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Arginase

 

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Arginase



 
 
Arginase is a manganese
Manganese

Manganese is a chemical element, designated by the symbol Mn. It has the atomic number 25. It is found as a Oxidation state in nature , and in many minerals....
-containing enzyme
Enzyme

Enzymes are biomolecules that catalysis chemical reactions. Almost all enzymes are proteins. In enzymatic reactions, the molecules at the beginning of the process are called Substrate , and the enzyme converts them into different molecules, the products....
. The reaction catalyzed by this enzyme is: arginine
Arginine

Arginine is an a-amino acid. The Optical isomerism is one of the 20 most common natural amino acids. Its codons are CGU, CGC, CGA, CGG, AGA, and AGG....
 + H2O
Water

Water is a common chemical substance that is essential for the survival of all known forms of life. In typical usage, water refers only to its liquid form or States of matter, but the substance also has a solid state, ice, and a gaseous state, water vapor or steam....
 ? ornithine
Ornithine

Ornithine is an amino acid which plays a role in the urea cycle....
 + urea
Urea

Urea is an organic compound with the chemical formula 2carbonoxygen.Urea is also known by the International Nonproprietary Name carbamide, as established by the World Health Organization....
. It is the final enzyme
Enzyme

Enzymes are biomolecules that catalysis chemical reactions. Almost all enzymes are proteins. In enzymatic reactions, the molecules at the beginning of the process are called Substrate , and the enzyme converts them into different molecules, the products....
 of the urea cycle
Urea cycle

The urea cycle is a cycle of biochemistry reactions occurring in many animals that produces urea 2carbonoxygen from ammonia . This cycle was the first metabolic cycle discovered ....
.

rginase is the fifth and final step in the urea cycle
Urea cycle

The urea cycle is a cycle of biochemistry reactions occurring in many animals that produces urea 2carbonoxygen from ammonia . This cycle was the first metabolic cycle discovered ....
, a series of biophysical reactions in mammals during which the body disposes of harmful ammonia
Ammonia

Ammonia is a chemical compound with the chemical formula nitrogenhydrogen. It is normally encountered as a gas with a characteristic pungent odor....
. Specifically, arginase converts L-arginine
Arginine

Arginine is an a-amino acid. The Optical isomerism is one of the 20 most common natural amino acids. Its codons are CGU, CGC, CGA, CGG, AGA, and AGG....
 into L-ornithine
Ornithine

Ornithine is an amino acid which plays a role in the urea cycle....
 and urea. In most mammals, two isozymes of this enzyme exist; the first, Arginase I, functions in the urea cycle, and is located primarily in the cytoplasm of the liver.






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Encyclopedia


Arginase is a manganese
Manganese

Manganese is a chemical element, designated by the symbol Mn. It has the atomic number 25. It is found as a Oxidation state in nature , and in many minerals....
-containing enzyme
Enzyme

Enzymes are biomolecules that catalysis chemical reactions. Almost all enzymes are proteins. In enzymatic reactions, the molecules at the beginning of the process are called Substrate , and the enzyme converts them into different molecules, the products....
. The reaction catalyzed by this enzyme is: arginine
Arginine

Arginine is an a-amino acid. The Optical isomerism is one of the 20 most common natural amino acids. Its codons are CGU, CGC, CGA, CGG, AGA, and AGG....
 + H2O
Water

Water is a common chemical substance that is essential for the survival of all known forms of life. In typical usage, water refers only to its liquid form or States of matter, but the substance also has a solid state, ice, and a gaseous state, water vapor or steam....
 ? ornithine
Ornithine

Ornithine is an amino acid which plays a role in the urea cycle....
 + urea
Urea

Urea is an organic compound with the chemical formula 2carbonoxygen.Urea is also known by the International Nonproprietary Name carbamide, as established by the World Health Organization....
. It is the final enzyme
Enzyme

Enzymes are biomolecules that catalysis chemical reactions. Almost all enzymes are proteins. In enzymatic reactions, the molecules at the beginning of the process are called Substrate , and the enzyme converts them into different molecules, the products....
 of the urea cycle
Urea cycle

The urea cycle is a cycle of biochemistry reactions occurring in many animals that produces urea 2carbonoxygen from ammonia . This cycle was the first metabolic cycle discovered ....
.

Structure and Function of Arginase

Arginase is the fifth and final step in the urea cycle
Urea cycle

The urea cycle is a cycle of biochemistry reactions occurring in many animals that produces urea 2carbonoxygen from ammonia . This cycle was the first metabolic cycle discovered ....
, a series of biophysical reactions in mammals during which the body disposes of harmful ammonia
Ammonia

Ammonia is a chemical compound with the chemical formula nitrogenhydrogen. It is normally encountered as a gas with a characteristic pungent odor....
. Specifically, arginase converts L-arginine
Arginine

Arginine is an a-amino acid. The Optical isomerism is one of the 20 most common natural amino acids. Its codons are CGU, CGC, CGA, CGG, AGA, and AGG....
 into L-ornithine
Ornithine

Ornithine is an amino acid which plays a role in the urea cycle....
 and urea. In most mammals, two isozymes of this enzyme exist; the first, Arginase I, functions in the urea cycle, and is located primarily in the cytoplasm of the liver. The second isozyme, Arginase II, has been implicated in the regulation of the arginine/ornithine concentrations in the cell. It is located in mitochondria of several tissues in the body, with most abundance in the kidney and prostate. It may be found at lower levels in macrophages, lactating mammary glands, and brain. The second isozyme may be found in the absence of other urea cycle enzymes. Arginase consists of three tetramers. The enzyme requires a two-molecule metal cluster of manganese in order to maintain proper function. These Mn2+ ions coordinate with water, orientating and stabilizing the molecule and allowing water to act as a nucleophile
Nucleophile

In chemistry, a nucleophile is a reagent that forms a chemical bond to its reaction partner by donating both bonding electrons. Because nucleophiles donate electrons, they are by definition Lewis bases ....
 and attack L-arginine, hydrolyzing it into ornithene and urea.

Mechanism

The active site holds L-arginine in place via hydrogen bonding between the guanidinium group with Glu227. This bonding orients L-arginine for nucleophillic attack by the metal-associated hydroxide ion at the guanidinium group. This results in a tetrahedral intermediate. The manganese ions act to stabilize both the hydroxyl group in the tetrahedral intermediate, as well as the developing sp3 lone electron pair on the NH2 group as the tetrahedral intermediate is formed.

Arginase's active site is extraordinarily specific. Modifying the substrate structure and/or stereochemistry severely lowers the kinetic activity of the enzyme. This specificity occurs due to the high number of hydrogen bonds between substrate and enzyme; direct or water-facilitated hydrogen bonds exist, saturating both the four acceptor positions on the alpha carboxylate group and all three positions on the alpha amino group. N-hyroxy-L-arginine (NOHA), an intermediate of NO biosynthesis, is a moderate inhibitor of arginase. Crystal structure of its complex with the enzyme reveals that it displaces the metal-bridging hydroxide ion and bridges the binuclear manganese cluster.

Additionally, 2(S)-aminio=6-boronohexonic acid (ABH) is an L-arginine analogue that also creates a tetrahedral intermediate similar to that formed in the catalysis of the natural substrate, and is a potent inhibitor of human arginase I.

Role in Sexual Response

Arginase II is coexpressed with nitric oxide (NO) synthase
Nitric oxide synthase

Nitric oxide synthases are present among eukaryotic enzymes as dimeric, calmodulin-dependent or calmodulin-containing cytochrome p450-like hemoprotein that combine reductase and oxygenase catalytic domains in one dimer, bear both flavin adenine dinucleotide and flavin mononucleotide , and carry out a 5`-electron oxidation of non-aromatic a...
 in smooth muscle tissue, such as the muscle in the genitals of both men and women. The contraction and relaxation of these muscles has been attributed to NO synthase, which causes rapid relaxation of smooth muscle tissue and facilitates engorgement of tissue necessary for normal sexual response. However, since NO synthase and arginase compete for the same substrate (L-arginine), over-expressed arginase can affect NO synthase activity and NO-dependent smooth muscle relaxation by depleting the substrate pool of L-arginine that would otherwise be available to NO synthase. In contrast, inhibiting arginase with ABH or other boronic acid inhibitors will maintain normal cellular levels of arginine, thus allowing for normal muscle relaxation and sexual response.

Recent studies have implicated arginase as a controlling factor in both male erectile function and female sexual arousal, and is therefore a potential target for treatment of sexual dysfunction in both sexes. Additionally, supplementing the diet with additional L-arginine will decrease the amount of competition between arginase and NO synthase by providing extra substrate for each enzyme.

Pathology

Arginase deficiency
Deficiency

A deficiency is a lack of something... Example : there is a deficiency of oxygen in the air.*In mathematics, a deficient number is a number n for which s < 2n....
 typically refers to decreased function of arginase I, the liver isoform of arginase. This deficiency is commonly referred to as hyperargininemia or arginemia. The disorder is hereditary and autosomal recessive. It is characterized by lowered activity of arginase in hepatic cells. Additionally, the disorder is considered to be the rarest of the heritable defects in ureagenesis. Unlike other urea cycle disorders, ureagenesis still persists in subjects with arginase deficiency. A proposed reason for the continuation of arginase function is suggested by increased activity of arginase II in the kidneys of subjects with arginase I deficiency. Researchers believe that buildup of arginase triggers increased expression of arginase II. The enzymes in the kidney will then partially catalyze ureagenesis, compensating somewhat for a decrease in arginase I activity in the liver. Due to this alternate method of removing excess arginine
Arginine

Arginine is an a-amino acid. The Optical isomerism is one of the 20 most common natural amino acids. Its codons are CGU, CGC, CGA, CGG, AGA, and AGG....
 and ammonia from the bloodstream, subjects with arginase deficiency tend to have longer lifespans than those who have other urea cycle defects.

Symptoms of the disorder
Disorder

Disorder may refer to :* Disorder * Chaos, unpredictability and in the metaphysical sense, it is the opposite of law and order* Entropy, a state function of a thermodynamic system...
 include neurological impairment, dementia
Dementia

Dementia is the progressive decline in cognition due to damage or disease in the body beyond what might be expected from normal aging. Although dementia is far more common in the geriatric population, it may occur in any stage of adulthood....
, retardation of growth, and hyperammonemia. While some symptoms of the disease can be controlled via dietary restrictions and pharmaceutical developments, no cure or completely effective therapy currently exists.

External links

  • in PROSITE
    PROSITE

    PROSITE is a database of protein families and protein domains. It consists of entries describing the domains, Protein family and functional sites as well as amino acid patterns, signatures, and profiles in them....