitor of oxidative phosphorylation. It is a nitrile, hydrazone and ionophore....

2,4-Dinitrophenol
2,4-Dinitrophenol

2,4-Dinitrophenol , carbon6hydrogen4Nitrogen2Oxygen5, is a cell metabolism poison. It uncouples oxidative phosphorylation by carrying protons across the mitochondrium membrane, leading to a rapid consumption of energy without generation of adenosine triphosphate....
Poisons Ionophore
Ionophore

An ionophore is a lipid-soluble molecule usually synthesized by microorganisms to transport ions across the lipid bilayer of the cell membrane....
s that disrupt the proton gradient by carrying protons across a membrane. This ionophore uncouples proton pumping from ATP synthesis because it carries protons across the inner mitochondrial membrane.
Rotenone
Rotenone

Rotenone is an odorless chemical that is used as a broad-spectrum insecticide, piscicide, and pesticide. It occurs naturally in the roots and stems of several plants such as the jicama vine plant....
Pesticide
Pesticide

A pesticide is a substance or mixture of substances used to kill a pest .A pesticide may be a chemical substance, biological agent , antimicrobial, disinfectant or device used against any pest ....
Prevents the transfer of electrons from complex I to ubiquinone by blocking to the ubiquinone-binding site.
Malonate
Malonate

The malonate or propanedioate ion is carbonHydrogen222− . Malonate chemical compound include salts and esters of malonic acid, such as...
 and oxaloacetate
Competitive inhibitors of succinate dehydrogenase (complex II).


Not all inhibitors of oxidative phosphorylation are toxins. In brown adipose tissue
Brown adipose tissue

Brown adipose tissue or brown fat is one of the two types of adipose tissue that is present in many newborn or hibernation mammals. Its primary function is to generate body heat....
, regulated proton channels called uncoupling protein
Uncoupling protein

An uncoupling protein is a mitochondrial inner membrane protein that can dissipate the proton gradient before it can be used to provide the energy for oxidative phosphorylation....
s can uncouple respiration from ATP synthesis. This rapid respiration produces heat, and is particularly important as a way of maintaining body temperature for hibernating
Hibernation

Hibernation is a state of inactivity and Metabolism depression in animals, characterized by lower body temperature, slower breathing, and lower metabolic rate....
 animals, although these proteins may also have a more general function in cells' responses to stress.

History

The field of oxidative phosphorylation began with the report in 1906 by Arthur Harden
Arthur Harden

Arthur Harden was an England biochemist. He shared the Nobel Prize in Chemistry in 1929 with Hans Karl August Simon von Euler-Chelpin for their investigations into the fermentation of sugar and fermentative enzymes....
 of a vital role for phosphate in cellular fermentation
Fermentation (biochemistry)

Fermentation is the process of deriving energy from the Redox of organic compounds, such as carbohydrates, using an Endogeny electron acceptor, which is usually an organic compound....
, but initially only sugar phosphates
Sugar phosphates

Sugar phosphates are often used in biological systems to store or transfer energy.Examples include:* Dihydroxyacetonephosphate* Glucose-6-phosphate...
 were known to be involved. However, in the early 1940s, the link between the oxidation of sugars and the generation of ATP was firmly established by Herman Kalckar
Herman Kalckar

Herman Moritz Kalckar was a Danish biochemist who pioneered the study of cellular respiration. He trained as a medical doctor at the University of Copenhagen but later moved to America, becoming a professor of biology at Johns Hopkins University....
, confirming the central role of ATP in energy transfer that had been proposed by Fritz Albert Lipmann
Fritz Albert Lipmann

Fritz Albert Lipmann was a German-American biochemist and a co-discoverer in 1945 of coenzyme A. For this, together with other research on coenzyme A, he was awarded half the Nobel Prize in Physiology or Medicine in 1953....
 in 1941. Later, in 1949, Morris Friedkin and Albert L. Lehninger
Albert L. Lehninger

Albert Lester Lehninger was an United States biochemist, and is widely regarded as a pioneer in the field of Biological thermodynamics. He made fundamental contributions to the current understanding of metabolism at a molecular level....
 proved that the coenzyme NADH linked metabolic pathways such as the citric acid cycle and the synthesis of ATP.

For another twenty years, the mechanism by which ATP is generated remained mysterious, with scientists searching for an elusive "high-energy intermediate" that would link oxidation and phosphorylation reactions. This puzzle was solved by Peter D. Mitchell
Peter D. Mitchell

Peter Dennis Mitchell was a British biochemist who was awarded the 1978 Nobel Prize for Chemistry for his discovery of the chemiosmotic mechanism of adenosine triphosphate synthesis....
 with the publication of the chemiosmotic theory in 1961. At first, this proposal was highly controversial, but it was slowly accepted and Mitchell was awarded a Nobel prize
Nobel Prize

The Nobel Prize , established in the 1895 will of Swedish chemist Alfred Nobel; it was first awarded in Nobel Prize in Physics, Nobel Prize in Chemistry, Nobel Prize in Physiology or Medicine, Nobel Prize in Literature, and Nobel Peace Prize in 1901....
 in 1978. Subsequent research concentrated on purifying and characterizing the enzymes involved, with major contributions being made by David E. Green
David E. Green

David Ezra Green was an America biochemist who made huge contributions to the study of enzymes, particularly the electron transport chain and oxidative phosphorylation....
 on the complexes of the electron-transport chain, as well as Efraim Racker
Efraim Racker

Efraim Racker was an Austrian biochemist who was responsible for identifying and purifying Factor 1 , the first part of the ATP synthase enzyme to be characterised....
 on the ATP synthase. A critical step towards solving the mechanism of the ATP synthase was provided by Paul D. Boyer
Paul D. Boyer

Paul Delos Boyer is an United States biochemist. He is one of the laureates for the 1997 Nobel Prize in Chemistry for his research on the "enzymatic mechanism underlying the synthesis of adenosine triphosphate "....
, by his development in 1973 of the "binding change" mechanism, followed by his radical proposal of rotational catalysis in 1982. More recent work has included structural studies
X-ray crystallography

X-ray crystallography is a method of determining the arrangement of atoms within a crystal, in which a beam of X-rays strikes a crystal and scatters into many different directions....
 on the enzymes involved in oxidative phosphorylation by John E. Walker
John E. Walker

John Ernest Walker is an England chemistry who won the Nobel Prize in Chemistry in 1997. He is currently the director of the MRC Dunn Human Nutrition Unit in Cambridge....
, with Walker and Boyer being awarded a Nobel Prize in 1997.

Further reading

Introductory Advanced

External links

General resources
  • Wiley and Co
    John Wiley & Sons

    John Wiley & Sons, Inc., also referred to as Wiley, is a global publishing company that markets its products to professionals and consumers, students and instructors in higher education, and researchers and practitioners in scientific, technical, medical, and scholarly fields....
     Concepts in Biochemistry
  • Metabolic Pathways of Biochemistry, the online reference of metabolism for students and teachers, at George Washington University
    George Washington University

    The George Washington University is a Private university, Mixed-sex education university located in Washington, D.C. The school was chartered on February 9, 1821 as The Columbian College in the District of Columbia by an Act of Congress and since that time has developed into a nonsectarian research institution....
  • Brief introduction, including videos of microscope images of the enzyme rotating, at Tokyo Institute of Technology
    Tokyo Institute of Technology

    , usually called or less commonly Tokyo Tech, TiTech for short, is the largest institution of higher learning in Japan dedicated to science and technology....
  • Antony Crofts, University of Illinois at Urbana-Champaign
    University of Illinois at Urbana-Champaign

    The University of Illinois at Urbana-Champaign is a public university research university in the state of Illinois, United States. It is the oldest and largest campus in the University of Illinois system....


Structural resources
  • Hongyun Wang and George Oster, University of California, Berkeley
    University of California, Berkeley

    The University of California, Berkeley is a public university research university located in Berkeley, California, California, United States. The oldest of the ten major campuses affiliated with the University of California, Berkeley offers some 300 undergraduate and graduate degree programs in a wide range of disciplines....
  • PDB
    Protein Data Bank

    The Protein Data Bank is a repository for the 3-D structural data of large biological molecules, such as proteins and nucleic acids. . The data, typically obtained by X-ray crystallography or Protein NMR and submitted by biologists and biochemistry from around the world, are released into the public domain, and can be accessed at no charge...
     molecule of the month:
  • Interactive molecular models at Universidade Fernando Pessoa: