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Drug metabolism



 
 
Drug metabolism is the metabolism
Metabolism

Metabolism is the set of chemical reactions that occur in living organisms in order to maintain life. These processes allow organisms to grow and reproduce, maintain their structures, and respond to their environments....
 of drugs
Medication

A pharmaceutical drug, also referred to as medicine or medicament, can be loosely defined as any substance intended for use in the diagnosis, cure, mitigation, treatment, or prevention of disease....
, their biochemical modification or degradation, usually through specialized enzymatic
Enzyme

Enzymes are biomolecules that catalysis chemical reactions. Almost all enzymes are proteins. In enzymatic reactions, the molecules at the beginning of the process are called Substrate , and the enzyme converts them into different molecules, the products....
 systems. This is a form of xenobiotic metabolism
Xenobiotic metabolism

Xenobiotic metabolism is the set of metabolic pathways that modify the chemical structure of xenobiotics, which are compounds foreign to an organism's normal biochemistry, such as drugs and poisons....
. Drug metabolism often converts lipophilic chemical compound
Chemical compound

A chemical compound is a Chemical substance consisting of two or more different chemical element Chemical bond together in a fixed mass ratio that can be split into simpler substances....
s into more readily excreted
Excretion

Excretion is the process of eliminating waste products of metabolism and other non-useful materials. It is an essential process in all forms of life....
 polar products. Its rate is an important determinant of the duration and intensity of the pharmacological action of drugs.

Drug
Medication

A pharmaceutical drug, also referred to as medicine or medicament, can be loosely defined as any substance intended for use in the diagnosis, cure, mitigation, treatment, or prevention of disease....
 metabolism can result in toxication
Toxication

Toxication is the process of metabolism in which the metabolite of a compound is more toxic than the parent medication or chemical.Toxication may involve:...
 or detoxication
Detoxication

Detoxication products are the major metabolites formed from most drug metabolism.There are two common patterns observed:#A drug with potent pharmacological activity is converted to a major metabolite with markedly reduced or no pharmacological activity ...
 - the activation or deactivation of the chemical. While both occur, the major metabolites of most drugs are detoxication products.

Drugs are almost all xenobiotic
Xenobiotic

A xenobiotic is a chemical which is found in an organism but which is not normally produced or expected to be present in it. It can also cover substances which are present in much higher concentrations than are usual....
s.






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Encyclopedia


Drug metabolism is the metabolism
Metabolism

Metabolism is the set of chemical reactions that occur in living organisms in order to maintain life. These processes allow organisms to grow and reproduce, maintain their structures, and respond to their environments....
 of drugs
Medication

A pharmaceutical drug, also referred to as medicine or medicament, can be loosely defined as any substance intended for use in the diagnosis, cure, mitigation, treatment, or prevention of disease....
, their biochemical modification or degradation, usually through specialized enzymatic
Enzyme

Enzymes are biomolecules that catalysis chemical reactions. Almost all enzymes are proteins. In enzymatic reactions, the molecules at the beginning of the process are called Substrate , and the enzyme converts them into different molecules, the products....
 systems. This is a form of xenobiotic metabolism
Xenobiotic metabolism

Xenobiotic metabolism is the set of metabolic pathways that modify the chemical structure of xenobiotics, which are compounds foreign to an organism's normal biochemistry, such as drugs and poisons....
. Drug metabolism often converts lipophilic chemical compound
Chemical compound

A chemical compound is a Chemical substance consisting of two or more different chemical element Chemical bond together in a fixed mass ratio that can be split into simpler substances....
s into more readily excreted
Excretion

Excretion is the process of eliminating waste products of metabolism and other non-useful materials. It is an essential process in all forms of life....
 polar products. Its rate is an important determinant of the duration and intensity of the pharmacological action of drugs.

Drug
Medication

A pharmaceutical drug, also referred to as medicine or medicament, can be loosely defined as any substance intended for use in the diagnosis, cure, mitigation, treatment, or prevention of disease....
 metabolism can result in toxication
Toxication

Toxication is the process of metabolism in which the metabolite of a compound is more toxic than the parent medication or chemical.Toxication may involve:...
 or detoxication
Detoxication

Detoxication products are the major metabolites formed from most drug metabolism.There are two common patterns observed:#A drug with potent pharmacological activity is converted to a major metabolite with markedly reduced or no pharmacological activity ...
 - the activation or deactivation of the chemical. While both occur, the major metabolites of most drugs are detoxication products.

Drugs are almost all xenobiotic
Xenobiotic

A xenobiotic is a chemical which is found in an organism but which is not normally produced or expected to be present in it. It can also cover substances which are present in much higher concentrations than are usual....
s. Other commonly used organic chemicals are also xenobiotics, and are metabolized by the same enzyme
Enzyme

Enzymes are biomolecules that catalysis chemical reactions. Almost all enzymes are proteins. In enzymatic reactions, the molecules at the beginning of the process are called Substrate , and the enzyme converts them into different molecules, the products....
s as drugs. This provides the opportunity for drug-drug and drug-chemical interactions
Drug interaction

A drug interaction is a situation in which a substance affects the activity of a medication, i.e. the effects are increased or decreased, or they produce a new effect that neither produces on its own....
 or reactions.

Phase I vs. Phase II


Phase I and Phase II reactions are biotransformation
Biotransformation

Biotransformation is the chemical modification made by an organism on a chemical compound. If this modification ends in mineral compounds like CO2, NH3+ or H2O, the biotransformation is called mineralisation....
s of chemicals that occur during drug metabolism.

Phase I reactions usually precedes Phase II, though not necessarily. During these reactions, polar bodies are either introduced or unmasked, which results in (more) polar metabolites of the original chemicals. In the case of pharmaceutical drugs, Phase I reactions can lead either to activation or inactivation of the drug.

Phase I reactions (also termed nonsynthetic reactions) may occur by oxidation, reduction
Redox

Redox describes all chemical reactions in which atoms have their oxidation number changed.This can be either a simple redox process such as the oxidation of carbon to yield carbon dioxide or the reduction of carbon by hydrogen to yield methane , or it can be a complex process such as the oxidation of sugar in the human body through a ser...
, hydrolysis
Hydrolysis

Hydrolysis is a chemical reaction during which one or more water are split into hydrogen and hydroxide ions which may go on to participate in further reactions....
, cyclization, and decyclization reactions. Oxidation involves the enzymatic addition of oxygen or removal of hydrogen, carried out by mixed function oxidases, often in the liver. These oxidative reactions typically involve a cytochrome P450
Cytochrome P450 oxidase

Cytochrome P450 is a very large and diverse superfamily of hemoproteins found in all domains of life. Cytochromes P450 use a plethora of both exogenous and endogenous compounds as substrates in enzymatic reactions....
 haemoprotein, NADPH and oxygen. The classes of pharmaceutical drugs that utilize this method for their metabolism include phenothiazines, paracetamol
Paracetamol

Paracetamol or acetaminophen is a widely used over-the-counter drug analgesic and antipyretic . It is commonly used for the relief of fever, headaches, and other minor aches and pains, and is a major ingredient in numerous common cold and Influenza remedies....
, and steroids. If the metabolites of phase I reactions are sufficiently polar, they may be readily excreted at this point. However, many phase I products are not eliminated rapidly and undergo a subsequent reaction in which an endogenous substrate combines with the newly incorporated functional group to form a highly polar conjugate.

Phase II reactions — usually known as conjugation reactions (e.g., with glucuronic acid
Glucuronic acid

Glucuronic acid is a carboxylic acid. Its structure is similar to that of glucose. However, glucuronic acid's sixth carbon is oxidized to a carboxylic acid....
, sulfonates (commonly known as sulfation) , glutathione
Glutathione

Glutathione is a tripeptide. It contains an unusual peptide linkage between the amino acid of cysteine and the carboxyl group of the glutamate side chain....
 or amino acids) — are usually detoxication
Detoxication

Detoxication products are the major metabolites formed from most drug metabolism.There are two common patterns observed:#A drug with potent pharmacological activity is converted to a major metabolite with markedly reduced or no pharmacological activity ...
 in nature, and involve the interactions of the polar functional groups of phase I metabolites. Sites on drugs where conjugation reactions occur include carboxyl (-COOH), hydroxyl
Hydroxyl

Hydroxyl in chemistry stands for a molecule consisting of an oxygen atom and a hydrogen atom connected by a covalent bond. The neutral form is a hydroxyl Radical and the hydroxyl anion is called a hydroxide....
 (-OH), amino (NH2), and sulfhydryl (-SH) groups. Products of conjugation reactions have increased molecular weight and are usually inactive unlike Phase I reactions which often produce active metabolites.

Sites


Quantitatively, the smooth endoplasmic reticulum of the liver
Liver

The liver is a vital organ present in vertebrates and some other animals; it has a wide range of functions, a few of which are detoxification, protein synthesis, and production of biochemicals necessary for digestion....
 cell is the principal organ of drug metabolism, although every biological tissue
Biological tissue

Tissue is a cellular organizational level intermediate between cells and a complete organism. Hence, a tissue is an ensemble of cells, not necessarily identical, but from the same origin, that together carry out a specific function....
 has some ability to metabolize drugs. Factors responsible for the liver's contribution to drug metabolism include that it is a large organ, that it is the first organ perfused by chemicals absorbed in the gut, and that there are very high concentrations of most drug-metabolizing enzyme systems relative to other organs. If a drug is taken into the GI tract, where it enters hepatic circulation through the portal vein, it becomes well-metabolized and is said to show the first pass effect
First pass effect

The first-pass effect is a phenomenon of drug metabolism whereby the concentration of a medication is greatly reduced before it reaches the systemic circulation....
.

Other sites of drug metabolism include epithelial cells of the gastrointestinal tract
Gastrointestinal tract

The digestive tract is the system of Organ s within multicellular animals that takes in food, digestion it to extract energy and nutrients, and expels the remaining waste....
, lung
Lung

The lung is the essential respiration organ in air-breathing animals, including most tetrapods, a few fish and a few snails. In mammals and the more complex life forms, the two lungs are located in the chest on either side of the heart....
s, kidney
Kidney

The kidneys are Organ that have numerous biological roles. Their primary role is to maintain the homeostasis balance of bodily fluids by filtering and secreting Metabolomics#Metabolitess and minerals from the blood and excreting them, along with water , as urine....
s, and the skin
Skin

The skin is the outer covering of the body, also known as the epidermis. It is the largest organ of the integumentary system made up of multiple layers of epithelial biological tissue, and guards the underlying muscles, bones, ligaments and organ s....
. These sites are usually responsible for localized toxicity reactions.

Major enzymes and pathways


Several major enzymes and pathways are involved in drug metabolism, and can be divided into Phase I and Phase II reactions:

Phase I


Oxidation

  • Cytochrome P450 monooxygenase system
    Cytochrome P450 oxidase

    Cytochrome P450 is a very large and diverse superfamily of hemoproteins found in all domains of life. Cytochromes P450 use a plethora of both exogenous and endogenous compounds as substrates in enzymatic reactions....
  • Flavin-containing monooxygenase system
  • Alcohol dehydrogenase
    Alcohol dehydrogenase

    Alcohol dehydrogenase is an enzyme discovered in the mid-1960s in Drosophila melanogaster. Since then, there has been extensive research on the enzyme....
     and aldehyde dehydrogenase
    Aldehyde dehydrogenase

    Aldehyde dehydrogenases, E.C. 1.2.1.3, are a group of enzymes that catalyse the oxidation of aldehydes.Mitochondrial Aldehyde Dehydrogenase is a polymorphic enzyme #Crabb2004 responsible for the oxidation of aldehydes to carboxylic acids, which leave the liver and are metabolized by the body?s muscle and heart #Crabb2004....
  • Monoamine oxidase
    Monoamine oxidase

    Monoamine oxidases are enzymes that catalysis the oxidation of monoamines. They are found bound to the outer membrane of mitochondria in most cell types in the body....
  • Co-oxidation by peroxidase
    Peroxidase

    Peroxidases are a large family of enzymes. A majority of peroxidase protein sequences can be found in the PeroxiBase database. Peroxidases typically catalyze a reaction of the form:...
    s


Reduction

  • NADPH-cytochrome P450 reductase
  • Reduced (ferrous) cytochrome P450


It should be noted that during reduction reactions, a chemical can enter futile cycling, in which it gains a free-radical electron, then promptly loses it to oxygen
Oxygen

Oxygen no O2 produced; 2) O2 produced, but absorbed in oceans & seabed rock; 3) O2 starts to gas out of the oceans, but is absorbed by land surfaces and formation of ozone layer; 4-5) O2 sinks filled and the gas accumulates]]...
 (to form a superoxide anion).

Hydrolysis

  • Esterase
    Esterase

    An esterase is a hydrolase enzyme that splits esters into an acid and an alcohol in a chemical reaction with water called hydrolysis.A wide range of different esterases exist that differ in their Substrate specificity, their protein structure, and their biological function....
    s and amidases
  • Epoxide hydrolase
    Epoxide hydrolase

    Epoxide hydrolase functions in detoxication during drug metabolism.It converts epoxides from the degradation of aromatic compounds to trans-dihydrodiols which can be conjugated and excreted from the body....


Phase II


Methylation
  • Methyl Transferase

Sulphation
  • Glutathione S-transferase
    Glutathione S-transferase

    The glutathione S-transferase family of enzymes comprises a long list of cytosolic, mitochondrial, and microsomal proteins that are capable of multiple reactions with a multitude of substrate s, both endogenous and xenobiotic....
    s
  • Sulfotransferase
    Sulfotransferase

    Sulfotransferases are transferase enzymes that catalyze the transfer of a sulfate group from a donor molecule to an acceptor alcohol or amine....
    s

Acetylation
  • N-acetyltransferase
    N-Acetyltransferase

    N-acetyltransferase is an enzyme that catalysis the transfer of acetyl groups from acetyl-CoA to arylamines. They have wide specificity for aromatic amines, particularly serotonin, and can also catalyze acetyl transfer between arylamines without CoA....
    s
  • Amino acid N-acyl transferases

Conjugation
  • UDP-glucuronosyltransferases
    • Mercapturic acid biosynthesis


Factors that affect Drug Metabolism


The duration and intensity of pharmacological action of most lipophilic drugs are determined by the rate they are metabolized to inactive products. The Cytochrome P450 monooxygenase system is the most important pathway in this regard. In general, anything that increases the rate of metabolism (e.g., enzyme induction) of a pharmacologically active metabolite will decrease the duration and intensity of the drug action. The opposite is also true (e.g., enzyme inhibition).

Various physiological and pathological factors can also affect drug metabolism. Physiological factors that can influence drug metabolism include age, individual variation (e.g., pharmacogenetics
Pharmacogenetics

The terms pharmacogenomics and pharmacogenetics tend to be used interchangeably, and a precise, consensus definition of either remains elusive. Pharmacogenetics is generally regarded as the study or clinical testing of genetic variation that gives rise to differing response to drugs, while pharmacogenomics is the broader application of genomi...
), enterohepatic circulation
Enterohepatic circulation

Enterohepatic circulation refers to the circulation of bile from the liver, where it is produced, to the small intestine, where it aids in digestion of fats and other substances, back to the liver....
, nutrition
Nutrition

Nutrition is the provision, to cells and organisms, of the materials necessary to support life. Many common health problems can be prevented or alleviated with good nutrition....
, intestinal flora, or sex differences.

In general, drugs are metabolized more slowly in fetal, neonatal and elderly human
Human

A human being, also human or man, is a member of a species of bipedalism primates in the family Hominidae . Mitochondrial DNA evidence indicates that modern humans originated in east Africa about 200,000 years ago....
s and animal
Animal

Animals are a major group of multicellular, eukaryotic organisms of the Kingdom Animalia or Metazoa. Their body plan eventually becomes fixed as they develop, although some undergo a process of metamorphosis later on in their life....
s than in adult
Adult

The term adult has at least three distinct meanings. It can indicate a biologically grown or mature person. It may also mean a plant, animal, or person who has reached full growth or alternatively is capable of reproduction, or a person who has attained the legally fixed age of majority; as opposed to a minor....
s.

Genetic variation (polymorphism) accounts for some of the variability in the effect of drugs. With N-acetyltransferases (involved in Phase II reactions), individual variation creates a group of people who acetylate slowly (slow acetylators) and those who acetylate quickly, split roughly 50:50 in the population of Canada
Canada

Canada is a country occupying most of northern North America, extending from the Atlantic Ocean in the east to the Pacific Ocean in the west and northward into the Arctic Ocean....
. This variation may have dramatic consequences, as the slow acetylators are more prone to dose-dependent toxicity.

Cytochrome P450 monooxygenase system enzymes can also vary across individuals, with deficiencies occurring in 1 - 30% of people, depending on their ethnic background.

Pathological factors can also influence drug metabolism, including liver
Liver

The liver is a vital organ present in vertebrates and some other animals; it has a wide range of functions, a few of which are detoxification, protein synthesis, and production of biochemicals necessary for digestion....
, kidney
Kidney

The kidneys are Organ that have numerous biological roles. Their primary role is to maintain the homeostasis balance of bodily fluids by filtering and secreting Metabolomics#Metabolitess and minerals from the blood and excreting them, along with water , as urine....
, or heart
Heart

The heart is a muscle organ in all vertebrates responsible for pumping blood through the blood vessels by repeated, rhythmic contractions, or a similar structure in annelids, mollusks, and arthropods....
 diseases.

In silico modelling and simulation methods allow drug metabolism to be predicted in virtual patient populations prior to performing clinical studies in human subjects. This can be used to identify individuals most at risk from adverse reaction.

See also

  • Drug design
    Drug design

    Drug design is the approach of finding medication by design, based on their biological targets. Typically a drug target is a key molecule involved in a particular metabolic or signalling Metabolic pathway that is specific to a disease condition or pathology, or to the infectivity or survival of a Microorganism pathogen....
  • Xenobiotic metabolism
    Xenobiotic metabolism

    Xenobiotic metabolism is the set of metabolic pathways that modify the chemical structure of xenobiotics, which are compounds foreign to an organism's normal biochemistry, such as drugs and poisons....
  • Active metabolite
  • Drug reaction testing
    Drug reaction testing

    Drug reaction testing uses a genetic test to predict how a particular person will respond to various prescription and non-prescription medications....
  • Simcyp Simulator
    Simcyp Simulator

    The Simcyp population-based ADME simulator is a modelling and simulation platform used by the pharmaceutical industry in drug discovery and development....
  • Simulations Plus
    Simulations Plus

    Simulations Plus, Inc. develops absorption, distribution, metabolism, excretion, and toxicity modeling and simulation software for the pharmaceutical and biotechnology industries....


External links