NeuroNames
Encyclopedia
NeuroNames is an integrated nomenclature for structures in the brain
and spinal cord
of the four species most studied by neuroscientists: human
, macaque
, rat
and mouse
. It offers a standard, controlled vocabulary
of common names for structures, which is suitable for unambiguous neuroanatomical indexing of information in digital databases. Terms in the standard vocabulary have been selected for ease of pronunciation, mnemonic value, and frequency of use in recent neuroscientific publications. Structures and their relations to each other are defined in terms of the standard vocabulary. Currently NeuroNames contains standard names, synonyms and definitions of some 2,500 neuroanatomical entities.
The nomenclature is maintained by the University of Washington
and is the core component of a tool called "BrainInfo". BrainInfo helps one identify structures in the brain. One can either search by a structure name or locate the structure in a brain atlas and get information such as its location in the classical brain hierarchy, images of the structure, what cells it has, its connections and genes expressed there. Information can be accessed by any of some 16,000 synonyms in eight languages.
NeuroNames is a source vocabulary of the Metathesaurus of the Unified Medical Language System
. It is described in depth in the following three scientific articles:
Brain
The brain is the center of the nervous system in all vertebrate and most invertebrate animals—only a few primitive invertebrates such as sponges, jellyfish, sea squirts and starfishes do not have one. It is located in the head, usually close to primary sensory apparatus such as vision, hearing,...
and spinal cord
Spinal cord
The spinal cord is a long, thin, tubular bundle of nervous tissue and support cells that extends from the brain . The brain and spinal cord together make up the central nervous system...
of the four species most studied by neuroscientists: human
Human
Humans are the only living species in the Homo genus...
, macaque
Macaque
The macaques constitute a genus of Old World monkeys of the subfamily Cercopithecinae. - Description :Aside from humans , the macaques are the most widespread primate genus, ranging from Japan to Afghanistan and, in the case of the barbary macaque, to North Africa...
, rat
Rat
Rats are various medium-sized, long-tailed rodents of the superfamily Muroidea. "True rats" are members of the genus Rattus, the most important of which to humans are the black rat, Rattus rattus, and the brown rat, Rattus norvegicus...
and mouse
Mouse
A mouse is a small mammal belonging to the order of rodents. The best known mouse species is the common house mouse . It is also a popular pet. In some places, certain kinds of field mice are also common. This rodent is eaten by large birds such as hawks and eagles...
. It offers a standard, controlled vocabulary
Controlled vocabulary
Controlled vocabularies provide a way to organize knowledge for subsequent retrieval. They are used in subject indexing schemes, subject headings, thesauri, taxonomies and other form of knowledge organization systems...
of common names for structures, which is suitable for unambiguous neuroanatomical indexing of information in digital databases. Terms in the standard vocabulary have been selected for ease of pronunciation, mnemonic value, and frequency of use in recent neuroscientific publications. Structures and their relations to each other are defined in terms of the standard vocabulary. Currently NeuroNames contains standard names, synonyms and definitions of some 2,500 neuroanatomical entities.
The nomenclature is maintained by the University of Washington
University of Washington
University of Washington is a public research university, founded in 1861 in Seattle, Washington, United States. The UW is the largest university in the Northwest and the oldest public university on the West Coast. The university has three campuses, with its largest campus in the University...
and is the core component of a tool called "BrainInfo". BrainInfo helps one identify structures in the brain. One can either search by a structure name or locate the structure in a brain atlas and get information such as its location in the classical brain hierarchy, images of the structure, what cells it has, its connections and genes expressed there. Information can be accessed by any of some 16,000 synonyms in eight languages.
NeuroNames is a source vocabulary of the Metathesaurus of the Unified Medical Language System
Unified Medical Language System
The Unified Medical Language System is a compendium of many controlled vocabularies in the biomedical sciences . It provides a mapping structure among these vocabularies and thus allows one to translate among the various terminology systems; it may also be viewed as a comprehensive thesaurus and...
. It is described in depth in the following three scientific articles: