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Innate immune system

 

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Innate immune system



 
 
The innate immune system comprises the cells and mechanisms that defend the host from infection by other organisms, in a non-specific manner. This means that the cells of the innate system recognize and respond to pathogens in a generic way, but unlike the adaptive immune system
Adaptive immune system

The adaptive immune system is composed of highly specialized, systemic cells and processes that eliminate or prevent pathogenic challenges. Thought to have arisen in the first Gnathostomata, the adaptive or "specific" immune system is activated by the ?non-specific? and evolutionarily older innate immune system ....
, it does not confer long-lasting or protective immunity to the host. Innate immune systems provide immediate defense against infection, and are found in all classes of plant
Plant

Plants are Life organisms belonging to the Kingdom Plantae. They include familiar organisms such as trees, herbs, bushes, grasses, vines, ferns, mosses, and green algae....
 and animal
Animal

Animals are a major group of multicellular, eukaryotic organisms of the Kingdom Animalia or Metazoa. Their body plan eventually becomes fixed as they develop, although some undergo a process of metamorphosis later on in their life....
 life.

innate system is thought to constitute an evolutionarily older defense strategy, and is the dominant immune system found in plant
Plant

Plants are Life organisms belonging to the Kingdom Plantae. They include familiar organisms such as trees, herbs, bushes, grasses, vines, ferns, mosses, and green algae....
s, fungi, insect
Insect

Insects are the biggest class of arthropods and the only ones with wings. They are the most diverse group of animals on the planet. They are most diverse at the equator and their diversity declines toward the poles....
s, and in primitive multicellular organisms (see Other forms of innate immunity).

The major functions of the vertebrate
Vertebrate

Vertebrates are members of the subphylum Vertebrata, chordates with Vertebras or Vertebral columns. The grouping sometimes includes the hagfish, which have no vertebrae, but are genetically quite closely related to lampreys, which do have vertebrae....
 innate immune system include:

lass="link1" onMouseover='showByLink("m8034950",this)' onMouseout='hide("m8034950")'href="http://www.absoluteastronomy.com/topics/Inflammation">Inflammation
Inflammation

Inflammation is the complex biological response of Blood vessel tissues to harmful stimuli, such as pathogens, damaged cells, or irritants. It is a protective attempt by the organism to remove the injurious stimuli as well as initiate the healing process for the tissue....
 is one of the first responses of the immune system to infection or irritation.






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The innate immune system comprises the cells and mechanisms that defend the host from infection by other organisms, in a non-specific manner. This means that the cells of the innate system recognize and respond to pathogens in a generic way, but unlike the adaptive immune system
Adaptive immune system

The adaptive immune system is composed of highly specialized, systemic cells and processes that eliminate or prevent pathogenic challenges. Thought to have arisen in the first Gnathostomata, the adaptive or "specific" immune system is activated by the ?non-specific? and evolutionarily older innate immune system ....
, it does not confer long-lasting or protective immunity to the host. Innate immune systems provide immediate defense against infection, and are found in all classes of plant
Plant

Plants are Life organisms belonging to the Kingdom Plantae. They include familiar organisms such as trees, herbs, bushes, grasses, vines, ferns, mosses, and green algae....
 and animal
Animal

Animals are a major group of multicellular, eukaryotic organisms of the Kingdom Animalia or Metazoa. Their body plan eventually becomes fixed as they develop, although some undergo a process of metamorphosis later on in their life....
 life.

Functions

The innate system is thought to constitute an evolutionarily older defense strategy, and is the dominant immune system found in plant
Plant

Plants are Life organisms belonging to the Kingdom Plantae. They include familiar organisms such as trees, herbs, bushes, grasses, vines, ferns, mosses, and green algae....
s, fungi, insect
Insect

Insects are the biggest class of arthropods and the only ones with wings. They are the most diverse group of animals on the planet. They are most diverse at the equator and their diversity declines toward the poles....
s, and in primitive multicellular organisms (see Other forms of innate immunity).

The major functions of the vertebrate
Vertebrate

Vertebrates are members of the subphylum Vertebrata, chordates with Vertebras or Vertebral columns. The grouping sometimes includes the hagfish, which have no vertebrae, but are genetically quite closely related to lampreys, which do have vertebrae....
 innate immune system include:
  • Recruiting immune cells to sites of infection and inflammation, through the production of chemical factors, including specialized chemical mediators, called cytokine
    Cytokine

    Cytokines are a category of signaling molecules that, like hormones and neurotransmitters, are used extensively in cell communication. They are proteins, peptides or glycoproteins....
    s.
  • Activation of the complement cascade to identify bacteria, activate cells and to promote clearance of dead cells or antibody complexes
    Immune complex

    An immune complex is the combination of an epitope with an antibody directed against that epitope. The bound antigen and the binding antibody are referred to as a single entity in this state....
    .
  • The identification and removal of foreign substances present in organs, tissues, the blood and lymph, by specialized white blood cells.
  • Activation of the adaptive immune system
    Adaptive immune system

    The adaptive immune system is composed of highly specialized, systemic cells and processes that eliminate or prevent pathogenic challenges. Thought to have arisen in the first Gnathostomata, the adaptive or "specific" immune system is activated by the ?non-specific? and evolutionarily older innate immune system ....
     through a process known as antigen presentation
    Antigen presentation

    Antigen presentation is a process in the body's immune system by which macrophages, dendritic cells and other cell types capture antigens and then enable their recognition by T-cells....
    .


Inflammation

Inflammation
Inflammation

Inflammation is the complex biological response of Blood vessel tissues to harmful stimuli, such as pathogens, damaged cells, or irritants. It is a protective attempt by the organism to remove the injurious stimuli as well as initiate the healing process for the tissue....
 is one of the first responses of the immune system to infection or irritation. Inflammation is stimulated by chemical factors released by injured cells and serves to establish a physical barrier against the spread of infection, and to promote healing of any damaged tissue following the clearance of pathogens.

Chemical factors produced during inflammation (histamine
Histamine

Histamine is a biogenic amine involved in local immune system as well as regulating physiological function in the gut and acting as a neurotransmitter....
, bradykinin
Bradykinin

Bradykinin is a nonapeptide that causes blood vessels to enlarge , and therefore causes blood pressure to lower. A class of drugs called ACE inhibitors, which are used to lower blood pressure, increase bradykinin further lowering blood pressure....
, serotonin
Serotonin

Serotonin is a monoamine neurotransmitter synthesized in serotonergic neurons in the central nervous system and enterochromaffin cells in the gastrointestinal tract of animals including humans....
, leukotriene
Leukotriene

Leukotrienes are naturally produced eicosanoid lipid signaling, which may be responsible for the effects of an inflammatory response. Leukotrienes use both autocrine signalling and paracrine signalling to regulate the body's response....
s also prostaglandin
Prostaglandin

A prostaglandin is any member of a group of lipid compounds that are derived enzymatically from fatty acids and have important functions in the animal body....
s) sensitize pain receptors, cause vasodilation
Vasodilation

Vasodilation refers to the widening of blood vessels resulting from relaxation of smooth muscle cells within the vessel walls, particularly in the large arteries, smaller arterioles and large veins....
 of the blood vessel
Blood vessel

The blood vessels are the part of the circulatory system that transport blood throughout the body. There are three major types of blood vessels: the artery, which carry the blood away from the heart, the capillary, which enable the actual exchange of water and chemicals between the blood and the tissues; and the veins, which carry blood from...
s at the scene, and attract phagocytes, especially neutrophils. Neutrophils then trigger other parts of the immune system by releasing factors that summon other leukocytes and lymphocytes.

The inflammatory response is characterized by the following symptom quintet: Redness (rubor) Heat (calor) Swelling (tumor) Pain (dolor) and possible dysfunction of the organs or tissues involved (functio laesa).

Complement system

The complement system
Complement system

The complement system is a biochemical cascade that helps clear pathogens from an organism. It is part of the larger immune system that is not adaptable and does not change over the course of an individual's lifetime; as such it belongs to the innate immunity....
 is a biochemical cascade
Biochemical cascade

A biochemical cascade is a series of chemical reactions in which the products of one reaction are consumed in the next reaction. There are several important biochemical cascade reactions in biochemistry, including the enzyme cascades, such as the coagulation#The coagulation cascade and the complement system, and the signal transduction cascad...
 of the immune system that helps, or “complements”, the ability of antibodies to clear pathogens or mark them for destruction by other cells. The cascade is composed of many plasma proteins, synthesized in the liver
Liver

The liver is a vital organ present in vertebrates and some other animals; it has a wide range of functions, a few of which are detoxification, protein synthesis, and production of biochemicals necessary for digestion....
, primarily by hepatocytes. The proteins work together to:
  • trigger the recruitment of inflammatory cells.
  • "tag" pathogens for destruction by other cells by opsonizing
    Opsonin

    An opsonin is any molecule that acts as a binding enhancer for the process of phagocytosis, for example, by coating the negatively-charged molecules on the membrane....
    , or coating, the surface of the pathogen.
  • disrupt the plasma membrane of an infected cell, resulting in cytolysis
    Cytolysis

    Cytolysis, or osmotic lysis, occurs when a cell bursts due to an osmosis that has caused excess water to move into the cell. It occurs in a Tonicity#Hypotonicity environment, where water Diffusions into the cell and causes its volume to increase....
     of the infected cell, causing the death of the pathogen.
  • rid the body of neutralized antigen-antibody complexes.


Elements of the complement cascade can be found in many species evolutionarily older than mammals including plant
Plant

Plants are Life organisms belonging to the Kingdom Plantae. They include familiar organisms such as trees, herbs, bushes, grasses, vines, ferns, mosses, and green algae....
s, bird
Bird

Birds are wing, Bipedalismal, endothermic , vertebrate animals that lay egg . There are around 10,000 living species, making them the most numerous tetrapod vertebrates....
s, fish
Fish

A fish is any marine biology vertebrate animal that is typically ectothermic , covered with scale , and equipped with two sets of paired fins and several unpaired fins....
 and some species of invertebrate
Invertebrate

An invertebrate is an animal lacking a vertebral column. The group includes 98% of all animal species ? all animals except those in the Chordate subphylum vertebrate ....
s.

Cells of the innate immune response

Sem Blood Cells
All white blood cells (WBC) are known as leukocytes. Leukocytes are different from other cells of the body in that they are not tightly associated with a particular organ or tissue; thus, they function similar to independent, single-celled organisms. Leukocytes are able to move freely and interact and capture cellular debris, foreign particles, or invading microorganisms. Unlike many other cells in the body, most innate immune leukocytes cannot divide or reproduce on their own, but are the products of pluripotent hematopoietic stem cells present in the bone marrow.

The innate leukocytes include: Natural killer cells, mast cells, eosinophils, basophils; and the phagocytic cells including macrophages, neutrophils and dendritic cells, and function within the immune system by identifying and eliminating pathogens that might cause infection.

Mast cells

Mast cells are a type of innate immune cell that resides in the connective tissue and in the mucous membranes, and are intimately associated with defense against pathogens, wound healing, but are also often associated with allergy
Allergy

Allergy is a Disorder of the immune system often also referred to as atopy. Allergic reactions occur to Natural environmental substances known as allergens; these reactions are Acquired disorder, predictable and rapid....
 and anaphylaxis
Anaphylaxis

Anaphylaxis is an acute Circulatory system and very severe Type I hypersensitivity allergy reaction in humans and other mammals. The term comes from the Greek words a?a ana and f??a??? phylaxis ....
. When activated, mast cells rapidly release characteristic granules, rich in histamine
Histamine

Histamine is a biogenic amine involved in local immune system as well as regulating physiological function in the gut and acting as a neurotransmitter....
 and heparin
Heparin

Heparin, a highly-sulfated glycosaminoglycan, is widely used as an injectable anticoagulant and has the highest negative charge density of any known biomolecule....
, along with various hormonal mediators, and chemokine
Chemokine

Chemokines are a family of small cytokines, or proteins secreted by Cell s. Proteins are classified as chemokines according to shared structural characteristics such as small size , and the presence of four cysteine residues in conserved locations that are key to forming their 3-dimensional shape....
s, or chemotactic cytokine
Cytokine

Cytokines are a category of signaling molecules that, like hormones and neurotransmitters, are used extensively in cell communication. They are proteins, peptides or glycoproteins....
s into the environment. Histamine dilates blood vessel
Blood vessel

The blood vessels are the part of the circulatory system that transport blood throughout the body. There are three major types of blood vessels: the artery, which carry the blood away from the heart, the capillary, which enable the actual exchange of water and chemicals between the blood and the tissues; and the veins, which carry blood from...
s, causing the characteristic signs of inflammation, and recruits neutrophils and macrophages.

Phagocytes

The word 'phagocyte' literally means 'eating cell'. These are immune cells that engulf, i.e. phagocytose, pathogens or particles. To engulf a particle or pathogen, a phagocyte extends portions of its plasma membrane, wrapping the membrane around the particle until it is enveloped (i.e. the particle is now inside the cell). Once inside the cell, the invading pathogen is contained inside an endosome
Endosome

In biology, an endosome is a membrane-bound compartment inside cells, roughly 300-400 Nanometre in diameter when fully mature....
 which merges with a lysosome
Lysosome

Lysosomes are organelles that contain digestive enzymes . Some biologists say they can only be found in animal cells, but there is new evidence that supports that they may exist in plant cells....
. The lysosome contains enzymes and acids that kill and digest the particle or organism. Phagocytes generally patrol the body searching for pathogens, but are also able to react to a group of highly specialized molecular signals produced by other cells, called cytokines. The phagocytic cells of the immune system include macrophages, neutrophils, and dendritic cells.

Phagocytosis of the hosts’ own cells is common as part of regular tissue development and maintenance. When host cells die, either internally induced by processes involving programmed cell death
Programmed cell death

Programmed cell-death is death of a cell in any form, mediated by an intracellular program. In contrast to necrosis, which is a form of cell-death that results from acute biological tissue injury and provokes an Inflammation response, PCD is carried out in a regulated process which generally confers advantage during an organism's life-cycle....
 (also called apoptosis
Apoptosis

Apoptosis is the process of programmed cell death that may occur in multicellular organisms. Programmed Cell death involves a series of biochemical events leading to a characteristic cell Morphology and death, in more specific terms, a series of biochemical events that lead to a variety of morphological changes, including Bleb , changes...
), or caused by cell injury due to a bacterial or viral infection, phagocytic cells are responsible for their removal from the affected site. By helping to remove dead cells preceding growth and development of new healthy cells, phagocytosis
Phagocytosis

File:Phagocytosis in three steps.pngPhagocytosis is the cell process of Phagocytes and Protists of engulfing solid particles by the cell membrane to form an internal phagosome, which is a food vacuole, or pteroid....
 is an important part of the healing process following tissue injury.
Macrophage

Macrophages
Macrophages, from the Greek, meaning "large eating cell", are large phagocytic leukocytes, which are able to move outside of the vascular system by moving across the cell membrane of capillary
Capillary

Capillaries are the smallest of a body's blood vessels, measuring 5-10 micrometre in diameter, which connect arterioles and venules, and enable the interchange of water, oxygen, carbon dioxide, and many other nutrient and waste chemical substances between blood and surrounding tissue s....
 vessels and entering the areas between cells in pursuit of invading pathogens. In tissues, organ-specific macrophages are differentiated from phagocytic cells present in the blood called monocyte
Monocyte

Monocyte is a type of leukocyte, part of the human body's immune system. Monocytes have two main functions in the immune system: replenish resident macrophages and dendritic cells under normal states, and in response to inflammation signals, monocytes can move quickly to sites of infection in the tissues and divide/differentiate into mac...
s. Macrophages are the most efficient phagocytes, and can phagocytose substantial numbers of bacteria or other cells or microbes. The binding of bacterial molecules to receptors on the surface of a macrophage triggers it to engulf and destroy the bacteria through the generation of a “respiratory burst
Respiratory burst

Respiratory burst is the rapid release of reactive oxygen species from different types of Cell .Usually it denotes the release of these chemicals from immune cells, e.g., neutrophil granulocytes and macrophages, as they come into contact with different bacterium or fungus....
”, causing the release of reactive oxygen species
Reactive oxygen species

Reactive oxygen species are ions or very small molecules that include oxygen ions, radical , and peroxides, both inorganic and organic peroxide....
. Pathogens also stimulate the macrophage to produce chemokines, which summons other cells to the site of infection.

Neutrophils
Neutrophils, along with two other cell types; eosinophils and basophils (see below), are known as granulocyte
Granulocyte

Granulocytes are a category of white blood cells characterised by the presence of Granule s in their cytoplasm. They are also called polymorphonuclear leukocytes because of the varying shapes of the cell nucleus, which is usually lobed into three segments....
s due to the presence of granules in their cytoplasm, or as polymorphonuclear cells (PMNs) due to their distinctive lobed nuclei
Cell nucleus

In cell biology, the nucleus , also sometimes referred to as the "control center", is a membrane-enclosed organelle found in all eukaryote cell ....
. Neutrophil granules contain a variety of toxic substances that kill or inhibit growth of bacteria and fungi. Similar to macrophages, neutrophils attack pathogens by activating a respiratory burst
Respiratory burst

Respiratory burst is the rapid release of reactive oxygen species from different types of Cell .Usually it denotes the release of these chemicals from immune cells, e.g., neutrophil granulocytes and macrophages, as they come into contact with different bacterium or fungus....
. The main products of the neutrophil respiratory burst are strong oxidizing agent
Oxidizing agent

An oxidizing agent can be defined as either:#a chemical compound that readily transfers oxygen atoms, or#a substance that gains electrons in a redox chemical reaction...
s including hydrogen peroxide
Hydrogen peroxide

Hydrogen peroxide is a very pale blue liquid which appears colorless in a dilute solution, slightly more viscous than water. It is a weak acid....
, free oxygen radicals and hypochlorite
Hypochlorite

The hypochlorite ion is ChlorineOxygen-. A hypochlorite compound is a chemical compound containing this group, with chlorine in oxidation state +1....
. Neutrophils are the most abundant type of phagocyte, normally representing 50 to 60% of the total circulating leukocytes, and are usually the first cells to arrive at the site of an infection. The bone marrow of a normal healthy adult produces more than 100 billion neutrophils per day, and more than 10 times that many per day during acute inflammation.

Dendritic cells
Dendritic cell
Dendritic cell

Dendritic cells are immune cells and form part of the mammalian immune system. Their main function is to process antigen material and present it on the surface to other cells of the immune system, thus functioning as antigen-presenting cells....
s (DC) are phagocytic cells present in tissues that are in contact with the external environment, mainly the skin
Skin

The skin is the outer covering of the body, also known as the epidermis. It is the largest organ of the integumentary system made up of multiple layers of epithelial biological tissue, and guards the underlying muscles, bones, ligaments and organ s....
 (where they are often called Langerhans cell
Langerhans cell

Langerhans cells are dendritic cells in the Epidermis , containing large granules called Birbeck granules. They are normally present in lymph nodes and other organs, including the stratum spinosum layer of the epidermis....
s), and the inner mucosal lining of the nose
Nose

Anatomically, a nose is a protuberance in vertebrates that houses the nostrils, or nares, which admit and expel air for Respiration in conjunction with the mouth....
, lung
Lung

The lung is the essential respiration organ in air-breathing animals, including most tetrapods, a few fish and a few snails. In mammals and the more complex life forms, the two lungs are located in the chest on either side of the heart....
s, stomach
Stomach

In most mammals, the stomach is a hollow muscular organ of the gastrointestinal tract involved in the second phase of digestion, following mastication....
 and intestine
Intestine

In anatomy, the intestine is the segment of the Gastrointestinal tract extending from the stomach to the anus and, in humans and other mammals, consists of two segments, the small intestine and the large intestine....
s. They are named for their resemblance to neuronal dendrite
Dendrite

Dendrites are the branched projections of a neuron that act to conduct the electrochemical stimulation received from other neural cells to the cell body, or Soma , of the neuron from which the dendrites project....
s, but dendritic cells are not connected to the nervous system
Nervous system

The nervous system is a Neural network of specialized cells that communicate information about an animal's surroundings and itself. It processes this information and causes reactions in other parts of the body....
. Dendritic cells are very important in the process of antigen presentation
Antigen presentation

Antigen presentation is a process in the body's immune system by which macrophages, dendritic cells and other cell types capture antigens and then enable their recognition by T-cells....
, and serve as a link between the innate and adaptive immune system
Adaptive immune system

The adaptive immune system is composed of highly specialized, systemic cells and processes that eliminate or prevent pathogenic challenges. Thought to have arisen in the first Gnathostomata, the adaptive or "specific" immune system is activated by the ?non-specific? and evolutionarily older innate immune system ....
s.
Pbeosinophil

Basophils and eosinophils

Basophils and eosinophils are cells related to the neutrophil (see above). When activated by a pathogen encounter, basophils releasing histamine
Histamine

Histamine is a biogenic amine involved in local immune system as well as regulating physiological function in the gut and acting as a neurotransmitter....
 are important in defense against parasites, and play a role in allergic reactions (such as asthma
Asthma

Asthma is a common chronic obstructive pulmonary disease, in which the Lung constrict, become inflammation, and are lined with excessive amounts of thickened mucus, often in response to one or more triggers....
). Upon activation, eosinophils secrete a range of highly toxic proteins and free radicals that are highly effective in killing bacteria and parasites, but are also responsible for tissue damage occurring during allergic reactions. Activation and toxin release by eosinophils is therefore tightly regulated to prevent any inappropriate tissue destruction.

Natural killer cells

Natural killer cells, or NK cells, are a component of the innate immune system. NK cells attack host cells that have been infected by microbes, but do not directly attack invading microbes. For example, NK cells attack and destroy tumor
Tumor

A tumor or tumour is the name for a swelling or lesion formed by an abnormal growth of cells . Tumor is not synonymous with cancer. A tumor can be Benign neoplasm, Carcinoma in situ or malignant, whereas cancer is by definition malignant....
 cells, and virus-infected cells, through a process known as "missing-self." This term describes cells with low levels of a cell-surface marker called MHC I (major histocompatibility complex
Major histocompatibility complex

The major histocompatibility complex is a large genome region or gene family found in most vertebrates. It is the most gene-dense region of the mammalian genome and plays an important role in the immune system, autoimmunity, and reproduction success....
) - a situation that can arise in viral infections of host cells. They were named "natural killer" because of the initial notion that they do not require activation in order to kill cells that are "missing self."

?d T cells

Like other 'unconventional' T cell subsets bearing invariant T cell receptor
T cell receptor

The T cell receptor or TCR is a molecule found on the surface of T lymphocytes that is, in general, responsible for recognizing antigens bound to major histocompatibility complex molecules....
s (TCRs), such as CD1d
CD1d receptor

CD1d is a member of the CD1 family of glycoproteins expressed on the surface of various human antigen-presenting cells. They are related to the class I MHC molecules, and are involved in the presentation of lipid antigens to T cells....
-restricted Natural Killer T cell
Natural Killer T cell

Natural killer T cells are a heterogeneous group of T cells that share properties of both T cells and Natural Killer cell. Many of these cells recognize the Polymorphism CD1d receptor molecule, an antigen-presenting molecule that binds self- and foreign lipids and glycolipids....
s, ?d T cells exhibit characteristics that place them at the border between innate and adaptive immunity. On one hand, ?d T cells may be considered a component of adaptive immunity
Adaptive immune system

The adaptive immune system is composed of highly specialized, systemic cells and processes that eliminate or prevent pathogenic challenges. Thought to have arisen in the first Gnathostomata, the adaptive or "specific" immune system is activated by the ?non-specific? and evolutionarily older innate immune system ....
 in that they rearrange TCR genes
V(D)J recombination

VJ recombination is a mechanism of genetic recombination that occurs in vertebrates, which randomly selects and assembles segments of genes Genetic code specific proteins with important roles in the immune system....
 to produce junctional diversity and develop a memory phenotype. However, the various subsets may also be considered part of the innate immune system where a restricted TCR or NK receptors may be used as a pattern recognition receptor
Pattern recognition receptor

Pattern recognition receptors, or PRRs, are proteins expressed by cells of the immune system to identify molecules associated with microbial pathogens or cellular stress....
. For example, according to this paradigm, large numbers of V?9/Vd2 T cells respond within hours to common molecules
Non-peptidic antigen

Non-peptidic antigens are low molecular weight compounds that stimulate human Vg9/Vd2 T cells. The most potent activator for V?9/Vd2 T cells is -4-hydroxy-3-methyl-but-2-enyl pyrophosphate , a natural intermediate of the non-mevalonate pathway of isopentenyl pyrophosphate biosynthesis....
 produced by microbes, and highly restricted intraepithelial Vd1 T cells will respond to stressed epithelial cells.

Pathogen-specificity

The parts of the innate immune system have different specificity for different pathogens.
Pathogen Main examples Phagocytosis
Phagocytosis

File:Phagocytosis in three steps.pngPhagocytosis is the cell process of Phagocytes and Protists of engulfing solid particles by the cell membrane to form an internal phagosome, which is a food vacuole, or pteroid....
 
complement
Complement system

The complement system is a biochemical cascade that helps clear pathogens from an organism. It is part of the larger immune system that is not adaptable and does not change over the course of an individual's lifetime; as such it belongs to the innate immunity....
 
NK cells
Intracellular and cytoplasmic virus
Virus

A virus is a Optical microscope#Limitations of light microscopes infectious agent that is unable to grow or reproduce outside a host cell . Viruses infect all cellular life....
 
  • influenza
    Influenza

    Influenza, commonly known as the flu, is an infectious disease that affects birds and mammals caused by RNA viruses of the biological family Orthomyxoviridae ....
  • mumps
    MUMPS

    MUMPS , or alternatively M, is a programming language created in the late 1960s, originally for use in the Health care. It was designed for the production of multi-user database-driven applications....
  • measles
    Measles

    Measles is a infection of the respiratory system caused by a virus, specifically a paramyxovirus of the genus Morbillivirus. Morbilliviruses, like other paramyxoviruses, are enveloped, single-stranded, negative-sense RNA viruses....
  • rhinovirus
    Rhinovirus

    Rhinovirus is a genus of the Picornaviridae family of viruses.Rhinoviruses are the most common viral infective agents in humans, and a causative agent of the common cold....
yes no yes
Intracellular bacteria
Bacteria

The Bacteria are a large group of unicellular microorganisms. Typically a few micrometres in length, bacteria have a wide range of shapes, ranging from spheres to rods and spirals....
 
  • Listeria monocytogenes
    Listeria monocytogenes

    Listeria monocytogenes, one of the most virulent foodborne pathogens with 20 percent of clinical infections resulting in death, is the causative agent of Listeriosis....
  • Legionella
    Legionella

    Legionella is a Gram negative bacterium, including species that cause legionellosis or Legionnaires' disease, most notably Legionella pneumophila....
  • Mycobacterium
    Mycobacterium

    Mycobacterium is a genus of Actinobacteria, given its own family, the Mycobacteriaceae. The genus includes pathogens known to cause serious diseases in mammals, including tuberculosis and leprosy....
  • Rickettsia
    Rickettsia

    Rickettsia is a genus of Motility, Gram-negative, Endospore, highly pleomorphic Bacterium that can present as cocci , rods or thread-like ....
yes (specifically neutrophils, no for rickettsia) no yes (no for rickettsia)
Extracellular bacteria
Bacteria

The Bacteria are a large group of unicellular microorganisms. Typically a few micrometres in length, bacteria have a wide range of shapes, ranging from spheres to rods and spirals....
 
  • Staphylococcus
    Staphylococcus

    Staphylococcus is a genus of Gram-positive Bacterium. Under the microscope they appear round , and form in grape-like clusters.The Staphylococcus genus include just thirty-three species....
  • Streptococcus
    Streptococcus

    Streptococcus is a genus of sphere Gram-positive bacterium belonging to the phylum Firmicutes and the lactic acid bacteria group. Cell division occurs along a single Coordinate axis in these bacteria, and thus they grow in chains or pairs, hence the name — from Greek language st?ept?? streptos, meaning easily bent or twisted,...
  • Neisseria
    Neisseria

    Neisseria is a genus of Gram bacterium included among the proteobacteria, a large group of Gram-negative forms. Neisseria are Diplococcus that resemble coffee beans when viewed microscopically....
  • Salmonella typhi
yes yes no
Intracellular protozoa
Protozoa

Protozoan are microorganisms classified as unicellular eukaryotes. While there is no exact definition of the term "protozoan", most scientists use the word to refer to a unicellular heterotrophic protist, such as an amoeba or a ciliate....
 
  • Plasmodium malariae
    Plasmodium malariae

    Introduction Plasmodium malariae is a parasite protozoa that causes malaria in humans. It is closely related to Plasmodium falciparum and Plasmodium vivax which are responsible for most malarial infection....
  • Leishmania donovani
    Leishmania

    Leishmania is a genus of trypanosome protozoa, and is the parasite responsible for the disease leishmaniasis. It is spread through sandfly of the genus Phlebotomus in the Old World, and of the genus Lutzomyia in the New World....
no no no
Extracellular protozoa
Protozoa

Protozoan are microorganisms classified as unicellular eukaryotes. While there is no exact definition of the term "protozoan", most scientists use the word to refer to a unicellular heterotrophic protist, such as an amoeba or a ciliate....
 
  • Entamoeba histolytica
    Entamoeba histolytica

    For the infection and disease caused by this parasite, refer to Amoebiasis.Entamoeba histolytica is an anaerobic organism parasitic protozoan, part of the genus Entamoeba....
  • Giardia lamblia
    Giardia lamblia

    File:Giardia life cycle en.svgGiardia lamblia is a flagellated protozoan parasite that colonises and reproduces in the small intestine, causing giardiasis....
yes yes no
Extracellular fungi
  • Candida
    Candida (genus)

    Candida is a genus of yeasts. Many species of this genus are endosymbionts of animal hosts including humans. While usually living as Commensalisms, some Candida species have the potential to cause disease....
  • Histoplasma
    Histoplasma

    'Histoplasma' is a genus of Polymorphism fungi commonly found in bird and bat fecal material. Histoplasma contains a few species, including—H....
  • Cryptococcus
    Cryptococcus

    Cryptococcus is a genus of fungus. It grows in culture as a yeast. The perfect form or teleomorph is called Filobasidiella, but the imperfect form or anamorph is called Cryptococcus....
no yes no


Innate immune evasion

Cells of the innate immune system effectively prevent free growth of bacteria within the body; however, many pathogens have evolved mechanisms allowing them to evade the innate immune system.

Evasion strategies that circumvent the innate immune system include intracellular replication, such as in Salmonella
Salmonella

Salmonella is a genus of rod-shaped Gram-negative enterobacteriaceae that causes typhoid fever, paratyphoid fever, and the foodborne illness salmonellosis....
, or a protective capsule that prevents lysis by complement and by phagocytes, as in Mycobacterium tuberculosis
Mycobacterium tuberculosis

Mycobacterium tuberculosis is a pathogenic bacterial species in the genus Mycobacterium and the causative agent of most cases of tuberculosis....
. Bacteroides
Bacteroides

Bacteroides is a genus of Gram-negative, bacillus Bacterium. Bacteroides species are non-endospore-forming, Anaerobic bacteria, and may be either motile or non-motile, depending on the species....
 species are normally commensal bacteria, making up a substantial portion of the mammalian gastrointestinal flora
Gut flora

The gut flora are the microorganisms that normally live in the digestive tract of animals. Though widely known as the "intestinal microflora", this is technically a misnomer since the word root "flora" pertains to plants and biota refers to microbial life such as bacteria other than plants....
. Some species (B. fragilis, for example) are opportunistic pathogens
Opportunistic infection

An opportunistic infection is an infection caused by pathogens that usually do not cause disease in a healthy immune system. A Immunodeficiency, however, presents an "opportunity" for the pathogen to infect....
, causing infections of the peritoneal cavity
Peritoneal cavity

The peritoneal cavity is a potential space between the parietal peritoneum and visceral peritoneum. It is one of the spaces derived from the coelomic cavity of the embryo, the others being the pleural cavities and the pericardial cavity....
. These species evade the immune system through inhibition of phagocytosis by affecting the receptors that phagocytes use to engulf bacteria or by mimicking host cells so that the immune system does not recognize them as foreign. Staphylococcus aureus
Staphylococcus aureus

Staphylococcus aureus is the most common cause of staph infections. It is a spherical Bacteria, frequently found in the nose and skin of a person....
 inhibits the ability of the phagocyte to respond to chemokine signals. Other organisms such as M. tuberculosis, Streptococcus pyogenes
Streptococcus pyogenes

'Streptococcus pyogenes' is a coccus gram-positive bacteria that grows in long chains and is the cause of Group A streptococcal infections. S....
 and Bacillus anthracis
Bacillus anthracis

Bacillus anthracis is a very large bacterium compared to others. It is a Gram-positive spore-forming rod-shaped bacterium, with a width of 1-1.2?m and a length of 3-5?m....
 utilize mechanisms that directly kill the phagocyte.

Bacteria and fungi may also form complex biofilm
Biofilm

A biofilm is a structured community of microorganisms encapsulated within a self-developed polymeric matrix and adherent to a living or inert surface....
s, providing protection from the cells and proteins of the immune system; recent studies indicate that such biofilms are present in many successful infections, including the chronic Pseudomonas aeruginosa
Pseudomonas aeruginosa

Pseudomonas aeruginosa is a common bacterium which can cause disease in animals and humans. It is found in soil, water, and most man-made environments throughout the world....
 and Burkholderia cenocepacia
Burkholderia cenocepacia

Burkholderia cenocepacia is a Gram-negative bacteria that is common in the environment and may cause disease in plants. It is an opportunistic pathogen and human infections are common in patients with cystic fibrosis and chronic granulomatous disease, and are often fatal....
 infections characteristic of cystic fibrosis
Cystic fibrosis

Cystic Fibrosis is a Genetic disorder affecting the exocrine glands of the lungs, liver, pancreas, and intestines, causing progressive disability due to multisystem failure....
.

Other forms of innate immunity


Host defense in prokaryotes

Bacteria
Bacteria

The Bacteria are a large group of unicellular microorganisms. Typically a few micrometres in length, bacteria have a wide range of shapes, ranging from spheres to rods and spirals....
 (and perhaps other prokaryotic organisms), utilize a unique defense mechanism, called the restriction modification system
Restriction modification system

The restriction modification system is used by bacteria, and perhaps other prokaryote organisms to protect themselves from foreign DNA, such as bacteriophages....
 to protect themselves from pathogens, such as bacteriophage
Bacteriophage

A bacteriophage is any one of a number of viruses that infection bacteria. The term is commonly used in its shortened form, phage.Typically, bacteriophages consist of an outer protein hull enclosing genetic material....
s. In this system, bacteria produce enzyme
Enzyme

Enzymes are biomolecules that catalysis chemical reactions. Almost all enzymes are proteins. In enzymatic reactions, the molecules at the beginning of the process are called Substrate , and the enzyme converts them into different molecules, the products....
s, called restriction endonucleases, that attack and destroy specific regions of the viral DNA
DNA

Deoxyribonucleic acid is a nucleic acid that contains the genetics instructions used in the development and functioning of all known living organisms and some viruses....
 of invading bacteriophages. Methylation
Methylation

Methylation in the chemical sciences denotes the attachment or substitution of a methyl on various Substrate . This term is commonly used in chemistry, biochemistry, soil science and the biological sciences....
 of the host's own DNA marks it as "self" and prevents it from being attacked by endonucleases. Restriction endonucleases and the restriction modification system exist exclusively in prokaryotes.

Host defense in invertebrates

Invertebrate
Invertebrate

An invertebrate is an animal lacking a vertebral column. The group includes 98% of all animal species ? all animals except those in the Chordate subphylum vertebrate ....
s do not possess lymphocytes or an antibody-based humoral immune system, and it is likely that a multicomponent, adaptive immune system arose with the first vertebrates. Nevertheless, invertebrates possess mechanisms that appear to be precursors of these aspects of vertebrate immunity. Pattern recognition receptor
Pattern recognition receptor

Pattern recognition receptors, or PRRs, are proteins expressed by cells of the immune system to identify molecules associated with microbial pathogens or cellular stress....
s
are proteins used by nearly all organisms to identify molecules associated with microbial pathogens. Toll-like receptor
Toll-like receptor

Toll-like receptors are a class of proteins that play a key role in the innate immune system. They are single membrane-spanning non-catalytic Receptor that recognize structurally conserved molecules derived from microbes....
s
are a major class of pattern recognition receptor, that exists in all coelomates (animals with a body-cavity), including humans. The complement system
Complement system

The complement system is a biochemical cascade that helps clear pathogens from an organism. It is part of the larger immune system that is not adaptable and does not change over the course of an individual's lifetime; as such it belongs to the innate immunity....
, as discussed above, is a biochemical cascade of the immune system that helps clear pathogens from an organism, and exists in most forms of life. Some invertebrates, including various insects, crab
Crab

Crabs are Decapoda crustaceans of the infraorder Brachyura, which typically have a very short projecting "tail" , or where the reduced abdomen is entirely hidden under the thorax....
s, and worm
Worm

A worm is a common name given to a diverse group of invertebrate animals that have a long, soft body and no legs. There are hundreds of thousands of species of worms, 2,700 of these are earthworms....
s utilize a modified form of the complement response known as the prophenoloxidase (proPO) system.

Antimicrobial peptides
Antimicrobial peptides

Antimicrobial peptides are an evolutionarily conserved component of the innate immune response and are found among all classes of life.These peptides are potent, broad spectrum antibiotics which demonstrate potential as novel therapeutic agents....
 are an evolutionarily conserved component of the innate immune response found among all classes of life and represent the main form of invertebrate systemic immunity
Immunity (medical)

Immunity is a medical term that describes a state of having sufficient biological defenses to avoid infection, disease, or other unwanted biological invasion....
. Several species of insect
Insect

Insects are the biggest class of arthropods and the only ones with wings. They are the most diverse group of animals on the planet. They are most diverse at the equator and their diversity declines toward the poles....
 produce antimicrobial peptides known as defensin
Defensin

File:Monomeric and dimeric representations of HBD-2.jpgDefensins are small cysteine-rich cationic proteins found in both vertebrates and invertebrates....
s
and cecropin
Cecropin

Cecropins are antimicrobial peptides.References...
s
.

Host defense in plants

Members of every class of pathogen which infect humans also infect plants. Although the exact pathogenic species vary with the infected species, bacteria, fungi, viruses, nematodes and insects can all cause plant disease
Phytopathology

For the journal, see Plant Pathology .Plant pathology is the scientific study of plant diseases caused by pathogens and environmental conditions ....
. As with animals, plants attacked by insects or other pathogens use a set of complex metabolic responses that lead to the formation of defensive chemical compounds that fight infection or make the plant less attractive to insects and other herbivore
Herbivore

Herbivory is a form of predation in which an organism, known as an herbivore, heterotrophs principally autotrophs such as plants, algae and photosynthesizing bacteria....
s. (see: plant defense against herbivory
Plant defense against herbivory

Plant defense against herbivory or host-plant resistance includes a range of adaptations evolved by plants that improve their fitness by reducing the impact of herbivores....
).

Like invertebrates, plants neither generate antibody or T-cell responses nor possess mobile cells that detect and attack pathogens. In addition, in case of infection, parts of some plants are treated as disposable and replaceable, in ways that very few animals are able to do. Walling off or discarding a part of a plant helps stop spread of an infection.

Most plant immune responses involve systemic chemical signals sent throughout a plant. Plants use pattern-recognition receptors to identify pathogens and to start a basal response, which produces chemical signals that aid in warding off infection. When a part of a plant becomes infected with a microbial or viral pathogen, in case of an incompatible interaction triggered by specific elicitors, the plant produces a localized hypersensitive response
Hypersensitive response

The hypersensitive response is a mechanism, used by plants, to prevent the spread of infection by microbial pathogens. The HR is characterized by the rapid apoptosis of cells in the local region surrounding an infection....
 (HR), in which cells at the site of infection undergo rapid programmed cell death
Programmed cell death

Programmed cell-death is death of a cell in any form, mediated by an intracellular program. In contrast to necrosis, which is a form of cell-death that results from acute biological tissue injury and provokes an Inflammation response, PCD is carried out in a regulated process which generally confers advantage during an organism's life-cycle....
 to prevent the spread of the disease to other parts of the plant. HR has some similarities to animal pyroptosis
Pyroptosis

Pyroptosis is a form of programmed cell death associated with antimicrobial responses during inflammation. In contrast to apoptosis, pyroptosis requires the function of caspase-1, and has been studied in the context of salmonella-infected macrophages....
, such as a requirement of caspase
Caspase

Caspases, or cysteine-aspartic acid proteases, are a family of cysteine proteases, which play essential roles in apoptosis , necrosis and inflammation....
-1-like proteolytic activity of VPE?, a cysteine protease
Cysteine protease

Proteases are enzymes that degrade protein. Cysteine proteases have a common catalytic mechanism that involves a nucleophile cysteine thiol in a catalytic triad....
 that regulates cell disassembly during cell death.

"Resistance" (R) proteins, encoded by R gene
R gene

R genes are genes in plant genome that convey resistance against pathogen by producing R proteins. Resistance can be conveyed through a number of mechanisms including:...
s, are widely present in plants and detect pathogens. These proteins contain domains similar to the NOD Like Receptors
Pattern recognition receptor

Pattern recognition receptors, or PRRs, are proteins expressed by cells of the immune system to identify molecules associated with microbial pathogens or cellular stress....
 and Toll-like receptor
Toll-like receptor

Toll-like receptors are a class of proteins that play a key role in the innate immune system. They are single membrane-spanning non-catalytic Receptor that recognize structurally conserved molecules derived from microbes....
s utilized in animal innate immunity. Systemic acquired resistance
Systemic acquired resistance

In plants, systemic acquired resistance is a "whole-plant" resistance response that occurs following an earlier localized exposure to a pathogen....
 (SAR) is a type of defensive response that renders the entire plant resistant to a broad spectrum of infectious agents. SAR involves the production of chemical messenger
Chemical messenger

A chemical messenger is any compound that serves to transmit a message.A chemical messenger may refer to:*Hormone, Long range chemical messenger...
s, such as salicylic acid
Salicylic acid

Salicylic acid is a beta hydroxy acid with the chemical formula C6H4COOH, where the OH group is adjacent to the carboxylic acid....
 or jasmonic acid
Jasmonic acid

Jasmonic acid is a member of the jasmonate class of plant hormones. It is biosynthesized from linolenic acid by the octadecanoid pathway.The major functions of JA in regulating plant growth include growth inhibition, senescence, and leaf abscission....
. Some of these travel through the plant and signal other cells to produce defensive compounds to protect uninfected parts, e.g., leaves. Salicylic acid itself, although indispensable for expression of SAR, is not the translocated signal responsible for the systemic response. Recent evidence indicates a role for jasmonates in transmission of the signal to distal portions of the plant. RNA silencing
RNA interference

RNA interference is a system within living cells that helps to control which genes are active and how active they are. Two types of small RNA molecules ? microRNA and small interfering RNA ? are central to RNA interference....
 mechanisms are also important in the plant systemic response, as they can block virus replication. The jasmonic acid
Jasmonic acid

Jasmonic acid is a member of the jasmonate class of plant hormones. It is biosynthesized from linolenic acid by the octadecanoid pathway.The major functions of JA in regulating plant growth include growth inhibition, senescence, and leaf abscission....
 response
, is stimulated in leaves damaged by insects, and involves the production of methyl jasmonate
Methyl jasmonate

Methyl jasmonate is a substance used in plant defense and also under early research for cancer treatment in humans. Plants produce jasmonic acid and methyl jasmonate in response to many biotic and abiotic stresses , which build up in the damaged parts of the plant....
.

See also

  • Apoptosis
    Apoptosis

    Apoptosis is the process of programmed cell death that may occur in multicellular organisms. Programmed Cell death involves a series of biochemical events leading to a characteristic cell Morphology and death, in more specific terms, a series of biochemical events that lead to a variety of morphological changes, including Bleb , changes...