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Bacillus subtilis

 
Bacillus Subtilis

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Bacillus subtilis



 
 
Bacillus subtilis, known as the hay bacillus or grass bacillus, is a Gram-positive
Gram-positive

Gram-positive Bacteria are those that are stained dark blue or violet by Gram staining. This is in contrast to Gram-negative bacteria, which cannot retain the crystal violet stain, instead taking up the counterstain and appearing red or pink....
, catalase
Catalase

Catalase is a common enzyme found in nearly all living organisms which are exposed to oxygen, where it functions to catalyst the decomposition of hydrogen peroxide to water and oxygen....
-positive bacterium commonly found in soil.






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Bacillus Subtilis Gram
Bacillus Subtilis Spore
Bacillus subtilis, known as the hay bacillus or grass bacillus, is a Gram-positive
Gram-positive

Gram-positive Bacteria are those that are stained dark blue or violet by Gram staining. This is in contrast to Gram-negative bacteria, which cannot retain the crystal violet stain, instead taking up the counterstain and appearing red or pink....
, catalase
Catalase

Catalase is a common enzyme found in nearly all living organisms which are exposed to oxygen, where it functions to catalyst the decomposition of hydrogen peroxide to water and oxygen....
-positive bacterium commonly found in soil. A member of the genus
Genus

A genus is a low-level taxonomic rank used in the classification of living and fossil organisms. The taxonomic ranks are domain , kingdom , phylum, class , order , family , genus, and species....
 Bacillus
Bacillus

Bacillus is a genus of rod-shaped bacterium and a member of the division Firmicutes. Bacillus species are either obligate or facultative aerobes, and test positive for the enzyme catalase....
, B. subtilis is rod-shaped, and has the ability to form a tough, protective endospore
Endospore

An endospore is a dormancy, tough, and non-reproductive structure produced by bacteria from the Firmicute phylum. Examples include Bacillus and Clostridium....
, allowing the organism to tolerate extreme environmental conditions. Unlike several other well-known species, B. subtilis has historically been classified as an obligate aerobe
Aerobic organism

An aerobic organism or aerobe is an organism that can survive and grow in an oxygenated environment....
, though recent research has demonstrated that this is not strictly correct.

Pathogenesis


B. subtilis is not considered a human pathogen; it may contaminate food but rarely causes food poisoning
Food poisoning

Food poisoning refers to the presentation of acute illness due to the ingestion of food. It can lead to infectious diarrhea.The term usually includes:...
. B. subtilis produces the proteolytic enzyme subtilisin
Subtilisin

Subtilisin is a protease initially obtained from Bacillus subtilis.Subtilisins belong to the group of serine proteases which initiate the nucleophilic attack on the peptide bond through a serine residue at the active site....
. B. subtilis spores can survive the extreme heating that is often used to cook food, and it is responsible for causing ropiness — a sticky, stringy consistency caused by bacterial production of long-chain polysaccharide
Polysaccharide

Polysaccharides are relatively complex carbohydrates. They are polymers made up of many monosaccharides joined together by glycosidic bonds. They are therefore very large, often branched, macromolecules....
s — in spoiled bread dough.

Reproduction


B. subtilis can divide asymmetrically, producing an endospore that is resistant to environmental factors such as heat, acid, and salt, and which can persist in the environment for long periods of time. The endospore is formed at times of nutritional stress, allowing the organism to persist in the environment until conditions become favorable. Prior to the process to produce the spore the bacterium might become motile, through the production of flagella, and also take up DNA from the environment.

Chromosomal replication


B. subtilis duplicates its single circular chromosome
Chromosome

A chromosome is an organized structure of DNA and protein that is found in Cell . A chromosome is a single piece of DNA that contains many genes, regulatory sequence and other genetic sequence....
 by initiating DNA replication
DNA replication

DNA replication, the basis for heredity, is a fundamental process occurring in all living organisms to copy their DNA. This process is "semiconservative replication" in that each strand of the original double-stranded DNA molecule serves as template for the reproduction of the complementary strand....
 at a single locus, the origin (oriC). Replication proceeds bidirectionally and two replication forks progress in the clockwise and counterclockwise directions along the chromosome halves. Chromosome replication is completed when the forks reach the terminus region, which is positioned opposite to the origin on the chromosome map, and contains several short DNA sequences (Ter sites) that promote replication arrest. Specific proteins mediate all the steps in DNA replication. The comparison between the sets of proteins involved in chromosomal DNA replication in B. subtilis and in Escherichia coli
Escherichia coli

'Escherichia coli' , is a Gram negative bacterium that is commonly found in the lower gastrointestinal tract of warm-blooded animals. Most E....
 reveals both similarities and differences. Although the basic components promoting initiation, elongation, and termination of replication are well conserved, some important differences can be found (such as one bacterium missing proteins essential in the other). These differences underline the diversity in the mechanisms and strategies that various bacterial species have adopted to carry out the duplication of their genomes.

Model organism


B. subtilis has proven highly amenable to genetic manipulation, and has therefore become widely adopted as a model organism
Model organism

A model organism is a species that is extensively studied to understand particular biology phenomena, with the expectation that discoveries made in the organism model will provide insight into the workings of other organisms....
 for laboratory studies, especially of sporulation, which is a simplified example of cellular differentiation
Cellular differentiation

In developmental biology, cellular differentiation is the process by which a less specialized cell becomes a more specialized cell type. Differentiation occurs numerous times during the development of a multicellular organism as the organism changes from a single zygote to a complex system of Tissue and cell types....
. It is also heavily flagellate
Flagellate

Flagellates are cell s with one or more whip-like organelles called flagellum. Some cells in animals may be flagellate, for instance the spermatozoa of most phyla....
d, which gives B.subtilis the ability to move quite quickly. In terms of popularity as a laboratory model organism B. subtilis is often used as the Gram-positive equivalent of Escherichia coli
Escherichia coli

'Escherichia coli' , is a Gram negative bacterium that is commonly found in the lower gastrointestinal tract of warm-blooded animals. Most E....
, an extensively studied Gram-negative
Gram-negative

Gram-negative bacteria are those bacteria that do not retain crystal violet dye in the Gram staining protocol. In a Gram stain test, a counterstain is added after the crystal violet, coloring all Gram-negative bacteria with a red or pink color....
 rod.

Uses


B. subtilis is used as a soil inoculant
Soil inoculant

Soil inoculants are bacteria or fungi that are added to soils in order to enhance plant growth by either:*Freeing up soil nutrients for plant use....
 in horticulture
Horticulture

'Horticulture' is the industry and science of plant cultivation. Horticulturists work and conduct research in the disciplines of plant propagation and cultivation, Crop , plant breeding and genetic engineering, plant biochemistry, and plant physiology....
 and agriculture
Agriculture

Agriculture refers to the production of food and goods through farming and forestry. Agriculture was the key development that led to the rise of civilization, with the animal husbandry of domestication animals and plants creating food surpluses that enabled the development of more Population density and Social stratification societies....
. B. subtilis has been used for a biowarfare simulant during Project SHAD (aka Project 112).

Enzymes produced by B. subtilis and B. licheniformis
Bacillus licheniformis

Bacillus licheniformis is a bacteria commonly found in the soil. Recently, studies have also shown that it is found on bird feathers, especially chest and back plumage, and most often in ground dwelling birds and aquatic species ....
 are widely used as additives in laundry detergent
Laundry detergent

Laundry detergent, or washing powder, is a substance which is a type of detergent that is added when one is washing laundry to aid in getting the laundry cleaner....
s.

Its other uses include the following:

  • a model organism for laboratory studies
  • a strain of B. subtilis formerly known as Bacillus natto is used in the commercial production of the Japanese delicacy natto
    Natto

    is a traditional Japanese cuisine made from fermentation soybeans, popular especially for breakfast. As a rich source of protein, natto and the soybean paste miso formed a vital source of nutrition in History of Japan#Feudal_Japan_.2812th_-_19th_century.29....
     as well as the similar Korean food cheonggukjang
    Cheonggukjang

    Cheonggukjang is a fermented soybean paste used in Korean cuisine. It contains whole as well as ground soy beans....
  • B. subtilis strain QST 713 (marketed as QST 713 or Serenade) has a natural fungicidal activity, and is employed as a biological control agent
  • popular worldwide before the introduction of consumer antibiotics as an immunostimulatory agent to aid treatment of gastrointestinal and urinary tract diseases. It is still widely used in Western Europe and the Middle East as an alternative medicine
  • can convert explosives into harmless compounds of nitrogen, carbon dioxide, and water
  • plays a role in safe radionuclide waste [e.g. Thorium (IV) and Plutonium (IV)] disposal with the proton binding properties of its surfaces
  • recombinants B. subtilis str. pBE2C1 and B. subtilis str. pBE2C1AB were used in production of polyhydroxyalkanoates
    Polyhydroxyalkanoates

    Polyhydroxyalkanoates or PHAs are linear polyesters produced in nature by bacterial fermentation of sugar or lipids. They are produced by the bacteria to store carbon and energy....
     (PHA) and that they could use malt waste as carbon source for lower cost of PHA production
  • used to create amylase enzymes


Genome


B. subtilis has approximately 4,100 genes. Of these, only 192 were shown to be indispensable; another 79 were predicted to be essential as well. A vast majority of essential genes were categorized in relatively few domains of cell metabolism, with about half involved in information processing, one-fifth involved in the synthesis of cell envelope and the determination of cell shape and division, and one-tenth related to cell energetics.

History


In 1835, the bacterium was originally named Vibrio subtilis by Christian Gottfried Ehrenberg
Christian Gottfried Ehrenberg

Christian Gottfried Ehrenberg , Germany Natural history, zoologist, comparative anatomist, geologist, and microscopy, was one of the most famous and productive scientists of his time....
, and renamed Bacillus subtilis by Ferdinand Cohn
Ferdinand Cohn

Ferdinand Julius Cohn was a Germany biologist.Cohn was born in Wroclaw in the Kingdom of Prussia Province of Silesia. At the age of 10 he suffered hearing impairment....
 in 1872.. Cultures of B. subtilis were used throughout the 1950's as an alternative medicine due to the immunostimulatory effects of its cell matter, which upon digestion has been found to significantly stimulate broad spectrum immune activity including activation of specific antibody gM, IgG and IgA secretion and release of CpG dinucleotides inducing INF A/Y producing activity of Leukocytes and Cytokines important in the development of cytotoxicity towards tumor cells. It was marketed throughout America and Europe from 1946 as an immunostimulatory aid in the treatment of gut and urinary tract diseases such as Rotavirus
Rotavirus

Rotavirus is a genus of double-stranded RNA virus in the family Reoviridae. It is the leading single cause of Diarrhea among infants and young children....
 and Shigella
Shigella

Shigella is a genus of Gram-negative, Endospore rod-shaped bacterium closely related to Escherichia coli and Salmonella. The causative agent of human shigellosis, Shigella cause disease in primates, but not in other mammals....
, but declined in popularity after the introduction of cheap consumer antibiotics despite causing less chance of allergic reaction and significantly lower toxicity to normal gut flora.

See also


  • Adenylosuccinate Lyase Deficiency
    Adenylosuccinate lyase deficiency

    Adenylosuccinate lyase deficiency, also called adenylosuccinase deficiency, is a rare autosomal recessive metabolic disorder characterized by the appearance of succinylaminoimidazolecarboxamide riboside and succinyladenosine in cerebrospinal fluid, urine, and to a lesser extent in Blood plasma....
  • Guthrie test
    Guthrie test

    The Guthrie test, also known as the Guthrie bacterial inhibition assay, is a medicine test performed on newborn infants to detect phenylketonuria, an inborn error of metabolism of amino acid metabolism....


External links

  1. Subti-Wiki "up-to-date information for all genes of Bacillus subtilis"