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Beta oxidation



 
 
Beta oxidation is the process by which fatty acid
Fatty acid

In chemistry, especially biochemistry, a fatty acid is a carboxylic acid often with a long unbranched aliphatic tail , which is either saturation or Unsaturated compound....
s, in the form of Acyl-CoA
Acyl-CoA

Acyl-CoA is a coenzyme involved in the metabolism of fatty acids. It is a temporary compound formed when coenzyme A attaches to the end of a long-chain fatty acid, inside living cells....
 molecules, are broken down in mitochondria and/or in peroxisome
Peroxisome

Peroxisomes are organelles from the Microbody family and are present in almost any eukaryote cell. They participate in the metabolism of fatty acids and many other metabolites....
s to generate Acetyl-CoA
Acetyl-CoA

Acetyl-CoA is an important molecule in metabolism, used in many biochemical reactions. Its main use is to convey the carbon atoms within the acetyl group to the citric acid cycle to be oxidation for energy production....
, the entry molecule for the Krebs cycle.

fatty acids can penetrate the plasma membrane due to their poor water solubility and high fat solubility.






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Lchad Deficiency
Beta oxidation is the process by which fatty acid
Fatty acid

In chemistry, especially biochemistry, a fatty acid is a carboxylic acid often with a long unbranched aliphatic tail , which is either saturation or Unsaturated compound....
s, in the form of Acyl-CoA
Acyl-CoA

Acyl-CoA is a coenzyme involved in the metabolism of fatty acids. It is a temporary compound formed when coenzyme A attaches to the end of a long-chain fatty acid, inside living cells....
 molecules, are broken down in mitochondria and/or in peroxisome
Peroxisome

Peroxisomes are organelles from the Microbody family and are present in almost any eukaryote cell. They participate in the metabolism of fatty acids and many other metabolites....
s to generate Acetyl-CoA
Acetyl-CoA

Acetyl-CoA is an important molecule in metabolism, used in many biochemical reactions. Its main use is to convey the carbon atoms within the acetyl group to the citric acid cycle to be oxidation for energy production....
, the entry molecule for the Krebs cycle.

Activation of fatty acids

Free fatty acids can penetrate the plasma membrane due to their poor water solubility and high fat solubility. Once in the cytosol, a fatty acid reacts with ATP
Adenosine triphosphate

This article is about the chemical used by cells as an energy carrier. For other uses, see ATP .Adenosine-5'-triphosphate is a multifunctional nucleotide, and plays an important role in cell biology as a coenzyme that is the "molecule unit of currency" of intracellular energy transfer....
 to give a fatty acyl adenylate, plus inorganic pyrophosphate. This reactive acyl adenylate then reacts with free coenzyme A
Coenzyme A

Coenzyme A is a coenzyme, notable for its role in the Fatty acid metabolism#Synthesis and Fatty acid metabolism#.CE.B2-Oxidation of fatty acids, and the oxidation of pyruvic acid in the citric acid cycle....
 to give a fatty acyl-CoA ester plus AMP
Adenosine monophosphate

Adenosine monophosphate , also known as 5'-adenylic acid, is a nucleotide that is found in RNA. It is an ester of phosphoric acid and the nucleoside adenosine....
.

Four recurring steps

Once inside the mitochondria, the ß-oxidation of fatty acids occurs via four recurring steps:

Description Diagram Enzyme End product >- | Oxidation by FAD: The first step is the oxidation of the fatty acid by Acyl-CoA-Dehydrogenase. The enzyme catalyzes the formation of a double bond between the C-2 and C-3. acyl CoA dehydrogenase
Acyl CoA dehydrogenase

Acyl-CoA dehydrogenases are a class of enzymes which function to catalyze the initial step in each cycle of fatty acid ? -oxidation in the mitochondria of cells....
 
2-enoyl-CoA >- | Hydration
Hydration

Hydration may refer to:* Hydration reaction, a chemical addition reaction* Mineral hydration, an inorganic chemical reaction where water is added to the crystal structure of a mineral...
:
The next step is the hydration
Hydration reaction

In organic chemistry, a hydration reaction is a chemical reaction in which a hydroxyl group and a hydrogen cation are added to the two carbon atoms covalent bonded together in the carbon-carbon double bond which makes up an alkene functional group....
 of the bond between C-2 and C-3. The reaction is stereospecific, forming only the L isomer
Isomer

In chemistry, isomers are compounds with the same molecular formula but different structural formulae. Isomers do not necessarily share similar properties unless they also have the same functional groups....
.
enoyl CoA hydratase - | Oxidation by NAD+: The third step is the oxidation of L-ß-hydroxyacyl CoA by NAD+. This converts the hydroxyl
Hydroxyl

Hydroxyl in chemistry stands for a molecule consisting of an oxygen atom and a hydrogen atom connected by a covalent bond. The neutral form is a hydroxyl Radical and the hydroxyl anion is called a hydroxide....
 group into a keto
Keto

Keto can refer to:* The Keto people, an ethnic group of the Siberian North.* The Ketone, the functional group in the chemical compounds ketones....
 group.
L-ß-hydroxyacyl CoA dehydrogenase - | Thiolysis
Thiolysis

Thiolysis is a reaction with a thiol that cleaves one compound into two. This reaction is similar to hydrolysis, which involves water instead of a thiol. This reaction is seen in beta-oxidation of fatty acids....
:
The final step is the cleavage of ß-ketoacyl CoA by the thiol
Thiol

In organic chemistry, a thiol is a compound that contains the functional group composed of a sulfur atom and a hydrogen atom . Being the sulfur analogue of an alcohol group , this functional group is referred to either as a thiol group or a sulfhydryl group....
 group of another molecule of CoA
COA

COA can refer to:*Cambridge Occupational Analysts*Cash on Arrival *Cause of action*CedarOpenAccounts COA *Center of Attention*Certificate of Approval for marriage or civil partnership in the United Kingdom...
. The thiol is inserted between C-2 and C-3.
ß-ketothiolase An acetyl CoA molecule, and an acyl CoA molecule, which is two carbons shorter


This process continues until the entire chain is cleaved into acetyl CoA units. The final cycle produces two separate acetyl CoA's, instead of one acyl CoA and one acetyl CoA. For every cycle, the Acyl CoA unit is shortened by two carbon atoms. Concomitantly, one molecule of FADH2, NADH and acetyl CoA are formed.

ß-oxidation of unsaturated fatty acids

ß-oxidation of unsaturated fatty acids poses a problem since the location of a cis bond can prevent the formation of a trans-?2 bond. These situations are handled by an additional two enzymes.

Whatever the conformation of the hydrocarbon chain, ß-oxidation occurs normally until the acyl CoA (because of the presence of a double bond) is not an appropriate substrate for acyl CoA dehydrogenase, or enoyl CoA hydratase:

  • If the acyl CoA contains a cis-?3 bond, then cis-?3-Enoyl CoA isomerase
    Enoyl CoA isomerase

    Enoyl CoA isomerase or dodecenoyl-coenzyme A delta-isomerase is an enzyme that catalyzes conversion of cis-double bonds of fatty acids at position 3 to trans double bonds at position 2....
     will convert the bond to a trans-?2 bond, which is a regular substrate.


  • If the acyl CoA contains a cis-?4 double bond, then its dehydrogenation yields a 2,4-dienoyl intermediate, which is not a substrate for enoyl CoA hydratase. However, the enzyme 2,4 Dienoyl CoA reductase reduces the intermediate, using NADPH, into trans-?3-enoyl CoA. As in the above case, this compound is converted into a suitable intermediate by 3,2-Enoyl CoA isomerase.


To summarize:
  • odd numbered double bonds are handled by the isomerase.
  • even numbered double bonds by the reductase (which creates an odd numbered double bond) and the isomerase.


ß-oxidation of odd-numbered chains

Fatty acids with an odd number of carbon are generally found in the lipids of plants and some marine organisms. Many ruminant animals form large amount of 3-carbon propionate during fermentation of carbohydrate in rumen.

Chains with an odd-number of carbon
Carbon

Carbon is a chemical element with chemical symbol C and atomic number 6. As a member of group 14 on the periodic table, it is nonmetallic and tetravalence?making four electrons available to form covalent bond chemical bonds....
s are oxidized in the same manner as even-numbered chains, but the final products are propionyl-CoA
Propionyl-CoA

Propionyl-CoA is a coenzyme A derivative of propionic acid....
 and acetyl-CoA
Acetyl-CoA

Acetyl-CoA is an important molecule in metabolism, used in many biochemical reactions. Its main use is to convey the carbon atoms within the acetyl group to the citric acid cycle to be oxidation for energy production....
.

Propionyl-CoA is first carboxylated using a bicarbonate
Bicarbonate

In inorganic chemistry, bicarbonate is an intermediate form in the deprotonation of carbonic acid. Its chemical formula is HCO3−....
 ion
Ion

An ion is an atom or molecule which has lost or gained one or more electrons, giving it a positive or negative electrical charge. According to the Bohr_model this will be from or in the outer shield 'n'....
 into D-stereoisomer of methymalonyl-CoA, in a reaction that involves a biotin
Biotin

Biotin, also known as vitamin H or B7, has the chemical formula C10H16N2O3S , is a water-soluble B-complex vitamin which is composed of an ureido ring fused with a tetrahydrothiophene ring....
 co-factor
Cofactor (biochemistry)

A cofactor is a non-protein chemical compound that is bound to an enzyme and is required for catalysis. They can be considered "helper molecules/ions" that assist in biochemical transformations....
, ATP, and the enzyme propionyl-CoA carboxylase
Propionyl-CoA carboxylase

Propionyl-CoA carboxylase catalyses the carboxylation reaction of propionyl CoA. The product of the reaction is D-methylmalonyl CoA. ATP + propanoyl-CoA + HCO3- ADP + phosphate + -methylmalonyl-CoA...
. The bicarbonate ion's carbon is added to the middle carbon of propionyl-CoA, forming a D-methylmalonyl-CoA. However, the D conformation is enzymatically converted into the L conformation by methylmalonyl-CoA epimerase, then it undergoes intramolecular rearrangement which is catalyzed by methylmalonyl-CoA mutase
Mutase

An enzyme that catalyzes the shifting of a functional group from one position to another within the same molecule. Examples of this are bisphosphoglycerate mutase, which appears in red blood cells and phosphoglycerate mutase which acts in glycolysis....
(requires coenzyme-B12 as it's coenzyme) to form succinyl-CoA. The succinyl-CoA formed can then enter the citric acid cycle.

Because it cannot be completely metabolized in the citric acid cycle, the products of its partial reaction must be removed in a process called cataplerosis. This allows regeneration of the citric acid cycle intermediates, possibly an important process in certain metabolic diseases.

Oxidation in peroxisomes

Fatty acid oxidation also occurs in peroxisome
Peroxisome

Peroxisomes are organelles from the Microbody family and are present in almost any eukaryote cell. They participate in the metabolism of fatty acids and many other metabolites....
s, when the fatty acid chains are too long to be handled by the mitochondria. However, the oxidation ceases at octanyl CoA. It is believed that very long chain (greater than C-22) fatty acids undergo initial oxidation in peroxisomes which is followed by mitochondrial oxidation.

One significant difference is that oxidation in peroxisomes is not coupled to ATP
Adenosine triphosphate

This article is about the chemical used by cells as an energy carrier. For other uses, see ATP .Adenosine-5'-triphosphate is a multifunctional nucleotide, and plays an important role in cell biology as a coenzyme that is the "molecule unit of currency" of intracellular energy transfer....
 synthesis. Instead, the high-potential electrons are transferred to O2, which yields H2O2. The enzyme catalase
Catalase

Catalase is a common enzyme found in nearly all living organisms which are exposed to oxygen, where it functions to catalyst the decomposition of hydrogen peroxide to water and oxygen....
, found exclusively in peroxisomes, converts the hydrogen peroxide
Hydrogen peroxide

Hydrogen peroxide is a very pale blue liquid which appears colorless in a dilute solution, slightly more viscous than water. It is a weak acid....
 into water
Water

Water is a common chemical substance that is essential for the survival of all known forms of life. In typical usage, water refers only to its liquid form or States of matter, but the substance also has a solid state, ice, and a gaseous state, water vapor or steam....
 and oxygen
Oxygen

Oxygen no O2 produced; 2) O2 produced, but absorbed in oceans & seabed rock; 3) O2 starts to gas out of the oceans, but is absorbed by land surfaces and formation of ozone layer; 4-5) O2 sinks filled and the gas accumulates]]...
.

Peroxisomal ß-oxidation also requires enzymes specific to the peroxisome and to very long fatty acids. There are three key differences between the enzymes used for mitochondrial and peroxisomal ß-oxidation:
  1. ß-oxidation in the peroxisome requires the use of a peroxisomal carnitine acyltransferase (instead of carnitine acyltransferase I and II used by the mitochondria) for transport of the activated acyl group into the peroxisome.
  2. The first oxidation step in the peroxisome is catalyzed by the enzyme acyl CoA oxidase
    Acyl-CoA oxidase

    In enzymology, an acyl-CoA oxidase is an enzyme that catalysis the chemical reactionThus, the two substrate of this enzyme are acyl-CoA and oxygen, whereas its two product are trans-2,3-dehydroacyl-CoA and hydrogen peroxide....
    .
  3. The ß-ketothiolase used in peroxisomal ß-oxidation has an altered substrate specificity, different from the mitochondrial ß-ketothiolase.


Peroxisomal oxidation is induced by high fat diet and administration of hypolipidemic drugs like clofibrate.

Energy yield

The ATP yield for every oxidation cycle is 14 ATP (according to the P/O ratio), broken down as follows:

Source ATP Total >- | 1 FADH2 x 1.5 ATP - | 1 NADH x 2.5 ATP - | 1 acetyl CoA x 10 ATP - | TOTAL = 14 ATP


For an even-numbered saturated fat (C2n), n - 1 oxidations are necessary and the final process yields an additional acetyl CoA. In addition, two equivalents of ATP
Adenosine triphosphate

This article is about the chemical used by cells as an energy carrier. For other uses, see ATP .Adenosine-5'-triphosphate is a multifunctional nucleotide, and plays an important role in cell biology as a coenzyme that is the "molecule unit of currency" of intracellular energy transfer....
 are lost during the activation of the fatty acid. Therefore, the total ATP yield can be stated as:

* 14 + 10 - 2 = total ATP

For instance, the ATP yield of palmitate (C16, n = 8) is:

* 14 + 10 - 2 = 106 ATP

Represented in table form:

Source ATP Total >- | 7 FADH2 x 1.5 ATP - | 7 NADH x 2.5 ATP - | 8 acetyl CoA x 10 ATP - | Activation - | TOTAL = 106 ATP


For sources that use the larger ATP production numbers described above, the total would be 129 ATP equivalents per palmitate.

Beta-oxidation of unsaturated fatty acids changes the ATP yield due to the requirement of two possible additional enzymes. If a cis-/carnitine1.html Animations] at brookscole.com