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Microbiology



 
 
Microbiology (from Greek
Ancient Greek

Ancient Greek is the historical stage in the development of the Greek language spanning across the Archaic Greece , Classical Greece , and Hellenistic civilization periods of ancient Greece and the classical antiquity....
 , mikros, "small"; , bios, "life
Life

Life is a characteristic of organisms that exhibit certain biological processes such as chemical reactions or other events that results in a transformation....
"; and , -logia
-logy

-logy is a suffix in English language, found in words originally adapted from Ancient Greek words ending in -????a . The earliest English examples were anglicizations of the French language -logie, which was in turn inherited from the Latin language -logia....
) is the study of microorganisms, which are unicellular or cell-cluster microscopic
Microscopic

Microscopic is a term used to describe objects smaller than those that can easily be seen by the naked eye and which require a lens or microscope to see them clearly....
 organism
Organism

In biology, an organism is any life thing . In at least some form, all organisms are capable of response to stimulus , reproduction, growth and developmental biology, and maintenance of homeostasis as a stable whole....
s. This includes eukaryote such as fungi and protists, and prokaryote
Prokaryote

The prokaryotes are a group of organisms that lack a cell nucleus , or any other cell membrane-bound organelles. They differ from the eukaryotes, which have a cell nucleus....
s, which are bacteria
Bacteria

The Bacteria are a large group of unicellular microorganisms. Typically a few micrometres in length, bacteria have a wide range of shapes, ranging from spheres to rods and spirals....
 and archaea
Archaea

The Archaea are a group of single-celled microorganisms. A single individual or species from this domain is called an archaeon . Archaea, like bacteria, are prokaryotic....
.






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Agar Plate With Colonies
Microbiology (from Greek
Ancient Greek

Ancient Greek is the historical stage in the development of the Greek language spanning across the Archaic Greece , Classical Greece , and Hellenistic civilization periods of ancient Greece and the classical antiquity....
 , mikros, "small"; , bios, "life
Life

Life is a characteristic of organisms that exhibit certain biological processes such as chemical reactions or other events that results in a transformation....
"; and , -logia
-logy

-logy is a suffix in English language, found in words originally adapted from Ancient Greek words ending in -????a . The earliest English examples were anglicizations of the French language -logie, which was in turn inherited from the Latin language -logia....
) is the study of microorganisms, which are unicellular or cell-cluster microscopic
Microscopic

Microscopic is a term used to describe objects smaller than those that can easily be seen by the naked eye and which require a lens or microscope to see them clearly....
 organism
Organism

In biology, an organism is any life thing . In at least some form, all organisms are capable of response to stimulus , reproduction, growth and developmental biology, and maintenance of homeostasis as a stable whole....
s. This includes eukaryote such as fungi and protists, and prokaryote
Prokaryote

The prokaryotes are a group of organisms that lack a cell nucleus , or any other cell membrane-bound organelles. They differ from the eukaryotes, which have a cell nucleus....
s, which are bacteria
Bacteria

The Bacteria are a large group of unicellular microorganisms. Typically a few micrometres in length, bacteria have a wide range of shapes, ranging from spheres to rods and spirals....
 and archaea
Archaea

The Archaea are a group of single-celled microorganisms. A single individual or species from this domain is called an archaeon . Archaea, like bacteria, are prokaryotic....
. Virus
Virus

A virus is a Optical microscope#Limitations of light microscopes infectious agent that is unable to grow or reproduce outside a host cell . Viruses infect all cellular life....
es, though not strictly classed as living organisms, are also studied. In short; microbiology refers to the study of life and organisms that are too small to be seen with the naked eye.

Microbiology is a broad term which includes virology
Virology

Virology is the study of virus : their structure, classification and evolution, their ways to infect and exploit cell for virus reproduction, the diseases they cause, the techniques to isolate and culture them, and their use in research and therapy....
, mycology
Mycology

Mycology is the branch of biology concerned with the study of fungus, including their genetics and biochemistry properties, their taxonomy, and ethnomycology as a source for tinder, medicine , food , entheogens, as well as their dangers, such as poisoning or infection....
, parasitology
Parasitology

Parasitology is the study of parasites, their host s, and the relationship between them. As a List of biology disciplines, the scope of parasitology is not determined by the organism or environment in question, but by their way of life....
, bacteriology and other branches. A microbiologist
Microbiologist

A microbiologist is a scientist who works in the field of microbiology. Most have a university degree in the subject.Specialists in the broad field of microbiology include:...
 is a specialist in microbiology.

Microbiology is researched actively, and the field is advancing continually. We have probably only studied about one percent of all of the microbe species on Earth. Although microbes were first observed over three hundred years ago, the field of microbiology can be said to be in its infancy relative to older biological disciplines such as zoology
Zoology

Zoology is the branch of biology concerned with the study of animals. The most common pronunciation of "zoology" is ; however, an alternative pronunciation is ....
 and botany
Botany

Botany, plant science, phytology, or plant biology is a branch of biology and is the Scientific method of plant life and development....
.

History


Ancient


The existence of microorganism
Microorganism

A microorganism or microbe is an organism that is microscopic . The study of microorganisms is called microbiology, a subject that began with Anton van Leeuwenhoek's discovery of microorganisms in 1675, using a microscope of his own design....
s was hypothesized for many centuries before their actual discovery in the 17th century. In 600 BCE, the ancient Indian surgeon Susruta held microbes responsible for several diseases and explained in Sushruta Samhita
Sushruta Samhita

The Sushruta Samhita is a Sanskrit text on surgery, attributed to Sushruta, , the "father of Surgery". The original manuscript has not survived, and only "copies of copies and revisions of revisions" exist....
 that they can be transmitted through contact, air or water. Theories on microorganisms was made by Roman
Ancient Rome

Ancient Rome was a civilization that grew out of a small agricultural community founded on the Italian Peninsula as early as the 10th century BC....
 scholar Marcus Terentis Varro in a book titled On Agriculture in which he warns against locating a homestead in the vicinity of swamps:

This passage seems to indicate that the ancients were aware of the possibility that diseases could be spread by yet unseen organisms.

In The Canon of Medicine
The Canon of Medicine

The Canon of Medicine is a 14-volume Islamic medicine written by a Science in medieval Islam and physician Avicenna and completed in 1025....
 (1020), Abu Ali ibn Sina (Avicenna) stated that bodily secretion
Secretion

Secretion is the process of, elaborating and releasing Chemical compound from a cell , or a secreted chemical substance or amount of substance. In contrast to excretion, the substance may have a certain function, rather than being a waste product....
 is contaminated by foul foreign earthly bodies before being infected. He also hypothesized on the contagious nature of tuberculosis
Tuberculosis

Tuberculosis is a common and often deadly infectious disease caused by mycobacterium, mainly Mycobacterium tuberculosis . Tuberculosis usually attacks the lungs but can also affect the central nervous system, the lymphatic system, the circulatory system, the genitourinary system, the gastrointestinal system, bones, joints, and even the...
 and other infectious disease
Infectious disease

An infectious disease is a clinically evident disease resulting from the presence of pathogenic microbial agents, including pathogenic viruses, pathogenic bacteria, Mycosis, protozoa, multicellular parasites, and aberrant proteins known as prions....
s, and used quarantine
Quarantine

Quarantine is voluntary or compulsory isolation, typically to contain the spread of something considered dangerous, often but not always disease....
 as a means of limiting the spread of contagious diseases.

When the Black Death
Black Death

The Black Death, was one of the deadliest pandemics in human history, widely thought to have been caused by a bacterium named Yersinia pestis , but recently attributed by some factors to other diseases....
 bubonic plague
Bubonic plague

Plague is a deadly infectious disease caused by the Enterobacteriaceae Yersinia pestis . Plague is a zoonotic, primarily carried by rodents and spread to humans via fleas....
 reached al-Andalus
Al-Andalus

Al-Andalus was the Arabic name given to the parts of the Iberian Peninsula governed by Arab Muslims, at various times in the period between 711 and 1492....
 in the 14th century, Ibn Khatima hypothesized that infectious diseases are caused by "minute bodies" which enter the human body and cause disease.

In 1546 Girolamo Fracastoro
Girolamo Fracastoro

Girolamo Fracastoro was an Republic of Venice physician, scholar , poet and atomist.Born of an ancient family in Verona, and educated at Padua where at 19 he was appointed professor at the University of Padua....
 proposed that epidemic
Epidemic

In epidemiology, an infection that is epidemic appears as new cases in a given human population, during a given period, at a rate that substantially exceeds what is "expected," based on recent experience ....
 diseases were caused by transferable seedlike entities that could transmit infection by direct or indirect contact or even without contact over long distances.

All these early claims about the existence of microorganisms were speculative
Speculative

Speculative may refer to:*For economics usage, see Speculation*For usage in literature, see Speculative fiction*For philosophical usage, see Speculative philosophy and Speculative reason...
 in nature and not based on any data or science. Microorganisms were neither proven, observed, and correctly and accurately described until the 17th century. The reason for this was that all these early inquiries lacked the most fundamental tool in order for microbiology and bacteriology to exist as a science, and that was the microscope
Microscope

A microscope is an Laboratory equipment for viewing objects that are too small to be seen by the naked or unaided eye. The science of investigating small objects using such an instrument is called microscopy....
.

Modern


Bacteria
Bacteria

The Bacteria are a large group of unicellular microorganisms. Typically a few micrometres in length, bacteria have a wide range of shapes, ranging from spheres to rods and spirals....
, and other microorganisms, were first observed by Antonie van Leeuwenhoek in 1676 using a single-lens microscope of his own design. In doing so Leeuwenhoek made one of the most important discoveries in biology
Biology

Biology is a branch of the natural sciences concerned with the study of living organisms and their interaction with each other and their environment ....
 and initiated the scientific fields of bacteriology and microbiology. The name "bacterium" was introduced much later, by Ehrenberg
Christian Gottfried Ehrenberg

Christian Gottfried Ehrenberg , Germany Natural history, zoologist, comparative anatomist, geologist, and microscopy, was one of the most famous and productive scientists of his time....
 in 1828, derived from the Greek
Greek language

Greek is an Indo-European languages native to the southern Balkan peninsula, the language of the Greek people. It forms an independent branch within Indo-European....
 ßa?t????? meaning "small stick". While Van Leeuwenhoek is often cited as the first microbiologist
Microbiologist

A microbiologist is a scientist who works in the field of microbiology. Most have a university degree in the subject.Specialists in the broad field of microbiology include:...
, the first recorded microbiological observation, that of the fruiting bodies of mold
Mold

Molds include all species of microscopic fungi that grow in the form of Multicellular organism filaments, called hyphae. In contrast, microscopic fungi that grow as single cells are called yeasts....
s, was made earlier in 1665 by Robert Hooke
Robert Hooke

Robert Hooke, Fellow of the Royal Society was an England natural philosopher and polymath who played an important role in the scientific revolution, through both experimental and theoretical work....
.

The field of bacteriology (later a subdiscipline of microbiology) is generally considered to have been founded by Ferdinand Cohn
Ferdinand Cohn

Ferdinand Julius Cohn was a Germany biologist.Cohn was born in Wroclaw in the Kingdom of Prussia Province of Silesia. At the age of 10 he suffered hearing impairment....
 (1828–1898), a botanist whose studies on algae
Algae

Algae are a large and diverse group of simple, typically autotrophic organisms, ranging from unicellular to multicellular forms. The largest and most complex marine forms are called seaweeds....
 and photosynthetic bacteria
Phototroph

Photoautotrophs or Phototroph are organisms that carry out photosynthesis to acquire energy. Energy from light, carbon dioxide and water are converted into organic materials to be used in cell functions such as biosynthesis and Cellular respiration....
 led him to describe several bacteria including Bacillus
Bacillus

Bacillus is a genus of rod-shaped bacterium and a member of the division Firmicutes. Bacillus species are either obligate or facultative aerobes, and test positive for the enzyme catalase....
 and Beggiatoa
Beggiatoa

Beggiatoa is a filamentous genus of proteobacteria, and are among the largest prokaryotes, with cells about 200 micrometres in diameter. Beggiatoa can be considered an indicator species since they are present and flourish in Marine environments which have been subject to pollution, where the bacteria become visible as a whitish laye...
. Cohn was also the first to formulate a scheme for the taxonomic classification of bacteria. Louis Pasteur
Louis Pasteur

Louis Pasteur was a France chemist and microbiologist best known for his remarkable breakthroughs in the causes and prevention of disease. His experiments supported the germ theory of disease, also reducing mortality from puerperal fever , and he created the first vaccine for rabies....
 (1822–1895) and Robert Koch
Robert Koch

Heinrich Hermann Robert Koch was a German physician. He became famous for isolating Bacillus anthracis , the Mycobacterium tuberculosis and the Vibrio cholerae and for his development of Koch's postulates....
 (1843–1910) were contemporaries of Cohn’s and are often considered to be the founders of medical microbiology
Medical microbiology

Medical microbiology is a branch of microbiology which deals with the study of microorganisms including bacteria, viruses, fungi and parasites which are of medical importance and are capable of causing diseases in human beings....
. Pasteur is most famous for his series of experiments designed to disprove the then widely held theory of spontaneous generation, thereby solidifying microbiology’s identity as a biological science. Pasteur also designed methods for food preservation (pasteurization
Pasteurization

Pasteurization is a process which slows microbial growth in foods. The process was named after its creator, France chemist and microbiologist Louis Pasteur....
) and vaccines against several diseases such as anthrax
Anthrax

Anthrax is an Acute disease in humans and animals caused by the bacterium Bacillus anthracis, which is highly lethal in some forms. There are effective vaccines against anthrax, and some forms of the disease respond well to antibiotic treatment....
, fowl cholera and rabies
Rabies

Rabies is a virus zoonotic neurotropic virus disease that causes acute encephalitis in mammals. It is most commonly caused by a bite from an infected animal, but occasionally by other forms of contact....
. Koch is best known for his contributions to the germ theory of disease
Germ theory of disease

The germ theory, also called the pathogenic theory of medicine, is a theory that proposes that microorganisms are the cause of many diseases....
, proving that specific diseases were caused by specific pathogenic microorganisms. He developed a series of criteria that have become known as the Koch's postulates
Koch's postulates

Koch's postulates are four criteria designed to establish a causal relationship between a causative microbe and a disease. The postulates were formulated by Robert Koch and Friedrich Loeffler in 1884 and refined and published by Koch in 1890....
. Koch was one of the first scientists to focus on the isolation of bacteria in pure culture resulting in his description of several novel bacteria including Mycobacterium tuberculosis
Mycobacterium tuberculosis

Mycobacterium tuberculosis is a pathogenic bacterial species in the genus Mycobacterium and the causative agent of most cases of tuberculosis....
, the causative agent of tuberculosis
Tuberculosis

Tuberculosis is a common and often deadly infectious disease caused by mycobacterium, mainly Mycobacterium tuberculosis . Tuberculosis usually attacks the lungs but can also affect the central nervous system, the lymphatic system, the circulatory system, the genitourinary system, the gastrointestinal system, bones, joints, and even the...
.

While Pasteur and Koch are often considered the founders of microbiology, their work did not accurately reflect the true diversity of the microbial world because of their exclusive focus on microorganisms having direct medical relevance. It was not until the work of Martinus Beijerinck
Martinus Beijerinck

Martinus Willem Beijerinck was a Netherlands microbiologist and botanist. He was born in Amsterdam.Beijerinck studied at Leiden University and became a teacher in microbiology at the Agricultural School in Wageningen ...
 (1851–1931) and Sergei Winogradsky
Sergei Winogradsky

Sergei Nikolaievich Winogradsky was a Russian microbiologist, ecologist and soil science who pioneered the Biogeochemical cycle concept and discovered the biological process of nitrification, the first known form of chemoautotrophy....
 (1856–1953), the founders of general microbiology (an older term encompassing aspects of microbial physiology, diversity and ecology), that the true breadth of microbiology was revealed. Beijerinck made two major contributions to microbiology: the discovery of virus
Virus

A virus is a Optical microscope#Limitations of light microscopes infectious agent that is unable to grow or reproduce outside a host cell . Viruses infect all cellular life....
es and the development of enrichment culture
Enrichment culture

An enrichment culture is a Growth medium with specific and known qualities that favors the growth of a particular microorganism. The enrichment culture's environment will support the growth of a selected microorganism, while inhibiting the growth of others....
 techniques. While his work on the Tobacco Mosaic Virus
Tobacco mosaic virus

Tobacco mosaic virus is an RNA virus that infects plants, especially tobacco and other members of the family Solanaceae. The infection causes characteristic patterns on the Leaf ....
 established the basic principles of virology, it was his development of enrichment culturing that had the most immediate impact on microbiology by allowing for the cultivation of a wide range of microbes with wildly different physiologies. Winogradsky was the first to develop the concept of chemolithotrophy and to thereby reveal the essential role played by microorganisms in geochemical processes. He was responsible for the first isolation and description of both nitrifying
Nitrifying bacteria

Nitrifying bacteria are chemotroph bacteria that grow at the expense of inorganic nitrogen compounds. Many species of nitrifying bacteria have complex internal membrane systems that are the location for key enzymes in nitrification: ammonia monooxygenase which oxidizes ammonia to hydroxylamine, and nitrite oxidoreductase, which oxidizes nitr...
 and nitrogen-fixing bacteria.

Types


The field of microbiology can be generally divided into several subdisciplines:

  • Microbial physiology: The study of how the microbial cell functions biochemically. Includes the study of microbial growth, microbial metabolism
    Metabolism

    Metabolism is the set of chemical reactions that occur in living organisms in order to maintain life. These processes allow organisms to grow and reproduce, maintain their structures, and respond to their environments....
     and microbial cell structure
    Bacterial cell structure

    Bacteria, despite their simplicity, contain a well developed cell structure which is responsible for many of their unique biological properties. Many structural features are unique to bacteria and are not found among archaea or eukaryotes....
    .
  • Microbial genetics
    Microbial genetics

    Microbial Genetics is a subject area within biotechnology and genetic engineering. It studies the genetics of microorganism. This involves the study of the genotype of microbial species and also the gene expression#expression system in the form of phenotypes....
    : The study of how gene
    Gene

    A gene is the basic unit of heredity in a living organism. All living things depend on genes. Genes hold the information to build and maintain their cell and pass genetic trait to offspring....
    s are organised and regulated in microbes in relation to their cellular functions. Closely related to the field of molecular biology
    Molecular biology

    Molecular biology is the study of biology at a molecule level. The field overlaps with other areas of biology and chemistry, particularly genetics and biochemistry....
    .
  • Cellular microbiology
    Cellular microbiology

    Cellular microbiology is a subfield of biology. It is a discipline that bridges microbiology and cell biology.The term "cellular microbiology" was coined in 1996 in a Science article....
    : A discipline bridging microbiology and cell biology
    Cell biology

    Cell biology is an list of academic disciplines that studies cell s ? their physiology properties, their structure, the organelles they contain, interactions with their environment, their cell cycle, cell division and apoptosis....
    .
  • Medical microbiology
    Medical microbiology

    Medical microbiology is a branch of microbiology which deals with the study of microorganisms including bacteria, viruses, fungi and parasites which are of medical importance and are capable of causing diseases in human beings....
    : The study of the pathogenic microbes
    Pathogenic microbes

    Pathogenic microbes are microbes that cause infectious diseases. This article is dedicated to human pathogenic microbes.The organisms involved include pathogenic bacteria, causing diseases such as bubonic plague, tuberculosis and anthrax; protozoa, causing diseases such as malaria, sleeping sickness and toxoplasmosis; and also fungi causing...
     and the role of microbes in human illness. Includes the study of microbial pathogenesis
    Pathogenesis

    The term pathogenesis means step by step development of a disease and the chain of events leading to that disease due to a series of changes in the structure and /or function of a cell/tissue/organ being caused by a microbial , chemical or physical agent....
     and epidemiology
    Epidemiology

    Epidemiology is the study of factors affecting the health and illness of populations, and serves as the foundation and logic of interventions made in the interest of public health and preventive medicine....
     and is related to the study of disease pathology
    Pathology

    Pathology is the study and diagnosis of disease through examination of Organ , tissue , bodily fluids and whole bodies . The term also encompasses the related science study of disease processes, called General pathology....
     and immunology
    Immunology

    Immunology is a broad branch of biomedical science science that covers the study of all aspects of the immune system in all organisms. It deals with, among other things, the physiology functioning of the immune system in states of both health and disease; malfunctions of the immune system in immunological disorders ; the physical, chemical an...
    .
  • Veterinary microbiology: The study of the role in microbes in veterinary medicine
    Veterinary medicine

    Veterinary medicine is that branch of medical science,which deals with the study of diagnosis,treatment and prevention of diseases in companion,domestic, exotic, wildlife and production animals....
     or animal taxonomy
    Taxonomy

    Taxonomy is the practice and science of classification. The word comes from the Greek language ', taxis and ', nomos .Taxonomies, or taxonomic schemes, are composed of taxonomic units known as taxa , or kinds of things that are arranged frequently in a hierarchical structure....
    .
  • Environmental microbiology
    Environmental microbiology

    Environmental microbiology is the study of the composition and physiology of microbial communities in the Natural environment. The environment in this case means the soil, water, air and sediments covering the planet and can also include the animals and plants that inhabit these areas....
    : The study of the function and diversity of microbes in their natural environments. Includes the study of microbial ecology
    Microbial ecology

    Microbial ecology is the relationship of microorganisms with one another and with their environment. It concerns the three major domain of life ? Eukaryote, Archaea, and Bacteria ? as well as viruses....
    , microbially-mediated nutrient cycling, geomicrobiology
    Geomicrobiology

    Geomicrobiology is a subset of the scientific discipline microbiology. The field of geomicrobiology concerns the role of microbe and microbial processes in geological and geochemical processes....
    , microbial diversity and bioremediation
    Bioremediation

    Bioremediation can be defined as any process that uses microorganisms, fungi, phytoremediation or their enzymes to return the natural environment altered by contaminants to its original condition....
    . Characterisation of key bacterial habitats such as the rhizosphere
    Rhizosphere

    The word rhizosphere can refer to:* Rhizosphere , the zone that surrounds the roots of plants* The Rhizome Collective, the property belonging to an anarchist collective in Austin, Texas...
     and phyllosphere
    Phyllosphere

    The phyllosphere is a term used in microbiology to refer to leaf surfaces or total above-ground surfaces of a plant as a habitat for microorganisms....
    , soil
    Soil

    Soil is the naturally occurring, unconsolidated or loose covering on the Earth's surface. Soil is composed of particles of broken rock that have been altered by chemical and environmental processes including weathering and erosion....
     and groundwater
    Groundwater

    Groundwater is water located beneath the ground surface in soil porosity spaces and in the fractures of lithologic formations. A unit of rock or an unconsolidated deposit is called an aquifer when it can yield a usable quantity of water....
     ecosystem
    Ecosystem

    An ecosystem is a natural unit consisting of all plants, animals and micro-organisms in an area functioning together with all of the non-living physical factors of the environment....
    s, open oceans or extreme environments (extremophile
    Extremophile

    An extremophile is an organism that thrives in and may even require physically or geochemically extreme environment that are detrimental to the majority of life on Earth....
    s).
  • Evolutionary microbiology: The study of the evolution of microbes. Includes the study of bacterial systematics
    Systematics

    Biological systematics is the study of the diversification of life on the planet Earth, both past and present, and the relationships among living things through time....
     and taxonomy
    Taxonomy

    Taxonomy is the practice and science of classification. The word comes from the Greek language ', taxis and ', nomos .Taxonomies, or taxonomic schemes, are composed of taxonomic units known as taxa , or kinds of things that are arranged frequently in a hierarchical structure....
    .
  • Industrial microbiology
    Industrial microbiology

    Industrial microbiology or microbial biotechnology encompasses the use of microorganisms in the manufacture of food or industrial products. The use of microorganisms for the production of food, either human or animal, is often considered a branch of food microbiology....
    : The exploitation of microbes for use in industrial processes. Examples include industrial fermentation
    Industrial fermentation

    Fermentation has many important uses in industry. Though the word fermentation can have stricter definitions, when speaking of it in industrial fermentation it more loosely refers to the breakdown of organic substances and re-assembly into other substances....
     and wastewater treatment
    Wastewater Treatment

    Wastewater treatment may refer to:* Sewage treatment* Industrial wastewater treatment...
    . Closely linked to the biotechnology
    Biotechnology

    Biotechnology is technology based on biology, especially when used in agriculture, food science, and medicine. United Nations Convention on Biological Diversity defines biotechnology as:...
     industry. This field also includes brewing
    Brewing

    Brewing is the production of alcoholic beverages and alcohol fuel through fermentation . The term is used for the production of beer, although the word "brewing" is also used to describe the fermentation process used to create wine and mead....
    , an important application of microbiology.
  • Aeromicrobiology: The study of airborne microorganisms.
  • Food microbiology
    Food microbiology

    Food microbiology is the study of the microorganisms which inhabit, create or contaminate food. Of major importance is the study of microorganisms causing food spoilage....
    : The study of microorganisms causing food spoilage and foodborne illness. Using microorganisms to produce foods, for example by fermentation.
  • Pharmaceutical microbiology
    Pharmaceutical microbiology

    Pharmaceutical microbiology is the part of industrial microbiology that is responsible for creating medications. All parenteral drugs, including many oral drugs, must go through rigorous microbiological testing in order to validate certain compounds by United States Pharmacopeia regulations....
    : the study of microorganisms causing pharmaceutical contamination and spoilage.
  • Oral microbiology
    Oral microbiology

    Oral microbiology is the study of the microorganisms of the oral cavity and the interactions between the oral microorganisms with each other and with the host....
    : the study of microorganisms of the mouth in particular those causing caries
    Caries

    Caries is a progressive destruction of any kind of bone structure, including the skull, ribs and other bones, or the tooth. Caries can be caused by osteomyelitis, which is a bacterial disease....
     and periodontal disease
    Periodontal disease

    Periodontitis refers to a number of inflammatory diseases affecting the periodontium ? that is, the tissues that surround and support the tooth....
    .


Benefits


Samadams2


Whilst there are undoubtedly some who fear all microbes due to the association of some microbes with many human illnesses, many microbes are also responsible for many beneficial processes such as industrial fermentation
Industrial fermentation

Fermentation has many important uses in industry. Though the word fermentation can have stricter definitions, when speaking of it in industrial fermentation it more loosely refers to the breakdown of organic substances and re-assembly into other substances....
 (e.g. the production of alcohol
Alcohol

In chemistry, an alcohol is any organic compound in which a hydroxyl Functional group is bound to a carbon atom of an alkyl or substituted alkyl group....
 and dairy products), antibiotic
Antibiotic

In common usage, an antibiotic is a substance or compound that kills or inhibits the growth of bacteria. Antibiotics belong to the group of antimicrobial compounds used to treat infections caused by microorganisms, including fungus and protozoa....
 production and as vehicles for cloning
Cloning

Cloning in biology is the process of producing populations of genetically-identical individuals that occurs in nature when organisms such as bacteria, insects or plants reproduce Asexual Reproduction....
 in higher organisms such as plants. Scientists have also exploited their knowledge of microbes to produce biotechnologically important enzyme
Enzyme

Enzymes are biomolecules that catalysis chemical reactions. Almost all enzymes are proteins. In enzymatic reactions, the molecules at the beginning of the process are called Substrate , and the enzyme converts them into different molecules, the products....
s such as Taq polymerase
Taq polymerase

Taq polymerase is a thermostable DNA polymerase named after the thermophilic bacterium Thermus aquaticus from which it was originally isolated by Thomas D....
, reporter gene
Reporter gene

In molecular biology, a reporter gene is a gene that researchers attach to another gene of interest in cell culture, animals or plants. Certain genes are chosen as reporters because the characteristics they confer on organisms expressing them are easily identified and measured, or because they are selectable markers....
s for use in other genetic systems and novel molecular biology techniques such as the yeast two-hybrid system
Two-hybrid screening

Two-hybrid screening is a molecular biology technique used to discover protein-protein interactions and protein-DNA interactions by testing for physical interactions between two proteins or a single protein and a DNA molecule, respectively....
.

Bacteria can be used for the industrial production of amino acid
Amino acid

In chemistry, an amino acid is a molecule containing both amine and carboxyl functional groups. These molecules are particularly important in biochemistry, where this term refers to alpha-amino acids with the general formula H2NCHRCOOH, where R is an organic substituent....
s. Corynebacterium glutamicum is one of the most important bacterial species with an annual production of more than two million tons of amino acids, mainly L-glutamate and L-lysine.

A variety of biopolymer
Biopolymer

Biopolymers are a class of polymers produced by living organisms.Starch, proteins and peptides,and DNA and RNA are all examples of biopolymers, in which the monomeric units, respectively, are sugars, amino acids, and nucleotides....
s, such as polysaccharide
Polysaccharide

Polysaccharides are relatively complex carbohydrates. They are polymers made up of many monosaccharides joined together by glycosidic bonds. They are therefore very large, often branched, macromolecules....
s, polyester
Polyester

Polyester is a category of polymers which contain the ester functional group in their main chain. Although there are many polyesters, the term "polyester" as a specific material most commonly refers to polyethylene terephthalate ....
s, and polyamide
Polyamide

A polyamide is a polymer containing monomers of amides joined by peptide bonds. They can occur both naturally, examples being proteins, such as wool and silk, and can be made artificially, examples being nylons, aramids, and sodium poly....
s, are produced by microorganisms. Microorganisms are used for the biotechnological production of biopolymers with tailored properties suitable for high-value medical application such as tissue engineering and drug delivery. Microorganisms are used for the biosynthesis of xanthan, alginate, cellulose
Cellulose

File:Cellulose Sessel.svgCellulose is an organic compound with the chemical formula , a polysaccharide consisting of a linear chain of several hundred to over ten thousand ? linked D-glucose units....
, cyanophycin
Cyanophycin

Cyanophycin, or multi-L-arginyl-poly , is a non-protein, non-ribosomally produced amino acid polymer composed of an aspartic acid backbone and arginine side groups....
, poly(gamma-glutamic acid), levan
Levan

Levan can refer to:* Levan polysaccharide A homopolysaccharide which is composed of D-fructofuranosyl* A group of fructans produced by bacteria or created by breaking down other kinds of plant fructans, called levan beta 2?6...
, hyaluronic acid, organic acids, oligosaccharide
Oligosaccharide

An oligosaccharide is a saccharide polymer containing a small number of component sugars, also known as simple sugars. The name derived from the Greek oligos, meaning "a few"....
s and polysaccharide
Polysaccharide

Polysaccharides are relatively complex carbohydrates. They are polymers made up of many monosaccharides joined together by glycosidic bonds. They are therefore very large, often branched, macromolecules....
, and polyhydroxyalkanoates.

Microorganisms are beneficial for microbial biodegradation
Microbial biodegradation

Interest in the microbial biodegradation of pollutants has intensified in recent years as humanity strives to find sustainable ways to cleanup contaminated environments....
 or bioremediation
Bioremediation

Bioremediation can be defined as any process that uses microorganisms, fungi, phytoremediation or their enzymes to return the natural environment altered by contaminants to its original condition....
 of domestic, agricultural and industrial wastes and subsurface pollution
Pollution

Pollution is the introduction of contaminants into an environment that causes instability, disorder, harm or discomfort to the ecosystem i.e. physical systems or living organisms ....
 in soils, sediments and marine environments. The ability of each microorganism to degrade toxic waste
Toxic waste

Toxic waste is waste material that can cause death or injury to living creatures. It usually is the product of industry or commerce, but comes also from residential use, agriculture, the military, medical facilities, radioactive sources, and light industry, such as dry cleaning establishments....
 depends on the nature of each contaminant. Since most sites are typically comprised of multiple pollutant types, the most effective approach to microbial biodegradation
Microbial biodegradation

Interest in the microbial biodegradation of pollutants has intensified in recent years as humanity strives to find sustainable ways to cleanup contaminated environments....
 is to use a mixture of bacterial species and strains, each specific to the biodegradation
Biodegradation

Biodegradation is the process by which organic compound substances are decomposition by the enzymes produced by living organisms. The term is often used in relation to ecology, waste management and natural environmental environmental remediation ....
 of one or more types of contaminants.

There are also various claims concerning the contributions to human and animal health by consuming probiotics (bacteria potentially beneficial to the digestive system) and/or prebiotics (substances consumed to promote the growth of probiotic microorganisms).

Recent research has suggested that microorganisms could be useful in the treatment of cancer
Cancer

Cancer is a class of diseases in which a group of cell display uncontrolled growth , invasion , and sometimes metastasis . These three malignant properties of cancers differentiate them from benign tumors, which are self-limited, do not invade or metastasize....
. Various strains of non-pathogenic clostridia
Clostridium

Clostridium is a genus of Gram-positive bacteria, belonging to the Firmicutes. They are obligate anaerobes capable of producing endospores....
 can infiltrate and replicate within solid tumors. Clostridial vectors can be safely administered and their potential to deliver therapeutic proteins has been demonstrated in a variety of preclinical models.




Further reading



See also


  • Archaea
    Archaea

    The Archaea are a group of single-celled microorganisms. A single individual or species from this domain is called an archaeon . Archaea, like bacteria, are prokaryotic....
  • Bacteria
    Bacteria

    The Bacteria are a large group of unicellular microorganisms. Typically a few micrometres in length, bacteria have a wide range of shapes, ranging from spheres to rods and spirals....
  • Biochemistry
    Biochemistry

    Biochemistry is the study of the chemistry processes in living organisms. It deals with the structure and function of cellular components such as proteins, carbohydrates, lipids, nucleic acids and other biomolecules....
  • Biomilling
  • Biosafety
    Biosafety

    Biosafety: prevention of large-scale loss of biological integrity, focusing both on ecology and human health.Biosafety is related to several fields...
  • Biotechnology
    Biotechnology

    Biotechnology is technology based on biology, especially when used in agriculture, food science, and medicine. United Nations Convention on Biological Diversity defines biotechnology as:...
  • Environmental microbiology
    Environmental microbiology

    Environmental microbiology is the study of the composition and physiology of microbial communities in the Natural environment. The environment in this case means the soil, water, air and sediments covering the planet and can also include the animals and plants that inhabit these areas....
  • Eukaryote
    Eukaryote

    Animals, plants, fungus, and protists are eukaryotes , organisms whose Cell are organized into complex structures enclosed within Cell membrane....


  • Food microbiology
    Food microbiology

    Food microbiology is the study of the microorganisms which inhabit, create or contaminate food. Of major importance is the study of microorganisms causing food spoilage....
  • Genetics
    Genetics

    Genetics , a discipline of biology, is the science of heredity and Genetic variation in living organisms. The fact that living things inherit traits from their parents has been used since prehistoric times to improve crop plants and animals through selective breeding....
  • Geomicrobiology
    Geomicrobiology

    Geomicrobiology is a subset of the scientific discipline microbiology. The field of geomicrobiology concerns the role of microbe and microbial processes in geological and geochemical processes....
  • Good Hygiene Practice
  • Good Microbiological Practice
  • Immunology
    Immunology

    Immunology is a broad branch of biomedical science science that covers the study of all aspects of the immune system in all organisms. It deals with, among other things, the physiology functioning of the immune system in states of both health and disease; malfunctions of the immune system in immunological disorders ; the physical, chemical an...
  • Important publications in microbiology
  • Industrial microbiology
    Industrial microbiology

    Industrial microbiology or microbial biotechnology encompasses the use of microorganisms in the manufacture of food or industrial products. The use of microorganisms for the production of food, either human or animal, is often considered a branch of food microbiology....


  • Medical technologist
    Medical technologist

    File:Lab tech.JPGA medical technologist is a healthcare professional who performs diagnostic analytic tests on body fluids such as blood, urine, sputum, feces, cerebrospinal fluid , peritoneal fluid, pericardial fluid, and synovial fluid, as well as other specimens....
  • Medicine
    Medicine

    Medicine is the art and science of healing. It encompasses a range of health care practices evolved to maintain and restore health by the prevention and treatment of illness....
  • Mycology
    Mycology

    Mycology is the branch of biology concerned with the study of fungus, including their genetics and biochemistry properties, their taxonomy, and ethnomycology as a source for tinder, medicine , food , entheogens, as well as their dangers, such as poisoning or infection....
  • Oral microbiology
    Oral microbiology

    Oral microbiology is the study of the microorganisms of the oral cavity and the interactions between the oral microorganisms with each other and with the host....
  • Bacteriophage meetings
    Phage meetings

    Bacteriophage are viruses of bacteria. They are likely Phage ecology#Vastness of phage ecology and contributed greatly to the development of the disciplines of History of molecular biology and molecular genetics....
  • Prokaryote
    Prokaryote

    The prokaryotes are a group of organisms that lack a cell nucleus , or any other cell membrane-bound organelles. They differ from the eukaryotes, which have a cell nucleus....
  • Virology
    Virology

    Virology is the study of virus : their structure, classification and evolution, their ways to infect and exploit cell for virus reproduction, the diseases they cause, the techniques to isolate and culture them, and their use in research and therapy....

External links


General


  • University of South Carolina


Journals


  • Critical Reviews in Microbiology ()
  • International Journal of Systematic and Evolutionary Microbiology
    International Journal of Systematic and Evolutionary Microbiology

    The International Journal of Systematic and Evolutionary Microbiology is a peer-reviewed academic journal in the field of microbiology systematics, first published in 1951....
  • Journal of Bacteriology
    Journal of Bacteriology

    The 'Journal of Bacteriology' is an academic journal published by the American Society for Microbiology. The title is commonly abbreviated J....
  • Nature Reviews Microbiology
    Nature Reviews Microbiology

    Launched in October 2003, Nature Reviews Microbiology [ISSN 1740-1526 EISSN 1740-1534] is part of the Nature Publishing Group. The journal publishes reviews and perspectives that help to integrate the various disciplines, bridging fundamental research and its clinical, industrial and environmental applications to create a single information r...
     ()
  • Springer Protocols
    Springer Protocols

    Springer Protocols, published by Springer Science+Business Media, is a database of life sciences protocol . These ?recipes? allow scientists to recreate experiments in their own laboratory....
     in Microbiology


Professional organizations