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Peptidoglycan

 
Peptidoglycan

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Peptidoglycan



 
 
Not to be confused with glycoprotein
Glycoprotein

Not to be confused with peptidoglycan or proteoglycan.Glycoproteins are proteins that contain oligosaccharide chains covalently attached to their Peptide side-chains....
.


Peptidoglycan, also known as murein, is a polymer
Polymer

A polymer is a large molecule composed of repeating structural units typically connected by covalent chemical bonds. While polymer in popular usage suggests plastic, the term actually refers to a large class of natural and synthetic materials with a variety of properties....
 consisting of sugars and amino acids that forms a mesh-like layer outside the plasma membrane of bacteria
Bacteria

The Bacteria are a large group of unicellular microorganisms. Typically a few micrometres in length, bacteria have a wide range of shapes, ranging from spheres to rods and spirals....
, forming the cell wall
Cell wall

A cell wall is a tough, flexible and sometimes fairly rigid layer that surrounds some types of cell . It is located outside the cell membrane and provides these cells with structural support and protection, and also acts as a filtering mechanism....
. The sugar component consists of alternating residues of ß-(1,4) linked N-acetylglucosamine
N-Acetylglucosamine

N-Acetylglucosamine is a monosaccharide derivative of glucose. Chemically it is an amide between glucosamine and acetic acid. It has a molecular formula of carbon8hydrogen15nitrogenoxygen6, a molar mass of 221.21 g/mol, and it is significant in several biological systems....
 and N-acetylmuramic acid
N-Acetylmuramic acid

N-Acetylmuramic acid, or MurNAc, is the ether of lactic acid and N-acetylglucosamine with a chemical formula of Carbon11Hydrogen19NitrogenOxygen8....
 residues. Attached to the N-acetylmuramic acid is a peptide chain of three to five amino acids.






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Not to be confused with glycoprotein
Glycoprotein

Not to be confused with peptidoglycan or proteoglycan.Glycoproteins are proteins that contain oligosaccharide chains covalently attached to their Peptide side-chains....
.


Peptidoglycan, also known as murein, is a polymer
Polymer

A polymer is a large molecule composed of repeating structural units typically connected by covalent chemical bonds. While polymer in popular usage suggests plastic, the term actually refers to a large class of natural and synthetic materials with a variety of properties....
 consisting of sugars and amino acids that forms a mesh-like layer outside the plasma membrane of bacteria
Bacteria

The Bacteria are a large group of unicellular microorganisms. Typically a few micrometres in length, bacteria have a wide range of shapes, ranging from spheres to rods and spirals....
, forming the cell wall
Cell wall

A cell wall is a tough, flexible and sometimes fairly rigid layer that surrounds some types of cell . It is located outside the cell membrane and provides these cells with structural support and protection, and also acts as a filtering mechanism....
. The sugar component consists of alternating residues of ß-(1,4) linked N-acetylglucosamine
N-Acetylglucosamine

N-Acetylglucosamine is a monosaccharide derivative of glucose. Chemically it is an amide between glucosamine and acetic acid. It has a molecular formula of carbon8hydrogen15nitrogenoxygen6, a molar mass of 221.21 g/mol, and it is significant in several biological systems....
 and N-acetylmuramic acid
N-Acetylmuramic acid

N-Acetylmuramic acid, or MurNAc, is the ether of lactic acid and N-acetylglucosamine with a chemical formula of Carbon11Hydrogen19NitrogenOxygen8....
 residues. Attached to the N-acetylmuramic acid is a peptide chain of three to five amino acids. The peptide chain can be cross-linked to the peptide chain of another strand forming the 3D mesh-like layer. Some Archaea
Archaea

The Archaea are a group of single-celled microorganisms. A single individual or species from this domain is called an archaeon . Archaea, like bacteria, are prokaryotic....
 have a similar layer of pseudopeptidoglycan
Pseudopeptidoglycan

Pseudopeptidoglycan is a major cell wall component of some archaea that differs from bacterial peptidoglycan in chemical structure, but resembles eubacteria peptidoglycan in morphology, function, and structure....
. Peptidoglycan serves a structural role in the bacterial cell wall, giving structural strength, as well as counteracting the osmotic pressure of the cytoplasm
Cytoplasm

The cytoplasm is the part of a Cell that is enclosed within the plasma membrane. In eukaryote cells the cytoplasm contains organelles, such as mitochondrion, that are filled with liquid kept separate from the rest of the cytoplasm by biological membranes....
. A common misconception is that peptidoglycan gives the cell its shape; however, whereas peptidoglycan helps maintain the structure of the cell, it is actually the MreB
MreB

MreB is a protein found in bacteria that has been identified as a homology of actin, as indicated by similarities in tertiary structure and conservation of active site amino acid sequence....
 protein that facilitates cell shape. Peptidoglycan is also involved in binary fission
Binary fission

Binary fission is the form of asexual reproduction and cell division used by prokaryotic and some eukaryotic organisms . This process results in the reproduction of a living prokaryotic cell by division into two parts which each have the potential to grow to the size of the original cell....
 during bacterial cell reproduction.

The peptidoglycan layer is substantially thicker in Gram-positive
Gram-positive

Gram-positive Bacteria are those that are stained dark blue or violet by Gram staining. This is in contrast to Gram-negative bacteria, which cannot retain the crystal violet stain, instead taking up the counterstain and appearing red or pink....
 bacteria
Bacteria

The Bacteria are a large group of unicellular microorganisms. Typically a few micrometres in length, bacteria have a wide range of shapes, ranging from spheres to rods and spirals....
 (20 to 80 nanometers) than in Gram-negative
Gram-negative

Gram-negative bacteria are those bacteria that do not retain crystal violet dye in the Gram staining protocol. In a Gram stain test, a counterstain is added after the crystal violet, coloring all Gram-negative bacteria with a red or pink color....
 bacteria (7 to 8 nanometers), with the attachment of the S-layer
S-layer

An S-layer is a part of the cell envelope commonly found in bacteria, as well as among archaea. It consists of a monomolecular layer composed of identical proteins or glycoproteins....
. Peptidoglycan forms around 90% of the dry weight
Dry weight

Dry weight may refer to:*Dry weight , the weight of a motorcycle without fluids*Dry weight , the weight of a vehicle without fluids*The weight of a spacecraft or launch vehicle without propellants and pressurizing gases...
 of Gram-positive bacteria but only 10% of Gram-negative strains. In Gram-positive strains, it is important in attachment roles and stereotyping purposes. For both Gram-positive and Gram-negative bacteria, particles of approximately 2 nm can pass through the peptidoglycan.

Function

The main purpose of peptidoglycan is to maintain bacterial shape and to counteract the internal pressure of the bacterial cell, which is approximately 3 to 5 atm in Gram-negative bacteria and up to 25 atm in Gram-positive bacteria. This is reflected by the thickness of the peptidoglycan sacculus. The sacculus is mainly single layered in Gram-negatives while Gram-positives have up to 40 layers of peptidoglycan.

Peptidoglycan also serves as an anchor for proteins. In Gram-negatives the only protein known to be covalently attached to the peptidoglycan is Braun's lipoprotein
Braun's lipoprotein

Braun's lipoprotein , found in gram-negative cell walls, is one of the most abundant membrane proteins; its molecular weight is about 7.2 kDa. It is bound at its C-terminal end by a covalent bond to the peptidoglycan layer and is embedded in the outer membrane by its hydrophobic head ....
, which links the sacculus to the outer membrane. Approximately one third of the lipoprotein
Lipoprotein

A lipoprotein is a biochemistry assembly that contains both proteins and lipids. The lipids or their derivatives may be covalently or non-covalently bound to the proteins....
 is covalently bound to the a-carboxyl-group of meso-diaminopimelic acid (m-A2pm) of the stem peptide by the e-amino group of the Lys at the lipoprotein C-terminus. The other two thirds are freely associated with the outer membrane.

In Gram-positive bacteria, proteins, capsular polysaccharide
Polysaccharide

Polysaccharides are relatively complex carbohydrates. They are polymers made up of many monosaccharides joined together by glycosidic bonds. They are therefore very large, often branched, macromolecules....
s and teichoic acid
Teichoic acid

Teichoic acids are polysaccharides of glycerol phosphate or ribitol phospate linked via phosphodiester bonds....
s are covalently and non-covalently associated with peptidoglycan. These molecules are responsible for bacteria-host interactions and virulence. The covalent attachment of proteins is mediated by sortases, which recognize a specific cell wall sorting signal (CWS) located in the C-terminus of the attached protein. S. aureus contains two different sortases which anchor proteins to peptidoglycan. The anchored proteins are responsible for the manifestation of infections. In some Gram-positive bacteria sortases polymerise fimbriae and pili and anchor them to the murein sacculus.

Antibiotic inhibition


Some antibacterial drugs such as penicillin
Penicillin

Penicillin is a group of antibiotics derived from Penicillium fungi. They are Beta-lactam antibiotics used in the treatment of bacterial infections caused by susceptible, usually Gram-positive, organisms....
 interfere with the production of peptidoglycan by binding to bacterial enzymes known as penicillin-binding proteins or transpeptidase
Transpeptidase

A transpeptidase is a bacterial enzyme that cross-links the peptidoglycan chains to form rigid cell walls. This enzyme is also known by several other names including DD-peptidase, DD-transpeptidase, D-alanyl-D-alanine carboxypeptidase and serine-type D-Ala-D-Ala carboxypeptidase....
s. Penicillin-binding proteins form the bonds between oligopeptide crosslinks in peptidoglycan. For a bacterial cell to reproduce through binary fission
Binary fission

Binary fission is the form of asexual reproduction and cell division used by prokaryotic and some eukaryotic organisms . This process results in the reproduction of a living prokaryotic cell by division into two parts which each have the potential to grow to the size of the original cell....
, more than a million peptidoglycan subunits (NAM-NAG+oligopeptide) must be attached to existing subunits. Mutations in transpeptidases that lead to reduced interactions with an antibiotic are a significant source of emerging antibiotic resistance
Antibiotic resistance

Antibiotic resistance is the ability of a microorganism to withstand the effects of antibiotics. It is a specific type of drug resistance. Antibiotic resistance evolves via natural selection acting upon random mutation, but it can also be engineered by applying an evolutionary stress on a population....
.

Considered the human body's own antibiotic
Antibiotic

In common usage, an antibiotic is a substance or compound that kills or inhibits the growth of bacteria. Antibiotics belong to the group of antimicrobial compounds used to treat infections caused by microorganisms, including fungus and protozoa....
, lysozyme
Lysozyme

Lysozymes, also known as muramidase or N-acetylmuramide glycanhydrolase, are a family of enzymes which damage bacterial cell walls by catalyzing hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins....
s found in tears work by breaking the ß-(1,4)-glycosidic bonds in peptidoglycan (see below) and thereby destroying many bacterial cells. Antibiotics such as penicillin commonly target bacterial cell wall formation (of which peptidoglycan is an important component) because animal cells do not have cell walls.

Structure

The peptidoglycan layer in the bacterial cell wall is a crystal lattice structure formed from linear chains of two alternating amino sugar
Sugar

Sugar is a class of edible crystalline substances, mainly sucrose, lactose, and fructose. Human taste buds interpret its flavor as sweet. Sugar as a basic food carbohydrate primarily comes from sugar cane and from sugar beet, but also appears in fruit, honey, sorghum, sugar maple , and in many other sources....
s, namely N-acetylglucosamine
N-Acetylglucosamine

N-Acetylglucosamine is a monosaccharide derivative of glucose. Chemically it is an amide between glucosamine and acetic acid. It has a molecular formula of carbon8hydrogen15nitrogenoxygen6, a molar mass of 221.21 g/mol, and it is significant in several biological systems....
 (GlcNAc or NAG) and N-acetylmuramic acid
N-Acetylmuramic acid

N-Acetylmuramic acid, or MurNAc, is the ether of lactic acid and N-acetylglucosamine with a chemical formula of Carbon11Hydrogen19NitrogenOxygen8....
 (MurNAc or NAM). The alternating sugars are connected by a ß-(1,4)-glycosidic bond
Glycosidic bond

In chemistry, a glycosidic bond is a certain type of functional group that joins a carbohydrate molecule to another, which may be another carbohydrate....
. Each MurNAc is attached to a short (4- to 5-residue) amino acid
Amino acid

In chemistry, an amino acid is a molecule containing both amine and carboxyl functional groups. These molecules are particularly important in biochemistry, where this term refers to alpha-amino acids with the general formula H2NCHRCOOH, where R is an organic substituent....
 chain, containing D-alanine, D-glutamic acid, and meso-diaminopimelic acid in the case of Escherichia coli
Escherichia coli

'Escherichia coli' , is a Gram negative bacterium that is commonly found in the lower gastrointestinal tract of warm-blooded animals. Most E....
 (a Gram negative) or L-alanine, D-glutamine, L-lysine, and D-alanine in the case of Staphylococcus aureus
Staphylococcus aureus

Staphylococcus aureus is the most common cause of staph infections. It is a spherical Bacteria, frequently found in the nose and skin of a person....
 (a Gram positive). These amino acids, except the L-amino acids, do not occur in proteins and are thought to help protect against attacks by most peptidases. Cross-link
Cross-link

Cross-links are bonds that link one polymer chain to another. They can be covalent bonds or ionic bonds. "Polymer chains" can refer to synthetic polymers or natural polymers ....
ing between amino acid
Amino acid

In chemistry, an amino acid is a molecule containing both amine and carboxyl functional groups. These molecules are particularly important in biochemistry, where this term refers to alpha-amino acids with the general formula H2NCHRCOOH, where R is an organic substituent....
s in different linear amino sugar chains by an enzyme known as transpeptidase
Transpeptidase

A transpeptidase is a bacterial enzyme that cross-links the peptidoglycan chains to form rigid cell walls. This enzyme is also known by several other names including DD-peptidase, DD-transpeptidase, D-alanyl-D-alanine carboxypeptidase and serine-type D-Ala-D-Ala carboxypeptidase....
 result in a 3-dimensional structure that is strong and rigid. The specific amino acid sequence and molecular structure vary with the bacterial species
Species

In biology, a species is one of the basic units of biological classification and a taxonomic rank. A species is often defined as a group of organisms capable of interbreeding and producing fertile offspring....
.

See also


  • Pseudopeptidoglycan
    Pseudopeptidoglycan

    Pseudopeptidoglycan is a major cell wall component of some archaea that differs from bacterial peptidoglycan in chemical structure, but resembles eubacteria peptidoglycan in morphology, function, and structure....


External links