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Collagen



 
 
Collagen is the main protein
Protein

Proteins are organic compounds made of amino acids arranged in a linear chain and joined together by peptide bonds between the carboxyl and amino groups of adjacent amino acid Residue ....
 of connective tissue
Connective tissue

Connective tissue is a form of fibrous biological tissue.It is one of the four types of tissue in traditional classifications .Collagen is the main protein of connective tissue in animals and the most abundant protein in mammals, making up about 25% of the total protein content....
 in animal
Animal

Animals are a major group of multicellular, eukaryotic organisms of the Kingdom Animalia or Metazoa. Their body plan eventually becomes fixed as they develop, although some undergo a process of metamorphosis later on in their life....
s and the most abundant protein in mammal
Mammal

Mammals are a class of vertebrate animals whose name is derived from their distinctive feature, mammary glands, with which they feed their young....
s, making up about 25% to 35% of the whole-body protein content. In muscle tissue it serves as a major component of endomysium
Endomysium

The endomysium, literally meaning within the muscle, is a layer of connective tissue that ensheaths a muscle fiber and is composed mostly from reticular fibers....
. Collagen constitutes 1% to 2% of muscle tissue, and accounts for 6% of the weight of strong, tendinous muscles.






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Collagentriplehelix
Collagen is the main protein
Protein

Proteins are organic compounds made of amino acids arranged in a linear chain and joined together by peptide bonds between the carboxyl and amino groups of adjacent amino acid Residue ....
 of connective tissue
Connective tissue

Connective tissue is a form of fibrous biological tissue.It is one of the four types of tissue in traditional classifications .Collagen is the main protein of connective tissue in animals and the most abundant protein in mammals, making up about 25% of the total protein content....
 in animal
Animal

Animals are a major group of multicellular, eukaryotic organisms of the Kingdom Animalia or Metazoa. Their body plan eventually becomes fixed as they develop, although some undergo a process of metamorphosis later on in their life....
s and the most abundant protein in mammal
Mammal

Mammals are a class of vertebrate animals whose name is derived from their distinctive feature, mammary glands, with which they feed their young....
s, making up about 25% to 35% of the whole-body protein content. In muscle tissue it serves as a major component of endomysium
Endomysium

The endomysium, literally meaning within the muscle, is a layer of connective tissue that ensheaths a muscle fiber and is composed mostly from reticular fibers....
. Collagen constitutes 1% to 2% of muscle tissue, and accounts for 6% of the weight of strong, tendinous muscles. The gelatin
Gelatin

Gelatin is a translucent, colorless, brittle, nearly tasteless solid, derived from the collagen inside animals' skin and mostly bones. It has been commonly used as a gelling agent in food, pharmaceutical, photography, and cosmetic manufacturing....
 used in food and industry is derived from the partial hydrolysis of collagen.

Uses

Collagen is one of the long, fibrous structural proteins
Fibrous protein

Scleroproteins are one of the two main classes of protein tertiary structure .They are also called fibrous proteins....
 whose functions are quite different from those of globular protein
Globular protein

Globular proteins, or spheroproteins are one of the two main protein classes, comprising sphere-like proteins that are more or less soluble in aqueous solution ....
s such as enzyme
Enzyme

Enzymes are biomolecules that catalysis chemical reactions. Almost all enzymes are proteins. In enzymatic reactions, the molecules at the beginning of the process are called Substrate , and the enzyme converts them into different molecules, the products....
s. Tough bundles of collagen called collagen fibers are a major component of the extracellular matrix
Extracellular matrix

In biology, the extracellular matrix is the extracellular part of animal tissue that usually provides structural support to the animal Cell in addition to performing various other important functions....
 that supports most tissues and gives cells structure from the outside, but collagen is also found inside certain cells. Collagen has great tensile strength
Tensile strength

Tensile strength , or is the Stress at which a material breaks or permanently deforms. Tensile strength is an Intensive and extensive properties and, consequently, does not depend on the size of the test specimen....
, and is the main component of fascia
Fascia

Fascia , pl. fas?ci?ae , adj. fascial is the soft tissue component of the connective tissue system that permeates the human body....
, cartilage
Cartilage

Cartilage is a type of dense connective tissue. It is composed of specialized cells called chondrocyte that produce a large amount of extracellular matrix composed of collagen fibers, abundant ground substance rich in proteoglycan, and elastin fibers....
, ligament
Ligament

Ligaments connect bone to bone. In anatomy, the term ligament is used to denote three different types of structures:# Fibrous Tissue that connects bones to other bones....
s, tendon
Tendon

A tendon is a tough band of fibrous connective tissue that usually connects muscle to bone and is capable of withstanding tension . Tendons are similar to ligaments except that ligaments join one bone to another....
s, bone
Bone

Bones are rigid organ that form part of the endoskeleton of vertebrates. They function to move, support, and protect the various organs of the body, produce red blood cell and white blood cells and store minerals....
 and skin. Along with soft keratin
Keratin

Keratins are a family of fibrous protein; tough and insoluble, they form the hard but mineral structures found in reptiles, birds, amphibians and mammals....
, it is responsible for skin
Skin

The skin is the outer covering of the body, also known as the epidermis. It is the largest organ of the integumentary system made up of multiple layers of epithelial biological tissue, and guards the underlying muscles, bones, ligaments and organ s....
 strength and elasticity, and its degradation leads to wrinkle
Wrinkle

File:Old Bangladeshi drinking tea cropped.jpgA wrinkle is a fold, ridge or crease in the skin. Skin wrinkles typically appear as a result of aging processes such as glycation or, temporarily, as the result of prolonged immersion in water....
s that accompany aging
Ageing

Ageing or aging is the accumulation of changes in an organism or object over time. Aging in humans refers to a multidimensional process of physical, psychological, and social change....
. It strengthens blood vessel
Blood vessel

The blood vessels are the part of the circulatory system that transport blood throughout the body. There are three major types of blood vessels: the artery, which carry the blood away from the heart, the capillary, which enable the actual exchange of water and chemicals between the blood and the tissues; and the veins, which carry blood from...
s and plays a role in tissue
Biological tissue

Tissue is a cellular organizational level intermediate between cells and a complete organism. Hence, a tissue is an ensemble of cells, not necessarily identical, but from the same origin, that together carry out a specific function....
 development. It is present in the cornea
Cornea

The cornea is the transparency front part of the eye that covers the Iris , pupil, and anterior chamber. Together with the cilliary muscles, the cornea reflects light, and as a result helps the eye to dilate, accounting for approximately two-thirds of the eye's total optical power....
 and lens of the eye
Eye

Eyes are Organ that detect light, and send signals along the optic nerve to the visual system and other areas of the brain. Complex optical systems with resolving power have come in ten fundamentally different forms, and 96% of animal species possess a complex optical system....
 in crystal
Crystal

A crystal or crystalline solid is a solid material whose constituent atoms, molecules, or ions are arranged in an orderly repeating pattern extending in all three spatial dimensions....
line form. It is also used in cosmetic surgery
Plastic surgery

Plastic surgery is a medical :Category:Surgical specialties concerned with the correction or restoration of form and function. While famous for aesthetic surgery, plastic surgery also includes a variety of fields such as craniofacial surgery, hand surgery, burn surgery, microsurgery, and reconstructive surgery....
 and burns surgery
Burn (injury)

A burn is a type of injury that may be caused by heat, Temperature, electricity, chemicals, light, radiation, or friction. Burns can be highly variable in terms of the tissue affected, the severity, and resultant complications....
. Hydrolyzed collagen can play an important role in weight management, as a protein, it can be advantageously used for its satiating power.

Industrial uses

If collagen is sufficiently hydrolyzed
Hydrolysis

Hydrolysis is a chemical reaction during which one or more water are split into hydrogen and hydroxide ions which may go on to participate in further reactions....
, the three tropocollagen strands separate partially or completely into globular domains, containing a different secondary structure to the normal collagen polyproline II (PPII), e.g. random coil
Random coil

A random coil is a polymer conformation where the monomer subunits are oriented randomness while still being chemical bond to graph units. It is not one specific shape, but a statistics distribution of shapes for all the chains in a statistical population of macromolecules....
s. This process describes the formation of gelatin
Gelatin

Gelatin is a translucent, colorless, brittle, nearly tasteless solid, derived from the collagen inside animals' skin and mostly bones. It has been commonly used as a gelling agent in food, pharmaceutical, photography, and cosmetic manufacturing....
, which is used in many food
Food

Food is any substance, usually composed of carbohydrates, fats, proteins and water, that can be Eating or Drinking by an animal or human for nutrition or pleasure....
s, including flavored gelatin dessert
Gelatin dessert

The most common culinary use for gelatin is as a main ingredient in varieties of gelatin desserts. Unprepared gelatin for desserts is often marketed as a flavored powder or concentrated gelatinous solid....
s. Besides food, gelatin has been used in pharmaceutical, cosmetic, and photography industries. From a nutritional point of view, collagen and gelatin are a poor-quality sole source of protein since they do not contain all the essential amino acid
Essential amino acid

File:BakedFish.jpgAn essential amino acid or indispensable amino acid is an amino acid that cannot be synthesized de novo synthesis by the organism , and therefore must be supplied in the diet....
s in the proportions that the human body requires—they are not 'complete protein
Complete protein

A complete protein is a source of protein that contains an adequate proportion of all of the essential amino acids for the dietary needs of humans or other animals....
s' (as defined by food science, not that they are partially structured. Manufacturers of collagen-based dietary supplement
Dietary supplement

A dietary supplement, also known as food supplement or nutritional supplement, is a preparation intended to provide nutrients, such as vitamins, Dietary minerals, fatty acids or amino acids, that are missing or are not consumed in sufficient quantity in a person's diet ....
s claim that their products can improve skin and fingernail quality as well as joint health. However, mainstream scientific research has not shown strong evidence to support these claims. Individuals with problems in these areas are more likely to be suffering from some other underlying condition (such as normal aging, dry skin, arthritis etc.) rather than just a protein deficiency.

From the Greek for glue, kolla, the word collagen means "glue
Animal glue

An animal glue is an adhesive that is created by prolonged boiling of animal connective tissue.These protein colloid glues are formed through hydrolysis of the collagen from skins, bones, tendons, and other tissues, similar to gelatin....
 producer" and refers to the early process of boiling the skin and sinews
Tendon

A tendon is a tough band of fibrous connective tissue that usually connects muscle to bone and is capable of withstanding tension . Tendons are similar to ligaments except that ligaments join one bone to another....
 of horse
Horse

The horse is a hoofed mammal, a subspecies of one of seven extant species of the family Equidae. The horse has evolution of the horse over the past 45 to 55 million years from a small multi-toed creature into the large, odd-toed ungulate animal of today....
s and other animals to obtain glue. Collagen adhesive was used by Egypt
Egypt

Egypt is a country mainly in North Africa, with the Sinai Peninsula forming a land bridge in Western Asia. Covering an area of about , Egypt borders the Mediterranean Sea to the north, the Gaza Strip and Israel to the northeast, the Red Sea to the east, Sudan to the south and Libya to the west....
ians about 4,000 years ago, and Native Americans
Native Americans in the United States

Native Americans in the United States are the Indigenous peoples of the Americas from the regions of North America now encompassed by the continental United States United States, including parts of Alaska and the island state of Hawaii....
 used it in bows
Bow (weapon)

A bow is a weapon that projects arrows powered by the elasticity of the bow. Essentially, it is a form of Spring . As the bow is drawn, energy is stored in the limbs of the bow and transformed into rapid motion when the string is released, with the string transferring this force to the arrow....
 about 1,500 years ago. The oldest glue in the world, carbon-dated
Radiocarbon dating

Radiocarbon dating, or carbon dating, is a radiometric dating method that uses the naturally occurring radioisotope carbon-14 to determine the age of carbonaceous materials up to about 60,000 years....
 as more than 8,000 years old, was found to be collagen—used as a protective lining on rope baskets and embroidered
Embroidery

File:Kazakh rug chain stitch embroidery.jpgEmbroidery is the art or handicraft of decorating Textile or other materials with sewing needle and yarn....
 fabric
Textile

A textile is a flexible material consisting of a network of natural or artificial fibres often referred to as thread or yarn. Yarn is produced by Spinning raw wool fibres, linen, cotton, or other material on a spinning wheel to produce long strands known as yarn....
s, and to hold utensils
List of eating utensils

This is a list of eating and serving implements.* Chopsticks* Drinking straws* Fork* Knife* Knork* Splayd* Spoon* Spork* Tongs...
 together; also in crisscross decorations on human
Human

A human being, also human or man, is a member of a species of bipedalism primates in the family Hominidae . Mitochondrial DNA evidence indicates that modern humans originated in east Africa about 200,000 years ago....
 skull
Skull

The skull is a bone structure found in the head of many animals. The skull supports the structures of the face and protects the head against injury....
s. Collagen normally converts to gelatin, but survived due to the dry conditions. Animal glues are thermoplastic
Thermoplastic

A thermoplastic is a polymer that turns to a liquid when heated and freezes to a very glassy state when cooled sufficiently. Most thermoplastics are high-molecular mass polymers whose Chain s associate through weak Van der Waals forces ; stronger dipole interactions and hydrogen bonding ; or even stacking of aromatic rings ....
, softening again upon reheating, and so they are still used in making musical instrument
Musical instrument

A musical instrument is an object constructed or used for the purpose of making music. In principle, anything that produces sound can serve as a musical instrument....
s such as fine violin
Violin

The violin is a Bow string instrument with four strings usually tuned in perfect fifths. It is the smallest and highest-pitched member of the violin family of string instruments, which also includes the viola and cello....
s and guitar
Guitar

The guitar is a musical instrument with ancient roots that is used in a wide variety of musical styles. It typically has six Strings , but Tenor guitar, Seven-string guitar, Eight-string guitar, Ten-string guitar, Eleven-string guitar, Twelve-string guitar, Thirteen-string guitar and doubleneck guitar string guitars also exist....
s, which may have to be reopened for repairs—an application incompatible with tough, synthetic
Chemical synthesis

In chemistry, chemical synthesis is purposeful execution of chemical reactions in order to get a product , or several products. This happens by physics and chemical manipulations usually involving one or more reactions....
 plastic
Plastic

Plastic is the general common term for a wide range of synthetic or semisynthetic organic chemistry solid materials suitable for the manufacture of industrial products....
 adhesives, which are permanent. Animal sinews and skins, including leather
Leather

Leather is a material created through the tanning of rawhides and skins of animals, primarily cattlehide. The tanning process converts the putrescible skin into a durable, long-lasting and versatile natural material for various uses....
, have been used to make useful articles for millennia.

Gelatin-resorcinol
Resorcinol

Resorcinol is a chemical compound from the dihydroxy phenols. It is the 1,3-isomer of benzenediol, and is also known with a variety of other names, including: m-dihydroxybenzene, 1,3-benzenediol, 1,3-dihydroxybenzene, 3-hydroxyphenol, m-hydroquinone, m-benzenediol, and 3-hydroxycyclohexadien-1-one....
-formaldehyde
Formaldehyde

Formaldehyde is a chemical compound with the chemical formula H2CO. It is the simplest aldehyde. Formaldehyde exists in several forms aside from H2CO: the cyclic trimer trioxane and the polymer Polyoxymethylene....
 glue (and with formaldehyde replaced by less-toxic pentanedial and ethanedial
Glyoxal

Glyoxal is an organic compound with the formula OCHCHO. This yellow colored liquid is the smallest dialdehyde ....
) has been used to repair experimental incisions in rabbit
Rabbit

Rabbits are small mammals in the family Leporidae of the order Lagomorpha, found in several parts of the world. There are seven different genus in the family taxonomy as rabbits, including the European rabbit , Cottontail rabbit , and the Amami rabbit ....
 lung
Lung

The lung is the essential respiration organ in air-breathing animals, including most tetrapods, a few fish and a few snails. In mammals and the more complex life forms, the two lungs are located in the chest on either side of the heart....
s.

Medical uses

Collagen has been widely used in cosmetic surgery, as a healing aid for burn patients for reconstruction of bone and a wide variety of dental, orthopedic and surgical purposes. Some points of interest are:
  1. when used cosmetically, there is a chance of allergic reactions causing prolonged redness; however, this can be virtually eliminated by simple and inconspicuous patch testing prior to cosmetic use, and
  2. most medical collagen is derived from young beef cattle (bovine) from certified BSE (Bovine spongiform encephalopathy
    Bovine spongiform encephalopathy

    Bovine Spongiform Encephalopathy , commonly known as Mad-Cow Disease , is a fatal, neurodegenerative disease in cattle, that causes a spongy degeneration in the brain and spinal cord....
    ) free animals. Most manufacturers use donor animals from either "closed herds", or from countries which have never had a reported case of BSE such as Australia, Brazil and New Zealand.
  3. porcine (pig) tissue is also widely used for producing collagen sheet for a variety of surgical purposes.
  4. alternatives using the patient's own fat
    Fat

    Fats consist of a wide group of compounds that are generally soluble in organic solvents and largely insoluble in water. Chemistry, fats are generally ester of glycerol and fatty acids....
    , hyaluronic acid or polyacrylamide gel are readily available.


Collagens are widely employed in the construction of artificial skin
Artificial skin

Artificial skin refers to skin grown in a laboratory that can be used as skin replacement for people who have suffered severe burns or skin diseases....
 substitutes used in the management of severe burns
Burn (injury)

A burn is a type of injury that may be caused by heat, Temperature, electricity, chemicals, light, radiation, or friction. Burns can be highly variable in terms of the tissue affected, the severity, and resultant complications....
. These collagens may be derived from bovine, equine or porcine, and even human, sources and are sometimes used in combination with silicone
Silicone

Silicones are largely inert, man-made compounds with a wide variety of forms and uses. Typically heat-resistant, nonstick, and rubberlike, they are commonly used in cookware, medicine, sealants, adhesives, lubricants, and insulation....
s, glycosaminoglycans, fibroblasts, growth factors and other substances.

Collagen is also sold commercially as a joint mobility supplement. This lacks supportive research as the proteins would just be broken down into its base amino acids during digestion, and could go to a variety of places besides the joints depending upon need and DNA orders.

Recently an alternative to animal-derived collagen has become available. Although expensive, this human collagen, derived from donor cadavers, placenta
Placenta

The placenta or afterbirth is a highly vascularized ephemeral organ present in Placentalia vertebrates that connects the developing fetal tissues to the uterine wall....
s and aborted fetuses, may minimize the possibility of immune reactions.

Although it cannot be absorbed through the skin, collagen is now being used as a main ingredient for some cosmetic makeup.

Conformation and structure

Collagen structure is complex. Its conformation can be considered at the monomeric level (individual) collagen molecules and/or at its aggregate level, how the monomers are arranged i.e. their packing structure (fibrils, networks, etc. - see table below).

History and Background

The molecular and packing structures of collagen have eluded scientists for decades; the first evidence that it possess a regular structure at the molecular level was presented in the mid-1930s . Since that time many prominent scholars, including (but not limited to) Nobel laureate Crick, and Pauling, Rich, Yonath, Brodsky, Berman and Ramachandran concentrated on the conformation of the collagen monomoer. Several competing models although correctly dealing with the conformation of each individual peptide chain, gave way to the triple-helical "Madras" model which provided an essentially correct model of the molecule's quaternary structure although this model still required some refinement . The packing structure of collagen has not been defined to the same degree outside of the fibrillar collagen types, although it has been long known to be hexagonal or quasi-hexagonal .As with its monomeric structure, several conflicting models alleged that either the packing arrangement of collagen molecules is ‘sheet-like’ or microfibrillar . Recently it was confirmed that the microfibrillar structure as described by Fraser, Miller, Wess (amongst others) was closest to the observed structure, although it over-simplified the topological progression of neighboring collagen molecules and hence did not predict the correct conformation of the discontinuous D-periodic pentameric arrangement termed simply: the microfibril .

Molecular Structure

The tropocollagen or "collagen molecule" is a subunit of larger collagen aggregates such as fibrils. It is approximately 300 nm long and 1.5 nm in diameter, made up of three polypeptide strands (called alpha peptides), each possessing the conformation of a left-handed helix
Helix

A helix is a special kind of space curve, i.e. a Differentiable manifold curve in three-space. As a mental image of a helix one may take the spring ....
 (its name is not to be confused with the commonly occurring alpha helix, a right-handed structure). These three left-handed helices are twisted together into a right-handed coiled coil
Coiled coil

A coiled coil is a structural motif in proteins, in which 2-7 alpha helix are coiled together like the strands of a rope . Many coiled coil type proteins are involved in important biological functions such as the regulation of gene expression e.g....
, a triple helix or "super helix", a cooperative quaternary structure
Quaternary structure

In biochemistry, quaternary structure is the arrangement of multiple protein folding protein molecules in a multi-subunit complex....
 stabilized by numerous hydrogen bond
Hydrogen bond

A hydrogen bond is the attractive force between one electronegative atom and a hydrogen covalently bonded to another electronegative atom. It results from a dipole-dipole force with a hydrogen atom bonded to nitrogen, oxygen or fluorine ....
s. With type I collagen and possibly all fibrillar collagens if not all collagens, each triple-helix associates into a right-handed super-super-coil that is referred to as the collagen microfibril. Each microfibril is interdigitated with its neighboring microfibrils to a degree that might suggest that they are individually unstable although within collagen fibrils they are so well ordered as to be crystalline.

A distinctive feature of collagen is the regular arrangement of amino acid
Amino acid

In chemistry, an amino acid is a molecule containing both amine and carboxyl functional groups. These molecules are particularly important in biochemistry, where this term refers to alpha-amino acids with the general formula H2NCHRCOOH, where R is an organic substituent....
s in each of the three chains of these collagen subunits. The sequence often follows the pattern Gly
Glycine

Glycine is the organic compound with the chemical formula NH2CH2COOH. It is the smallest of the 20 amino acids commonly found in proteins, coded by codons GGU, GGC, GGA and GGG....
-Pro
Proline

Proline is an a-amino acid, one of the twenty DNA-encoded amino acids. Its codons are CCU, CCC, CCA, and CCG. It is not an essential amino acid, which means that humans can synthesize it....
-Y or Gly-X-Hyp
Hydroxyproline

4-Hydroxyproline, or hydroxyproline , is an uncommon amino acid, abbreviated as HYP, e.g., in Protein Data Bank....
, where X and Y may be any of various other amino acid residues. Proline or hydroxyproline constitute about 1/6 of the total sequence. With Glycine accounting for the 1/3 of the sequence, this means that approximately half of the collagen sequence is not glycine, proline or hydroxyproline, a fact often missed due to the distraction of the unusual GXY character of collagen alpha-peptides. This kind of regular repetition and high glycine content is found in only a few other fibrous proteins, such as silk
Silk

Silk is a natural protein fiber, some forms of which can be weaving into textiles. The best-known type of silk is obtained from Pupa#Cocoons made by the larvae of the mulberry silkworm Bombyx mori reared in captivity ....
 fibroin
Fibroin

Fibroin is a type of protein created by Bombyx mori in the production of silk. Silk emitted by the silkworm consists of two main proteins, sericin and fibroin, fibroin being the structural center of the silk, and serecin being the sticky material surrounding it....
. 75-80% of silk is (approximately) -Gly-Ala-Gly-Ala- with 10% serine
Serine

Serine is an organic compound with the chemical formula hydrogenoxygen2carbonCHCH2OH....
—and elastin
Elastin

Elastin is a protein in connective tissue that is Elasticity and allows many tissues in the body to resume their shape after stretching or contracting....
 is rich in glycine, proline, and alanine (Ala), whose side group
Side chain

A side chain in organic chemistry and biochemistry is a part of a molecule that is attached to a core structure. The placeholder R is often used as a generic placeholder for side chains, the R historically being derived from radical or rest....
 is a small, inert methyl group. Such high glycine and regular repetitions are never found in globular proteins save for very short sections of their sequence. Chemically-reactive
Chemical reaction

A chemical reaction is a process that always results in the interconversion of chemical substances. The substance or substances initially involved in a chemical reaction are called reactants....
 side groups are not needed in structural proteins as they are in enzymes and transport protein
Transport protein

A membrane transport protein is a protein involved in the movement of ions, small molecules, or macromolecules, such as another protein across a biological membrane....
s, however collagen is not quite just a structural protein. Due to its key role in the determination of cell phenotype, cell adhesion, tissue regulation and infrastructure, many sections of its non-proline rich regions have cell or matrix association / regulation roles. The relatively high content of Proline and Hydroxyproline rings, with their geometrically constrained carboxyl and (secondary) amino groups, along with the rich abundance of glycine, accounts for the tendency of the individual polypeptide strands to form left-handed helices spontaneously, without any intrachain hydrogen bonding.

Because glycine is the smallest amino acid with no side-chain, it plays a unique role in fibrous structural proteins. In collagen, Gly is required at every third position because the assembly of the triple helix puts this residue at the interior (axis) of the helix, where there is no space for a larger side group than glycine’s single hydrogen
Hydrogen

Hydrogen is the chemical element with atomic number 1. It is represented by the chemical symbol H. At standard temperature and pressure, hydrogen is a colorless, odorless, nonmetallic, tasteless, highly combustion and explosive Diatomic molecule gas with the molecular formula H2....
 atom
Atom

|-! bgcolor=gray | Properties|-||}The atom is a basic unit of matter consisting of a dense, central atomic nucleus surrounded by a electron cloud of electric charge electrons....
. For the same reason, the rings of the Pro and Hyp must point outward. These two amino acids help stabilize the triple helix—Hyp even more so than Pro—a lower concentration of them is required in animals such as fish
Fish

A fish is any marine biology vertebrate animal that is typically ectothermic , covered with scale , and equipped with two sets of paired fins and several unpaired fins....
, whose body temperatures
Thermoregulation

Thermoregulation is the ability of an organism to keep its core temperature within certain boundaries, even when the surrounding temperature is very different....
 are lower than most warm-blooded animals.

Fibrillar Structure


The tropocollagen subunits
Protein subunit

In structural biology, a protein subunit or subunit protein is a single protein molecule that assembles with other protein molecules to form a protein complex: a multimeric or oligomeric protein....
 spontaneously self-assemble
Molecular self-assembly

Molecular self-assembly is the process by which molecules adopt a defined arrangement without guidance or management from an outside source. There are two types of self-assembly, intramolecular self-assembly and intermolecular self-assembly....
, with regularly staggered ends, into even larger arrays in the extracellular
Extracellular

In cell biology, molecular biology and related fields, the word extracellular means "outside the cell ". This space is usually taken to be outside the plasma membranes, and occupied by fluid....
 spaces of tissues. In the fibrillar collagens, the molecules are staggered from each other by about 67nm (a unit that is referred to as ‘D’ and changes depending upon the hydration state of the aggregate). Each D-period contains 4 and a fraction collagen molecules. This is because 300 nm divided by 67 nm does not give an integer (the length of the collagen molecule divided by the stagger distance D). Therefore in each D-period repeat of the microfibril, there is a part containing 5 molecules in cross-section – called the “overlap” and a part containing only 4 molecules. The triple-helices are also arranged in a hexagonal or quasi-hexagonal array in cross-section, in both the gap and overlap regions.

There is some covalent
Covalent bond

A covalent bond is a form of chemical bonding that is characterized by the sharing of pairs of electrons between atoms, or between atoms and other covalent bonds....
 crosslinking within the triple helices, and a variable amount of covalent crosslinking between tropocollagen helices forming well organized aggregates (such as fibrils). Larger fibrillar bundles are formed with the aid of several different classes of proteins (including different collagen types), glycoproteins and proteoglycans to form the different types of mature tissues from alternate combinations of the same key players. Collagen's insolubility was a barrier to the study of monomeric collagen until it was found that tropocollagen from young animals can be extracted because it is not yet fully crosslinked
Cross-link

Cross-links are bonds that link one polymer chain to another. They can be covalent bonds or ionic bonds. "Polymer chains" can refer to synthetic polymers or natural polymers ....
. However, advances in microscopy techniques (Electron Microscopy - EM and Atomic Force Microscopy -AFM) and X-ray diffraction have enabled researchers to obtain increasingly detailed images of collagen structure in situ. These later advances are particularly important to better understanding the way in which collagen structure affects cell-cell and cell-matrix communication and how tissues are constructed in growth and repair, and changed in development and disease.

Collagen fibrils are semi-crystalline aggregates of collagen molecules. Collagen fibers are bundles of fibrils.

Collagen fibrils / aggregates are arranged in different combinations and concentrations in various tissues to provide varying tissue properties. In bone, entire collagen triple helices lie in a parallel, staggered array. 40 nm gaps between the ends of the tropocollagen subunits (approximately equal to the gap region) probably serve as nucleation sites for the deposition of long, hard, fine crystals of the mineral component, which is (approximately) hydroxyapatite
Hydroxylapatite

Hydroxylapatite, also called hydroxyapatite, is a mineral. It is a naturally occurring form of calcium apatite with the formula Ca53, but is usually written Ca1062 to denote that the crystal unit cell comprises two entities....
, Ca10(PO4)6 (OH)2with some phosphate
Phosphate

A phosphate, an inorganic chemical, is a Salt of phosphoric acid. Inorganic phosphates are mining to obtain phosphorus for use in agriculture and industry....
. It is in this way that certain kinds of cartilage turn into bone. Type I collagen gives bone its tensile strength.

Types and associated disorders

Collagen occurs in many places throughout the body. There are more than 28 types of collagen described in literature. Over 90% of the collagen in the body, however, are of type I, II, III, and IV.

  • Collagen One - skin, tendon, vascular, ligature, organs, bone (main component of bone)
  • Collagen Two - cartilage (main component of cartilage)
  • Collagen Three - reticulate (main component of reticular fibers), commonly found alongside type I.
  • Collagen Four - forms bases of cell basement membrane


Collagen diseases commonly arise from genetic defects that affect the biosynthesis, assembly, postranslational modification, secretion, or other processes in the normal production of collagen.

Type Notes Gene(s) Disorders
Collagen disease

Collagen disease is a term previously used to describe systemic autoimmune diseases , but now is thought to be more appropriate for diseases associated with defects in collagen, which is a component of the connective tissue....
|- | I
Type-I collagen

Type-I collagen is the most abundant collagen of the human body.It is present in scar tissue, the end product when tissue healing by repair....
 
This is the most abundant collagen of the human body. It is present in scar tissue
Scar

Scars are areas of fibrous biological tissue that replace normal skin after injury. A scar results from the biologic process of wound repair in the skin and other biological tissue of the body....
, the end product when tissue heals
Healing

Healing, assessed physically, is the process by which the Cell in the body regenerate and repair to reduce the size of a damaged or necrosis area.Healing incorporates both the removal of necrotic Biological tissue , and the replacement of this tissue....
 by repair. It is found in tendon
Tendon

A tendon is a tough band of fibrous connective tissue that usually connects muscle to bone and is capable of withstanding tension . Tendons are similar to ligaments except that ligaments join one bone to another....
s, skin, artery walls, the endomysium
Endomysium

The endomysium, literally meaning within the muscle, is a layer of connective tissue that ensheaths a muscle fiber and is composed mostly from reticular fibers....
 of myofibrils, fibrocartilage, and the organic part of bones and teeth.
COL1A1
COL1A1

Collagen, type I, alpha 1, also known as COL1A1, is a human gene that encodes the major component of type I collagen, the fibrillar collagen found in most connective tissues, and the only component of the collagen found in cartilage....
, COL1A2
COL1A2

Collagen, type I, alpha 2, also known as COL1A2, is a human gene....
 
osteogenesis imperfecta
Osteogenesis imperfecta

Osteogenesis imperfecta is a genetic bone disorder. People with OI are born without the proper protein , or the ability to make it, usually because of a deficiency of Type-I collagen....
, Ehlers-Danlos Syndrome
Ehlers-Danlos syndrome

Ehlers-Danlos syndrome is a group of rare genetic disorders affecting humans caused by a defect in collagen synthesis. Depending on the individual mutation, the severity of the syndrome can vary from mild to life-threatening....
, Infantile cortical hyperostosis
Infantile cortical hyperostosis

Infantile cortical hyperostosis is a self-limited Inflammation disorder of infants that causes bone changes, soft tissue swelling and irritability....
 aka Caffey's disease |- | II
Type-II collagen

Type-II collagen is the basis for articular cartilage and hyaline cartilage.It makes up 50% of all protein in cartilage and 85-90% of collagen of articular cartilage....
 
Hyaline cartilage
Hyaline cartilage

Hyaline cartilage consists of a slimy mass of a firm consistency, but of considerable elasticity and pearly bluish color. It contains no nerves or blood vessels, and its structure is relatively simple....
, makes up 50% of all cartilage protein. Vitreous humour
Vitreous humour

The vitreous humour or vitreous humor is the clear gel that fills the space between the Lens and the retina of the eyeball of humans and other vertebrate....
 of the eye.
COL2A1
COL2A1

Collagen, type II, alpha 1 , also known as COL2A1, is a human gene that provides instructions for the production of the pro-alpha1 chain of type II collagen....
 
Collagenopathy, types II and XI
Collagenopathy, types II and XI

The type II and XI collagenopathies are a group of disorders that affect connective tissue, the tissue that supports the body's joints and organs....
|- | III
Type-III collagen

Collagen, type III, alpha 1 , also known as COL3A1, is a human gene.Type-III collagen is a fibrous scleroprotein in bone, cartilage, tendon, bone marrow stroma and other connective tissue; yields gelatin on boiling....
 
This is the collagen of granulation tissue
Granulation tissue

Granulation tissue is the perfusion, fibrous connective tissue that replaces a fibrin clot in wound healing. Granulation tissue typically grows from the base of a wound and is able to fill wounds of almost any size it heals....
, and is produced quickly by young fibroblasts before the tougher type I collagen is synthesized. Reticular fiber
Reticular fiber

Reticular fibers or reticulin is a histology term used to describe a type of fiber in connective tissue composed of type III collagen. Reticular fibers crosslink to form a fine meshwork ....
. Also found in artery walls, skin, intestines and the uterus
COL3A1 Ehlers-Danlos Syndrome
Ehlers-Danlos syndrome

Ehlers-Danlos syndrome is a group of rare genetic disorders affecting humans caused by a defect in collagen synthesis. Depending on the individual mutation, the severity of the syndrome can vary from mild to life-threatening....
|- | IV
Type-IV collagen

Type-IV collagen is a type of collagen found primarily in the basal lamina. The C-terminus domain is not removed in post-translational processing, and the fibers link head-to-head, rather than in parallel....
 
basal lamina
Basal lamina

The basal lamina is a layer of extracellular matrix on which epithelium sits and which is secreted by the epithelial cells. It is often confused with the basement membrane, and sometimes used inconsistently in the literature, see below....
; eye lens. Also serves as part of the filtration system in capillaries and the glomeruli of nephron
Nephron

Nephron is the basic structural and functional unit of the kidney. Its chief function is to regulate the concentration of water and soluble substances like sodium salts by filtering the blood, reabsorbing what is needed and excreting the rest as urine....
 in the kidney
Kidney

The kidneys are Organ that have numerous biological roles. Their primary role is to maintain the homeostasis balance of bodily fluids by filtering and secreting Metabolomics#Metabolitess and minerals from the blood and excreting them, along with water , as urine....
.
COL4A1
COL4A1

Collagen, type IV, alpha 1, also known as COL4A1, is a human gene.Mutations in COL4A1 exons 24 and 25 are associated with HANAC ....
, COL4A2
COL4A2

Collagen, type IV, alpha 2, also known as COL4A2, is a human gene.ReferencesFurther reading...
, COL4A3
COL4A3

Collagen, type IV, alpha 3 , also known as COL4A3, is a human gene.ReferencesFurther reading...
, COL4A4
COL4A4

Collagen, type IV, alpha 4, also known as COL4A4, is a human gene.ReferencesFurther reading...
, COL4A5
COL4A5

Collagen, type IV, alpha 5 , also known as COL4A5, is a human gene....
, COL4A6
COL4A6

Collagen, type IV, alpha 6, also known as COL4A6, is a human gene.ReferencesFurther reading...
 
Alport syndrome
Alport syndrome

Alport syndrome is a genetic disorder characterized by glomerulonephritis, endstage kidney disease, and hearing loss. Alport syndrome can also affect the eyes....
|- | V
most interstitial tissue, assoc. with type I, associated with placenta
Placenta

The placenta or afterbirth is a highly vascularized ephemeral organ present in Placentalia vertebrates that connects the developing fetal tissues to the uterine wall....
 
COL5A1
COL5A1

Collagen, type V, alpha 1, also known as COL5A1, is a human gene.See also* Type-V collagenReferencesFurther reading...
, COL5A2
COL5A2

Collagen, type V, alpha 2, also known as COL5A2, is a human gene.See also* Type-V collagenReferencesFurther reading...
, COL5A3
COL5A3

Collagen, type V, alpha 3, also known as COL5A3, is a human gene.ReferencesFurther reading...
 
Ehlers-Danlos syndrome
Ehlers-Danlos syndrome

Ehlers-Danlos syndrome is a group of rare genetic disorders affecting humans caused by a defect in collagen synthesis. Depending on the individual mutation, the severity of the syndrome can vary from mild to life-threatening....
 (Classical) |- | VI
most interstitial tissue, assoc. with type I COL6A1
COL6A1

Collagen, type VI, alpha 1, also known as COL6A1, is a human gene.ReferencesFurther reading...
, COL6A2
COL6A2

Collagen, type VI, alpha 2, also known as COL6A2, is a human gene.ReferencesFurther reading...
, COL6A3
COL6A3

Collagen, type VI, alpha 3, also known as COL6A3, is a human gene.ReferencesFurther reading...
 
Ulrich myopathy and Bethlem myopathy
Bethlem myopathy

Bethlem myopathy is an autosomal dominant myopathy, classified as a congenital form of muscular dystrophy, that is caused by a variation in one of the three genes coding for type VI collagen....
|- | VII
forms anchoring fibrils
Anchoring fibrils

Anchoring fibrils extend from the basal lamina of epithelial cells and attach to the lamina reticularis by wrapping around the reticular fiber bundles....
 in dermal epidermal junctions
COL7A1
COL7A1

Collagen, type VII, alpha 1 , also known as COL7A1, is a human gene.Type VII collagen is also found in the Retina; its function in this organ is unknown....
 
epidermolysis bullosa dystrophica
Epidermolysis bullosa dystrophica

Epidermolysis bullosa dystrophica or Dystrophic EB is an inherited disease affecting the skin and other organs....
|- | VIII
some endothelial cells COL8A1
COL8A1

Collagen, type VIII, alpha 1, also known as COL8A1, is a human gene.ReferencesFurther reading...
, COL8A2
COL8A2

Collagen, type VIII, alpha 2, also known as COL8A2, is a human gene.ReferencesFurther reading...
 
- | IX FACIT collagen
FACIT collagen

FACIT collagen refers to a type of collagen which is also a proteoglycan.FACIT collagens include collagen types IX, XII, XIV, XIX, and XXI....
, cartilage, assoc. with type II and XI fibrils
COL9A1
COL9A1

Collagen, type IX, alpha 1, also known as COL9A1, is a human gene.ReferencesFurther reading...
, COL9A2
COL9A2

Collagen, type IX, alpha 2, also known as COL9A2, is a human gene.ReferencesFurther reading...
, COL9A3
COL9A3

Collagen, type IX, alpha 3, also known as COL9A3, is a human gene.ReferencesFurther reading...
 
- EDM2 and EDM3 |- | X hypertrophic
Hypertrophic

Hypertrophic may refer to:* Excessive accumulation* A classification of excessive amounts of nutrients in a body of water* The medical terminology where an increased size of an organ is observed, See Organ hypertrophy....
 and mineralizing cartilage
COL10A1
COL10A1

Collagen, type X, alpha 1, also known as COL10A1, is a human gene.Discoidin domain receptor tyrosine kinase 2 is a collagen receptor for it....
 
Schmid metaphyseal dysplasia |- | XI cartilage COL11A1
COL11A1

Collagen, type XI, alpha 1, also known as COL11A1, is a human gene.ReferencesFurther reading...
, COL11A2
COL11A2

COL11A2 is a human gene that is one of several genes that provide instructions for the production of type XI collagen. The COL11A2 gene produces one component of this type of collagen, called the pro-alpha2 chain....
 
Collagenopathy, types II and XI
Collagenopathy, types II and XI

The type II and XI collagenopathies are a group of disorders that affect connective tissue, the tissue that supports the body's joints and organs....
|- | XII
FACIT collagen
FACIT collagen

FACIT collagen refers to a type of collagen which is also a proteoglycan.FACIT collagens include collagen types IX, XII, XIV, XIX, and XXI....
, interacts with type I containing fibrils, decorin
Decorin

Decorin is a proteoglycan on average 90 - 140 Dalton in size.It belongs to the small leucine-rich proteoglycan family and consists of a protein core containing leucine repeats with a glycosaminoglycan chain consisting of either chondroitin sulfate or dermatan sulfate ....
 and glycosaminoglycans
COL12A1
COL12A1

Collagen, type XII, alpha 1, also known as COL12A1, is a human gene.ReferencesFurther reading...
 
- | XIII transmembrane collagen, interacts with integrin a1b1, fibronectin
Fibronectin

Fibronectin is a high-molecular weight extracellular matrix glycoprotein that binds to cell membrane-spanning receptor proteins called integrins....
 and components of basement membranes like nidogen and perlecan
Perlecan

Heparan sulfate proteoglycan 2 , is a human gene which encodes the perlecan protein.Perlecan is a large multidomain proteoglycan that binds to and cross-links many extracellular matrix components and cell-surface molecules....
.
COL13A1
COL13A1

Collagen, type XIII, alpha 1, also known as COL13A1, is a human gene.ReferencesFurther reading...
 
- | XIV FACIT collagen
FACIT collagen

FACIT collagen refers to a type of collagen which is also a proteoglycan.FACIT collagens include collagen types IX, XII, XIV, XIX, and XXI....
 
COL14A1
COL14A1

Collagen, type XIV, alpha 1 , also known as COL14A1, is a human gene.ReferencesFurther reading...
 
- | XV - COL15A1
COL15A1

Collagen, type XV, alpha 1, also known as COL15A1, is a human gene.ReferencesFurther reading...
 
- | XVI - COL16A1
COL16A1

Collagen, type XVI, alpha 1, also known as COL16A1, is a human gene.ReferencesFurther reading...
 
- | XVII
Collagen XVII

Collagen XVII, previously called BP180, is a transmembrane protein which plays a critical role in maintaining the linkage between the intracellular and the extracellular structural elements involved in epidermal adhesion ....
 
transmembrane collagen, also known as BP180, a 180 kDa protein COL17A1 Bullous Pemphigoid
Bullous pemphigoid

Bullous pemphigoid, also referred to as BP, is a chronic autoimmune disorder skin disease, involving the formation of blisters below the surface of the skin and antibodies against the Collagen XVII component of hemidesmosomes....
 and certain forms of junctional epidermolysis bullosa
Epidermolysis bullosa

Epidermolysis Bullosa is a rare disorder caused by a mutation in the keratin gene. The disorder is characterized by the presence of extremely fragile skin and recurrent blister formation, resulting from minor mechanical friction or trauma....
|- | XVIII
Type XVIII collagen

Type XVIII collagen is a type of collagen which can be cleaved to form endostatin.External links...
 
source of endostatin
Endostatin

Endostatin is a naturally-occurring 20-kDa C-terminal fragment derived from type XVIII collagen. It is reported to serve as an anti-angiogenic agent, similar to angiostatin and thrombospondin...
 
COL18A1
COL18A1

Collagen, type XVIII, alpha 1, also known as COL18A1, is a human gene.See alsoCollagenReferencesFurther reading...
 
- | XIX FACIT collagen
FACIT collagen

FACIT collagen refers to a type of collagen which is also a proteoglycan.FACIT collagens include collagen types IX, XII, XIV, XIX, and XXI....
 
COL19A1
COL19A1

Collagen, type XIX, alpha 1, also known as COL19A1, is a human gene.ReferencesFurther reading...
 
- | XX - COL20A1
COL20A1

COL20A1 is a collagen gene....
 
- | XXI FACIT collagen
FACIT collagen

FACIT collagen refers to a type of collagen which is also a proteoglycan.FACIT collagens include collagen types IX, XII, XIV, XIX, and XXI....
 
COL21A1
COL21A1

COL21A1 is a collagen gene....
 
- | XXII - COL22A1
COL22A1

COL22A1 is a collagen gene....
 
- | XXIII MACIT collagen - COL23A1
COL23A1

COL23A1 is a collagen gene....
 
- | XXIV - COL24A1
COL24A1

COL24A1 is a collagen gene....
 
- | XXV - COL25A1
COL25A1

Collagen, type XXV, alpha 1, also known as COL25A1, is a human gene.ReferencesFurther reading...
 
- | XXVI - EMID2
EMID2

EMI domain containing 2, also known as EMID2, is a human gene.ReferencesFurther reading...
 
- | XXVII - COL27A1
COL27A1

COL27A1 is a gene the codes for type XXVII collagen. It was discovered by Dr. James M. Pace and his colleagues at the University of Washington....
 
- | XXVIII - COL28A1
COL28A1

COL28A1 is a collagen gene....
 
- | XXIX epidermal collagen Atopic Dermatitis
Atopic dermatitis

Atopic dermatitis is an inflammation, chronically relapsing, non-contagious and pruritis skin disease. It has been given names like "prurigo Besnier," "neurodermitis," "endogenous eczema," "flexural eczema," "infantile eczema," and "prurigo diathsique"....


In addition to the above mentioned disorders, excessive deposition of collagen occurs in Scleroderma
Scleroderma

Systemic scleroderma is a systemic connective tissue disease.It is also known as "systemic Sclerosis "....
.

Staining

In histology
Histology

Histology is the study of the anatomy of cell and tissue of plants and animals. It is performed by examining a thin slice of tissue under a light microscope or electron microscope....
, collagen is brightly eosinophilic (pink) in standard H&E
H&E stain

'H&E stain', 'HE stain' or 'hematoxylin and eosin stain', is a popular staining method in histology. It is the most widely used stain in medical diagnosis; for example when a pathologist looks at a biopsy of a suspected cancer, the histological section is likely to be stained with H&E and termed H&E section, H+E section, or ...
 slides. The dye
Dye

A dye can generally be described as a colored substance that has an Chemical affinity to the Wiktionary:substrate to which it is being applied....
 methyl violet
Methyl violet

Methyl violet is the name given to a group of similar chemicals used as pH indicators and dyes. Methyl violets are mixtures of tetramethyl, pentamethyl and hexamethyl pararosanilins....
 may be used to stain
Staining (biology)

Staining is an auxiliary technique used in microscopy to enhance contrast in the microscopic image.In biochemistry it involves adding a class-specific dye to a substrate to qualify or quantify the presence of a specific compound....
 the collagen in tissue samples.

The dye methyl blue
Methyl blue

Methyl blue, also known as Cotton blue, Helvetia blue, Acid blue 93, or C.I. 42780, is a chemical compound with the molecular formula C37H27N3Na2O9S3....
 can also be used to stain collagen and immunohistochemical
Immunohistochemistry

Immunohistochemistry or IHC refers to the process of localizing proteins in cells of a tissue section exploiting the principle of antibody binding specifically to antigens in biological tissues....
 stains are available if required.

The best stain for use in differentiating collagen from other fibers is Masson's trichrome
Masson's trichrome

Masson's trichrome is a three-color staining protocol used in histology. The recipes evolved from the original Masson's formulation to different specific applications, but all are suited for distinguishing cell from surrounding connective tissue....
 stain.

Synthesis


Amino acids

Collagen has an unusual amino acid
Amino acid

In chemistry, an amino acid is a molecule containing both amine and carboxyl functional groups. These molecules are particularly important in biochemistry, where this term refers to alpha-amino acids with the general formula H2NCHRCOOH, where R is an organic substituent....
 composition and sequence:
  • Glycine
    Glycine

    Glycine is the organic compound with the chemical formula NH2CH2COOH. It is the smallest of the 20 amino acids commonly found in proteins, coded by codons GGU, GGC, GGA and GGG....
     (Gly) is found at almost every third residue
    Residue (chemistry)

    In chemistry, residue refers to the material remaining after a distillation or an evaporation, or to a portion of a larger molecule, such as a methyl group....
  • Proline
    Proline

    Proline is an a-amino acid, one of the twenty DNA-encoded amino acids. Its codons are CCU, CCC, CCA, and CCG. It is not an essential amino acid, which means that humans can synthesize it....
     (Pro) makes up about 9% of collagen
  • Collagen contains two uncommon derivative amino acids not directly inserted during translation
    Translation (genetics)

    Translation is the first stage of protein biosynthesis . Translation is the production of proteins by decoding mRNA produced in Transcription ....
    . These amino acids are found at specific locations relative to glycine and are modified post-translationally by different enzymes, both of which require vitamin C
    Vitamin C

    Vitamin C or ascorbic acid is an essential nutrient for humans, a large number of simian species, a small number of other mammalian species , a few species of birds, and some fish....
     as a cofactor
    Cofactor (biochemistry)

    A cofactor is a non-protein chemical compound that is bound to an enzyme and is required for catalysis. They can be considered "helper molecules/ions" that assist in biochemical transformations....
    .
    • Hydroxyproline
      Hydroxyproline

      4-Hydroxyproline, or hydroxyproline , is an uncommon amino acid, abbreviated as HYP, e.g., in Protein Data Bank....
       (Hyp), derived from proline.
    • Hydroxylysine
      Hydroxylysine

      5-Hydroxylysine is an amino acid with the molecular formula C6H14N2O3. It is a hydroxy derivative of lysine....
      , derived from lysine
      Lysine

      Lysine is an a-amino acid with the chemical formula HO2CCH4NH2. This amino acid is an essential amino acid, which means that humans cannot synthesize it....
      . Depending on the type of collagen, varying numbers of hydroxylysines have disaccharide
      Disaccharide

      A disaccharide is a sugar composed of two monosaccharides.'Disaccharide' is one of the four chemical groupings of carbohydrates ....
      s attached to them.


Cortisol
Cortisol

Cortisol is a corticosteroid hormone or glucocorticoid produced by the adrenal cortex, that is part of the adrenal gland . It is usually referred to as the "stress hormone" as it is involved in response to stress and anxiety, controlled by Corticotropin-releasing hormone....
 stimulates degradation of amino acid from skin collagen.

Collagen I formation

Most collagen forms in a similar manner, but the following process is typical for type I:

  1. Inside the cell
    1. Three peptide
      Peptide

      Peptides are short polymers formed from the linking, in a defined order, of a-amino acids. The link between one amino acid residue and the next is known as an amide chemical bond or a peptide bond....
       chains are formed (2 alpha-1 and 1 alpha-2 chain) in ribosomes along the Rough Endoplasmic Reticulum (RER). These peptide chains (known as preprocollagen) have registration peptides on each end; and a signal peptide
      Signal peptide

      A signal peptide is a short peptide chain that directs the post-translation transport of a protein.Signal peptides may also be called targeting signals, signal sequences, transit peptides, or localization signals....
       is also attached to each
    2. Peptide chains are sent into the lumen of the RER
    3. Signal Peptides are cleaved inside the RER and the chains are now known as procollagen
    4. Hydroxylation
      Hydroxylation

      Hydroxylation is any chemistry process that introduces one or more hydroxyl groups into a compound thereby oxidation it. In biochemistry, hydroxylation reactions are often facilitated by enzymes called hydroxylases....
       of lysine
      Lysine

      Lysine is an a-amino acid with the chemical formula HO2CCH4NH2. This amino acid is an essential amino acid, which means that humans cannot synthesize it....
       and proline
      Proline

      Proline is an a-amino acid, one of the twenty DNA-encoded amino acids. Its codons are CCU, CCC, CCA, and CCG. It is not an essential amino acid, which means that humans can synthesize it....
       amino acids occurs inside the lumen. This process is dependent on Ascorbic Acid
      Ascorbic acid

      Ascorbic acid is a sugar acid with antioxidant properties. Its appearance is white to light-yellow crystals or powder. It is water-soluble. The L-enantiomer of ascorbic acid is commonly known as vitamin C....
       (Vitamin C) as a cofactor
      Cofactor

      Cofactor may refer to any of the following:* Cofactor The signed minor of a matrix* Minor as an alternative name for the determinant of a smaller Matrix than that which it describes...
    5. Glycosylation
      Glycosylation

      Glycosylation is the enzymatic process that links saccharides to produce glycans, either free or attached to proteins and lipids. This enzymatic process produces one of four fundamental components of all cells and also provides a co-translational and post-translational modification mechanism that modulates the structure and function of membr...
       of specific hydroxylated amino acid occurs
    6. Triple helical structure is formed inside the RER
    7. Procollagen is shipped to the golgi apparatus
      Golgi apparatus

      The Golgi apparatus is an organelle found in most eukaryote Cell . It was identified in 1898 by the Italian physician Camillo Golgi and was named after him....
      , where it is packaged and secreted by exocytosis
      Exocytosis

      Exocytosis is the durable process by which a cell directs the contents of secretory Vesicle_ out of the cell membrane. These membrane-bound vesicles contain soluble proteins to be secreted to the extracellular environment, as well as membrane proteins and lipids that are sent to become components of the cell membrane....
  2. Outside the cell
    1. Registration peptides are cleaved and tropocollagen is formed by procollagen peptidase
      Procollagen peptidase

      Procollagen peptidase is an endopeptidase involved in the processing of collagen.External links...
      .
    2. Multiple tropocollagen molecules form collagen fibrils, and multiple collagen fibrils form into collagen fibers
    3. Collagen is attached to cell membranes via several types of protein, including fibronectin
      Fibronectin

      Fibronectin is a high-molecular weight extracellular matrix glycoprotein that binds to cell membrane-spanning receptor proteins called integrins....
       and integrin
      Integrin

      Integrins are cell surface receptors that interact with the extracellular matrix and mediate various cell signaling. They define cellular shape, mobility, and regulate the cell cycle....
      .


Synthetic pathogenesis

Vitamin C deficiency causes scurvy
Scurvy

Scurvy is a disease resulting from a deficiency of vitamin C, which is required for the synthesis of collagen in humans. The chemical name for vitamin C, ascorbic acid, is derived from the Latin name of scurvy, scorbutus....
, a serious and painful disease
Disease

A disease or medical condition is an abnormal condition of an organism that impairs bodily functions, associated with specific symptoms and Medical signs....
 in which defective collagen prevents the formation of strong connective tissue
Connective tissue

Connective tissue is a form of fibrous biological tissue.It is one of the four types of tissue in traditional classifications .Collagen is the main protein of connective tissue in animals and the most abundant protein in mammals, making up about 25% of the total protein content....
. Gums
Gingiva

The gingiva , or gums, consists of the mucosal tissue that lies over the alveolar bone....
 deteriorate and bleed, with loss of teeth; skin discolors, and wound
Wound

In medicine, a wound is a type of injury in which the skin is torn, cut or punctured , or where blunt force physical trauma causes a bruise . In pathology, it specifically refers to a sharp injury which damages the dermis of the skin....
s do not heal. Prior to the eighteenth century, this condition was notorious among long duration military, particularly naval, expeditions during which participants were deprived of foods containing Vitamin C. In the human body, a malfunction of the immune system
Immune system

An immune system is a collection of biological processes within an organism that protects against disease by identifying and killing pathogens and tumour cells....
, called an autoimmune disease
Autoimmune disease

Autoimmune diseases arise from an overactive immune response of the body against substances and tissues normally present in the body. In other words, the body attacks its own cells....
, results in an immune response in which healthy collagen fibers are systematically destroyed with inflammation of surrounding tissues. The resulting disease processes are called Lupus erythematosus
Lupus erythematosus

Lupus erythematosus is a connective tissue disease....
, and rheumatoid arthritis
Rheumatoid arthritis

Rheumatoid arthritis is a chronic, systemic disease inflammation that may affect many tissues and organs, but principally attacks the joints producing a inflammatory synovitis that often progresses to destruction of the articular cartilage and ankylosis of the joints....
, or collagen tissue disorders.

Many bacteria and viruses have virulence factors which destroy collagen or interfere with its production.

Fossil record

Because the synthesis of collagen requires a high level of atmospheric oxygen, complex animals may not have been able to evolve until the atmosphere was oxygenic enough for collagen synthesis. The origin of collagen may have allowed cuticle, shell and muscle formation. However, the preservation of collagen in the fossil record is very scarce.

Art


Julian Voss-Andreae
Julian Voss-Andreae

Julian Voss-Andreae is a German sculptor living and working in the U.S.Voss-Andreae started out as a painter and later studied experimental physics at Free University of Berlin, University of Edinburgh and University of Vienna....
 has created sculptures based on the collagen structure out of bamboo and stainless steel. His piece "Unravelling Collagen" is, according to the artist, a "metaphor for aging and growth".

See also

  • Animal glue
    Animal glue

    An animal glue is an adhesive that is created by prolonged boiling of animal connective tissue.These protein colloid glues are formed through hydrolysis of the collagen from skins, bones, tendons, and other tissues, similar to gelatin....
  • Collagenase, the enzyme involved in collagen breakdown and remodelling. For more on other proteases that target collagen see The Proteolysis Map
    The Proteolysis Map

    The Proteolysis MAP is an integrated web resource focused on proteases....
  • Ehlers-Danlos Syndrome
    Ehlers-Danlos syndrome

    Ehlers-Danlos syndrome is a group of rare genetic disorders affecting humans caused by a defect in collagen synthesis. Depending on the individual mutation, the severity of the syndrome can vary from mild to life-threatening....
  • Fibrous protein
    Fibrous protein

    Scleroproteins are one of the two main classes of protein tertiary structure .They are also called fibrous proteins....
  • Gelatine
  • Hypermobility Syndrome
  • Marfan Syndrome
    Marfan syndrome

    Marfan syndrome is a genetic disorder of the connective tissue.It is sometimes inherited as a Autosomal dominant trait. It is carried by a gene called FBN1, which encodes a connective protein called fibrillin-1....
  • Osteoid
    Osteoid

    Osteoid is the organic portion of the matrix of Osseous tissue. Osteoblasts begin the process of forming bone tissue by secreting the osteoid as several specific protein....


Additional images


External links