All Topics  
Population genetics

 

   Email Print
   Bookmark   Link






 

Population genetics



 
 
Population genetics is the study of the allele frequency
Allele frequency

Allele frequency is the number of copies of a particular allele divided by the number of copies of all alleles at the genetic place in a population....
 distribution and change under the influence of the four evolutionary processes: natural selection
Natural selection

Natural selection is the process by which favorable heritable trait become more common in successive generations of a population of Reproduction organisms, and unfavorable heritable traits become less common, due to differential reproduction of genotypes....
, genetic drift
Genetic drift

Genetic drift or allelic drift is the change in the relative frequency with which a gene variant occurs in a population that results from the fact that alleles in offspring are a Sampling of those in the parents, and because of the role of chance in determining whether a given individual survives and reproduces....
, mutation
Mutation

In biology, mutations are changes to the nucleotide sequence of the genetic material of an organism. Mutations can be caused by copying errors in the genetic material during cell division, by exposure to ultraviolet or ionizing radiation, chemical mutagens, or virus , or can be induced by the organism, itself, by cellular processes such as s...
 and gene flow
Gene flow

In population genetics, gene flow is the transfer of alleles of genes from one population to another.Migration into or out of a population may be responsible for a marked change in allele frequencies ....
. It also takes account of population subdivision and population structure in space. As such, it attempts to explain such phenomena as adaptation and speciation
Speciation

Speciation is the evolutionary process by which new biological species arise. The biologist Orator F. Cook seems to have been the first to coin the term 'speciation' for the splitting of lineages or 'cladogenesis,' as opposed to 'anagenesis' or 'phyletic evolution' occurring within lineages....
. Population genetics was a vital ingredient in the modern evolutionary synthesis
Modern evolutionary synthesis

The modern evolutionary synthesis is a union of ideas from several biology specialties which forms a logical account of evolution. This synthesis has been generally accepted by most working biologists....
, its primary founders were Sewall Wright
Sewall Wright

Sewall Green Wright was an American geneticist known for his influential work on evolutionary theory and also for his work on path analysis . With R....
, J. B. S. Haldane
J. B. S. Haldane

John Burdon Sanderson Haldane Royal Society#Fellowship , known as Jack , was a UK-born geneticist and evolutionary biologist. He was one of the founders of population genetics....
 and R. A. Fisher
Ronald Fisher

Sir Ronald Aylmer Fisher, Fellow of the Royal Society was an England statistician, evolutionary biologist, and genetics. He was described by Anders Hald as "a genius who almost single-handedly created the foundations for modern statistical science" and Richard Dawkins described him as "the greatest of Charles Darwin successors"....
, who also laid the foundations for the related discipline of quantitative genetics
Quantitative genetics

Quantitative genetics is the study of continuous traits and its underlying mechanisms. It is effectively an extension of simple Mendelian inheritance in that the combined effect of the many underlying genes results in a Continuous probability distribution of phenotypic values....
.

Scope and theoretical considerations
Perhaps the most significant "formal" achievement of the modern evolutionary synthesis
Modern evolutionary synthesis

The modern evolutionary synthesis is a union of ideas from several biology specialties which forms a logical account of evolution. This synthesis has been generally accepted by most working biologists....
 has been the framework of mathematical population genetics.






Discussion
Ask a question about 'Population genetics'
Start a new discussion about 'Population genetics'
Answer questions from other users
Full Discussion Forum



Encyclopedia


Population genetics is the study of the allele frequency
Allele frequency

Allele frequency is the number of copies of a particular allele divided by the number of copies of all alleles at the genetic place in a population....
 distribution and change under the influence of the four evolutionary processes: natural selection
Natural selection

Natural selection is the process by which favorable heritable trait become more common in successive generations of a population of Reproduction organisms, and unfavorable heritable traits become less common, due to differential reproduction of genotypes....
, genetic drift
Genetic drift

Genetic drift or allelic drift is the change in the relative frequency with which a gene variant occurs in a population that results from the fact that alleles in offspring are a Sampling of those in the parents, and because of the role of chance in determining whether a given individual survives and reproduces....
, mutation
Mutation

In biology, mutations are changes to the nucleotide sequence of the genetic material of an organism. Mutations can be caused by copying errors in the genetic material during cell division, by exposure to ultraviolet or ionizing radiation, chemical mutagens, or virus , or can be induced by the organism, itself, by cellular processes such as s...
 and gene flow
Gene flow

In population genetics, gene flow is the transfer of alleles of genes from one population to another.Migration into or out of a population may be responsible for a marked change in allele frequencies ....
. It also takes account of population subdivision and population structure in space. As such, it attempts to explain such phenomena as adaptation and speciation
Speciation

Speciation is the evolutionary process by which new biological species arise. The biologist Orator F. Cook seems to have been the first to coin the term 'speciation' for the splitting of lineages or 'cladogenesis,' as opposed to 'anagenesis' or 'phyletic evolution' occurring within lineages....
. Population genetics was a vital ingredient in the modern evolutionary synthesis
Modern evolutionary synthesis

The modern evolutionary synthesis is a union of ideas from several biology specialties which forms a logical account of evolution. This synthesis has been generally accepted by most working biologists....
, its primary founders were Sewall Wright
Sewall Wright

Sewall Green Wright was an American geneticist known for his influential work on evolutionary theory and also for his work on path analysis . With R....
, J. B. S. Haldane
J. B. S. Haldane

John Burdon Sanderson Haldane Royal Society#Fellowship , known as Jack , was a UK-born geneticist and evolutionary biologist. He was one of the founders of population genetics....
 and R. A. Fisher
Ronald Fisher

Sir Ronald Aylmer Fisher, Fellow of the Royal Society was an England statistician, evolutionary biologist, and genetics. He was described by Anders Hald as "a genius who almost single-handedly created the foundations for modern statistical science" and Richard Dawkins described him as "the greatest of Charles Darwin successors"....
, who also laid the foundations for the related discipline of quantitative genetics
Quantitative genetics

Quantitative genetics is the study of continuous traits and its underlying mechanisms. It is effectively an extension of simple Mendelian inheritance in that the combined effect of the many underlying genes results in a Continuous probability distribution of phenotypic values....
.

Scope and theoretical considerations


Perhaps the most significant "formal" achievement of the modern evolutionary synthesis
Modern evolutionary synthesis

The modern evolutionary synthesis is a union of ideas from several biology specialties which forms a logical account of evolution. This synthesis has been generally accepted by most working biologists....
 has been the framework of mathematical population genetics. Indeed some authors (Beatty 1986) would argue that it does define the core of the modern synthesis.

Lewontin
Richard Lewontin

Richard Charles "Dick" Lewontin is an United States evolutionary biologist, geneticist and social commentator. A leader in developing the mathematical basis of population genetics and evolutionary theory, he pioneered the notion of using techniques from molecular biology such as gel electrophoresis to apply to questions of genetic variation...
 (1974) outlined the theoretical task for population genetics. He imagined two spaces: a "genotypic space" and a "phenotypic space". The challenge of a complete theory of population genetics is to provide a set of laws that predictably map a population of genotype
Genotype

The genotype is the trait we can't see. The genotype is the Genetics constitution of a cell, an organism, or an individual usually with reference to a specific character under consideration....
s (G1) to a phenotype
Phenotype

A phenotype is any observable characteristic or trait_ of an organism: such as its morphology , development, biochemical or physiological properties, or behavior....
 space (P1), where selection
Natural selection

Natural selection is the process by which favorable heritable trait become more common in successive generations of a population of Reproduction organisms, and unfavorable heritable traits become less common, due to differential reproduction of genotypes....
 takes place, and another set of laws that map the resulting population (P2) back to genotype space (G2) where Mendelian genetics can predict the next generation of genotypes, thus completing the cycle. Even leaving aside for the moment the non-Mendelian aspects revealed by molecular genetics
Molecular genetics

Molecular genetics is the field of biology which studies the structure and function of genes at a Molecule level. The field studies how the genes are transferred from generation to generation....
, this is clearly a gargantuan task. Visualizing this transformation schematically:

(adapted from Lewontin 1974, p. 12). XD

T1 represents the genetic and epigenetic laws, the aspects of functional biology, or development
Developmental biology

Developmental biology is the study of the process by which organisms grow and develop. Modern developmental biology studies the genetic control of cell growth, cellular differentiation and "morphogenesis," which is the process that gives rise to biological tissues, organ s and anatomy....
, that transform a genotype into phenotype. We will refer to this as the "genotype-phenotype map". T2 is the transformation due to natural selection, T3 are epigenetic relations that predict genotypes based on the selected phenotypes and finally T4 the rules of Mendelian genetics.

In practice, there are two bodies of evolutionary theory that exist in parallel, traditional population genetics operating in the genotype space and the biometric theory used in plant
Plant breeding

Plant breeding is the art and science of changing the genetics of plants for the benefit of humankind. Plant breeding can be accomplished through many different techniques ranging from simply selecting plants with desirable characteristics for propagation, to more complex molecular techniques ....
 and animal breeding
Animal breeding

Animal breeding is a branch of animal science that addresses the evaluation of the genetic value of domestic livestock. Selecting animals for breeding with superior EBV in growth rate, egg, meat, milk, or wool production, or have other desirable traits has revolutionized agricultural livestock production throughout the world....
, operating in phenotype space. The missing part is the mapping between the genotype and phenotype space. This leads to a "sleight of hand" (as Lewontin terms it) whereby variables in the equations of one domain, are considered parameters or constants, where, in a full-treatment they would be transformed themselves by the evolutionary process and are in reality functions of the state variables in the other domain. The "sleight of hand" is assuming that we know this mapping. Proceeding as if we do understand it is enough to analyze many cases of interest. For example, if the phenotype is almost one-to-one with genotype (sickle-cell disease
Sickle-cell disease

Sickle-cell disease or sickle-cell anaemia is a life-long blood disorder characterized by red blood cells that assume an abnormal, rigid, sickle shape....
) or the time-scale is sufficiently short, the "constants" can be treated as such; however, there are many situations where it is inaccurate.

Population geneticists


The three founders of population genetics were the Britons R.A. Fisher
Ronald Fisher

Sir Ronald Aylmer Fisher, Fellow of the Royal Society was an England statistician, evolutionary biologist, and genetics. He was described by Anders Hald as "a genius who almost single-handedly created the foundations for modern statistical science" and Richard Dawkins described him as "the greatest of Charles Darwin successors"....
 and J.B.S. Haldane and the American Sewall Wright
Sewall Wright

Sewall Green Wright was an American geneticist known for his influential work on evolutionary theory and also for his work on path analysis . With R....
. Fisher and Wright had some fundamental disagreements and a controversy about the relative roles of selection and drift continued for much of the century between the Americans and the British. The Frenchman Gustave Malécot
Gustave Malécot

Gustave Mal?cot was a France mathematician whose work on heredity had a strong influence on population genetics....
 was also important early in the development of the discipline. John Maynard Smith was Haldane's pupil, whilst W.D. Hamilton was heavily influenced by the writings of Fisher. The American George R. Price
George R. Price

George R. Price was an United States population genetics. Originally a physical chemistry and later a scientific journalism, he moved to London in 1967, where he worked in theoretical biology at the Galton Laboratory, making three important contributions: first, rederiving W.D....
 worked with both Hamilton and Maynard Smith. On the American side, Richard Lewontin
Richard Lewontin

Richard Charles "Dick" Lewontin is an United States evolutionary biologist, geneticist and social commentator. A leader in developing the mathematical basis of population genetics and evolutionary theory, he pioneered the notion of using techniques from molecular biology such as gel electrophoresis to apply to questions of genetic variation...
 and the Japanese Motoo Kimura
Motoo Kimura

, was a Japanese biologist best known for introducing the neutral theory of molecular evolution in 1968. He became one of the most influential population geneticss....
 were heavily influenced by Wright.

See also


External links

  • National Geographic: [https://www5.nationalgeographic.com/genographic/atlas.html Atlas of the Human Journey] (Haplogroup
    Haplogroup

    In the study of molecular evolution, a haplogroup is a group of similar haplotypes that share a common ancestor with a single nucleotide polymorphism mutation....
    -based human migration maps)
  • - Simulations of habitat fragmentation and population genetics online at Monash University's Virtual Laboratory.
  • (Saami & Iberian).