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Pentose phosphate pathway

 

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Pentose phosphate pathway



 
 
The pentose phosphate pathway (also called Phosphogluconate Pathway, or Hexose Monophosphate Shunt [HMP shunt]) is a process that serves to generate NADPH and the synthesis of pentose (5-carbon
Carbon

Carbon is a chemical element with chemical symbol C and atomic number 6. As a member of group 14 on the periodic table, it is nonmetallic and tetravalence?making four electrons available to form covalent bond chemical bonds....
) sugar
Sugar

Sugar is a class of edible crystalline substances, mainly sucrose, lactose, and fructose. Human taste buds interpret its flavor as sweet. Sugar as a basic food carbohydrate primarily comes from sugar cane and from sugar beet, but also appears in fruit, honey, sorghum, sugar maple , and in many other sources....
s. There are two distinct phases in the pathway. The first is the oxidative phase, in which NADPH is generated, and the second is the non-oxidative synthesis of 5-carbon sugars. This pathway is an alternative to glycolysis
Glycolysis

Glycolysis is the metabolic pathway that converts glucose, C6H12O6, into pyruvate, C3H5O3-....
.






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The pentose phosphate pathway (also called Phosphogluconate Pathway, or Hexose Monophosphate Shunt [HMP shunt]) is a process that serves to generate NADPH and the synthesis of pentose (5-carbon
Carbon

Carbon is a chemical element with chemical symbol C and atomic number 6. As a member of group 14 on the periodic table, it is nonmetallic and tetravalence?making four electrons available to form covalent bond chemical bonds....
) sugar
Sugar

Sugar is a class of edible crystalline substances, mainly sucrose, lactose, and fructose. Human taste buds interpret its flavor as sweet. Sugar as a basic food carbohydrate primarily comes from sugar cane and from sugar beet, but also appears in fruit, honey, sorghum, sugar maple , and in many other sources....
s. There are two distinct phases in the pathway. The first is the oxidative phase, in which NADPH is generated, and the second is the non-oxidative synthesis of 5-carbon sugars. This pathway is an alternative to glycolysis
Glycolysis

Glycolysis is the metabolic pathway that converts glucose, C6H12O6, into pyruvate, C3H5O3-....
. While it does involve oxidation of glucose
Glucose

Glucose , a monosaccharide also known as grape sugar, blood sugar, or corn sugar, is a very important carbohydrate in biology....
, its primary role is anabolic rather than catabolic. For most organisms it takes place in the cytosol
Cytosol

The cytosol or intracellular fluid is the liquid found inside cell . In eukaryotes this liquid is separated by cell membranes from the contents of the organelles suspended in the cytosol, such as the mitochondrial matrix inside the mitochondrion....
; in plants most steps take place in plastid
Plastid

Plastids are major organelles found in plants and algae. Plastids are the site of manufacture and storage of important chemical compounds used by the cell....
s.

Uses

The primary functions of the pathway are:

  • To generate reducing equivalents, in the form of NADPH, for reductive biosynthesis reactions within cells.
  • To provide the cell with ribose-5-phosphate (R5P) for the synthesis of the nucleotides and nucleic acids.
  • Although not a significant function of the PPP, it can operate to metabolize dietary pentose sugars derived from the digestion of nucleic acids as well as to rearrange the carbon skeletons of dietary carbohydrates into glycolytic/gluconeogenic intermediates.


Located exclusively in the cytoplasm, the pathway is one of the three main ways the body creates molecules with reducing power, accounting for approximately 60% of NADPH production in humans.

One of the uses of NADPH in the cell is to prevent oxidative stress
Oxidative stress

Oxidative stress is caused by an imbalance between the production of reactive oxygen species and a biological system's ability to readily detoxify the reactive intermediates or easily repair the resulting damage....
. It reduces glutathione
Glutathione

Glutathione is a tripeptide. It contains an unusual peptide linkage between the amino acid of cysteine and the carboxyl group of the glutamate side chain....
 via glutathione reductase
Glutathione reductase

Glutathione reductase, also known as GSR, is a human gene.The protein encoded by this gene is an enzyme which reduces glutathione disulfide to the Thiol form GSH, which is an important cellular antioxidant....
, which converts reactive H2O2 into H2O by glutathione peroxidase
Glutathione peroxidase

Glutathione peroxidase is the general name of an enzyme family with peroxidase activity whose main biological role is to protect the organism from oxidative damage....
. If absent, the H2O2 would be converted to hydroxyl free radicals by fenton chemistry
Fenton's reagent

Fenton's reagent is a solution of hydrogen peroxide and an iron catalyst that is used to oxidize contaminants or waste waters. Fenton's reagent can be used to destroy organic compounds such as trichloroethylene and tetrachloroethylene ....
, which can attack the cell.

Significantly, erythrocytes utilize the reactions of the PPP to generate large amounts of NADPH used in the reduction of glutathione

It is also used to generate hydrogen peroxide
Hydrogen peroxide

Hydrogen peroxide is a very pale blue liquid which appears colorless in a dilute solution, slightly more viscous than water. It is a weak acid....
 for phagocytes.

Phases


Oxidative phase

In this phase, two molecules of NADP+ are reduced to NADPH, utilizing the energy from the conversion of glucose-6-phosphate
Glucose-6-phosphate

Glucose 6-phosphate is glucose sugar phosphorylated on carbon 6. This compound is very common in cell as the vast majority of glucose entering a cell will become phosphorylated in this way....
 into ribulose 5-phosphate
Ribulose 5-phosphate

Ribulose 5-phosphate is one of the end products of the pentose phosphate pathway. It is also an intermediate in the Calvin cycle.It is formed by phosphogluconate dehydrogenase, and it can be acted upon by phosphopentose isomerase and phosphopentose epimerase....
.

Pentosephosphatepathway Oxidativenadph
The entire set of reactions can be summarized as follows:

| Reactants || Products || Enzyme || Description |- | Glucose 6-phosphate + NADP+ || → 6-phosphoglucono-δ-lactone + NADPH || glucose 6-phosphate dehydrogenase || Dehydrogenation
Dehydrogenation

Dehydrogenation is a chemical reaction that involves the elimination of hydrogen . It is the reverse process of hydrogenation. Dehydrogenation reactions may be either large scale industrial processes or smaller scale laboratory procedures....
. The hemiacetal hydroxyl group located on carbon 1 of glucose 6-phosphate is converted into a carbonyl group, generating a lactone, and, in the process, NADPH is generated. |- | 6-phosphoglucono-δ-lactone + H2O || → 6-phosphogluconate
6-Phosphogluconate

6-Phosphogluconate is an intermediate in the pentose phosphate pathway and the Entner-Doudororoff pathway.It is formed by 6-phosphogluconolactonase, and acted upon by phosphogluconate dehydrogenase to produce Ribulose 5-phosphate....
 + H+ || 6-phosphogluconolactonase
6-phosphogluconolactonase

6-phosphogluconolactonase is an enzyme in the pentose phosphate pathway. It converts 6-phosphogluconolactone to 6-phosphogluconate....
 || Hydrolysis
Hydrolysis

Hydrolysis is a chemical reaction during which one or more water are split into hydrogen and hydroxide ions which may go on to participate in further reactions....
|- | 6-phosphogluconate
6-Phosphogluconate

6-Phosphogluconate is an intermediate in the pentose phosphate pathway and the Entner-Doudororoff pathway.It is formed by 6-phosphogluconolactonase, and acted upon by phosphogluconate dehydrogenase to produce Ribulose 5-phosphate....
 + NADP+ || → ribulose 5-phosphate
Ribulose 5-phosphate

Ribulose 5-phosphate is one of the end products of the pentose phosphate pathway. It is also an intermediate in the Calvin cycle.It is formed by phosphogluconate dehydrogenase, and it can be acted upon by phosphopentose isomerase and phosphopentose epimerase....
 + NADPH + CO2 || 6-phosphogluconate dehydrogenase || Oxidative decarboxylation
Decarboxylation

Decarboxylation is any chemical reaction in which a carboxyl group is split off from a compound as carbon dioxide ....
. NADP+ is the electron acceptor, generating another molecule of NADPH, a CO2, and ribulose 5-phosphate
Ribulose 5-phosphate

Ribulose 5-phosphate is one of the end products of the pentose phosphate pathway. It is also an intermediate in the Calvin cycle.It is formed by phosphogluconate dehydrogenase, and it can be acted upon by phosphopentose isomerase and phosphopentose epimerase....
. |- |}

The overall reaction for this process is:
Glucose 6-phosphate + 2 NADP+ + H2O → ribulose 5-phosphate + 2 NADPH + 2 H+ + CO2


Non-oxidative phase


Reactants Products Enzymes >- | ribulose 5-phosphate
Ribulose 5-phosphate

Ribulose 5-phosphate is one of the end products of the pentose phosphate pathway. It is also an intermediate in the Calvin cycle.It is formed by phosphogluconate dehydrogenase, and it can be acted upon by phosphopentose isomerase and phosphopentose epimerase....
 
ribose 5-phosphate
Ribose 5-phosphate

Ribose 5-phosphate is both a product and an intermediate of the pentose phosphate pathway. The last step of the oxidative reactions in the pentose phosphate pathway is the production of ribulose-5-phosphate....
 
- | ribulose 5-phosphate
Ribulose 5-phosphate

Ribulose 5-phosphate is one of the end products of the pentose phosphate pathway. It is also an intermediate in the Calvin cycle.It is formed by phosphogluconate dehydrogenase, and it can be acted upon by phosphopentose isomerase and phosphopentose epimerase....
 
xylulose 5-phosphate
Xylulose 5-phosphate

D-Xylulose 5-phosphate is an intermediate in the pentose phosphate pathway. It is a ketose sugar formed from ribulose-5-phosphate....
 
- | xylulose 5-phosphate
Xylulose 5-phosphate

D-Xylulose 5-phosphate is an intermediate in the pentose phosphate pathway. It is a ketose sugar formed from ribulose-5-phosphate....
 + ribose 5-phosphate
Ribose 5-phosphate

Ribose 5-phosphate is both a product and an intermediate of the pentose phosphate pathway. The last step of the oxidative reactions in the pentose phosphate pathway is the production of ribulose-5-phosphate....
 
glyceraldehyde 3-phosphate
Glyceraldehyde 3-phosphate

Glyceraldehyde 3-phosphate, also known as triose phosphate or 3-phosphoglyceraldehyde and abbreviated as G3P, GADP, GAP, TP, GALP or PGAL, is a chemical compound that occurs as an intermediate in several central metabolic pathways of all organisms....
 + sedoheptulose 7-phosphate
Sedoheptulose 7-phosphate

Sedoheptulose 7-phosphate is an intermediate in the pentose phosphate pathway.It is formed by transketolase and acted upon by transaldolase....
 
transketolase
Transketolase

Transketolase, an enzyme of both the pentose phosphate pathway in animals and the Calvin cycle of photosynthesis, catalyzes two important reactions, which operate in opposite directions in these two pathways....
|- | sedoheptulose 7-phosphate
Sedoheptulose 7-phosphate

Sedoheptulose 7-phosphate is an intermediate in the pentose phosphate pathway.It is formed by transketolase and acted upon by transaldolase....
 + glyceraldehyde 3-phosphate
Glyceraldehyde 3-phosphate

Glyceraldehyde 3-phosphate, also known as triose phosphate or 3-phosphoglyceraldehyde and abbreviated as G3P, GADP, GAP, TP, GALP or PGAL, is a chemical compound that occurs as an intermediate in several central metabolic pathways of all organisms....
 
erythrose 4-phosphate
Erythrose 4-phosphate

Erythrose 4-phosphate is an intermediate in the pentose phosphate pathway and the Calvin cycle....
 + fructose 6-phosphate
Fructose 6-phosphate

Fructose 6-phosphate is fructose sugar phosphorylated on carbon 6 . The ?-D-form of this compound is very common in cell . The vast majority of glucose and fructose entering a cell will become converted to this at some point....
 
transaldolase
Transaldolase

Transaldolase is an enzyme of the non-oxidative phase of the pentose phosphate pathway. In humans, transaldolase is encoded by the TALDO1 gene....
|- | xylulose 5-phosphate
Xylulose 5-phosphate

D-Xylulose 5-phosphate is an intermediate in the pentose phosphate pathway. It is a ketose sugar formed from ribulose-5-phosphate....
 + erythrose 4-phosphate
Erythrose 4-phosphate

Erythrose 4-phosphate is an intermediate in the pentose phosphate pathway and the Calvin cycle....
 
glyceraldehyde 3-phosphate
Glyceraldehyde 3-phosphate

Glyceraldehyde 3-phosphate, also known as triose phosphate or 3-phosphoglyceraldehyde and abbreviated as G3P, GADP, GAP, TP, GALP or PGAL, is a chemical compound that occurs as an intermediate in several central metabolic pathways of all organisms....
 + fructose 6-phosphate
Fructose 6-phosphate

Fructose 6-phosphate is fructose sugar phosphorylated on carbon 6 . The ?-D-form of this compound is very common in cell . The vast majority of glucose and fructose entering a cell will become converted to this at some point....
 
transketolase
Transketolase

Transketolase, an enzyme of both the pentose phosphate pathway in animals and the Calvin cycle of photosynthesis, catalyzes two important reactions, which operate in opposite directions in these two pathways....


Regulation


Glucose-6-phosphate dehydrogenase
Glucose-6-phosphate dehydrogenase

Glucose-6-phosphate dehydrogenase is a cytosolic enzyme in the pentose phosphate pathway , a metabolic pathway that supplies reducing energy to cells by maintaining the level of the co-enzyme nicotinamide adenine dinucleotide ....
 is the rate-controlling enzyme of this pathway. It is allosterically stimulated by NADP+. The ratio of NADPH:NADP+ is normally about 100:1 in liver cytosol. This makes the cytosol a highly-reducing environment. Formation of NADP+ by a NADPH-utilizing pathway, thus, stimulates production of more NADPH.

See also

  • G6PDH deficiency
    Glucose-6-phosphate dehydrogenase deficiency

    Glucose-6-phosphate dehydrogenase deficiency is an X-linked recessive hereditary disease characterised by abnormally low levels of glucose-6-phosphate dehydrogenase , a metabolic enzyme involved in the pentose phosphate pathway, especially important in red blood cell metabolism....
     - A hereditary disease that disrupts the pentose phosphate pathway
  • NADPH
  • RNA
    RNA

    Ribonucleic acid is a type of molecule that consists of a long chain of nucleotide units. Each nucleotide consists of a nucleobase, a ribose sugar, and a phosphate....
  • thiamine deficiency


Erythrocytes and the Pentose Phosphate Pathway

The predominant pathways of carbohydrate metabolism in the red blood cell (RBC) are glycolysis, the PPP and 2,3-bisphosphoglycerate (2,3-BPG) metabolism (refer to discussion of hemoglobin for review of role of 2,3-BPG). Glycolysis provides ATP for membrane ion pumps and NADH for re-oxidation of methemoglobin. The PPP supplies the RBC with NADPH to maintain the reduced state of glutathione. The inability to maintain reduced glutathione in RBCs leads to increased accumulation of peroxides, predominantly H2O2, that in turn results in a weakening of the cell membrane and concomitant hemolysis. Accumulation of H2O2 also leads to increased rates of oxidation of hemoglobin to methemoglobin that also weakens the cell wall. Glutathione removes peroxides via the action of glutathione peroxidase. The PPP in erythrocytes is essentially the only pathway for these cells to produce NADPH. Any defect in the production of NADPH could, therefore, have profound effects on erythrocyte survival. Several deficiencies in the level of activity (not function) of glucose-6-phosphate dehydrogenase have been observed to be associated with resistance to the malarial parasite, Plasmodium falciparum, among individuals of Mediterranean and African descent. The basis for this resistance is the weakening of the red cell membrane (the erythrocyte is the host cell for the parasite) such that it cannot sustain the parasitic life cycle long enough for productive growth.

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