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Methanogenesis



 
 
Methanogenesis or biomethanation is the formation of methane
Methane

Methane is a chemical compound with the molecular formula . It is the simplest alkane, and the principal component of natural gas. Methane's bond angles are 109.5 degrees....
 by microbes known as methanogen
Methanogen

Methanogens are archaea that produce methane as a metabolic byproduct in anoxic conditions. They are common in wetlands, where they are responsible for marsh gas, and in the guts of animals such as ruminants and humans, where they are responsible for the methane content of flatulence....
s. Organisms capable of producing methane have been identified only from the kingdom
Kingdom (biology)

In Biology taxonomy, kingdom or regnum is a taxonomic rank in either the highest rank, or the Rank below domain . Each kingdom is divided into smaller groups called Phylum ....
 Archaea
Archaea

The Archaea are a group of single-celled microorganisms. A single individual or species from this domain is called an archaeon . Archaea, like bacteria, are prokaryotic....
, a group phylogenetically
Phylogenetics

In biology, phylogenetics is the study of evolutionary relatedness among various groups of organisms , which is discovered through molecular sequencing data and morphological data matrices....
 distinct from both eukaryote
Eukaryote

Animals, plants, fungus, and protists are eukaryotes , organisms whose Cell are organized into complex structures enclosed within Cell membrane....
s and bacteria
Bacteria

The Bacteria are a large group of unicellular microorganisms. Typically a few micrometres in length, bacteria have a wide range of shapes, ranging from spheres to rods and spirals....
, although many live in close association with anaerobic bacteria. The production of methane is an important and widespread form of microbial metabolism
Metabolism

Metabolism is the set of chemical reactions that occur in living organisms in order to maintain life. These processes allow organisms to grow and reproduce, maintain their structures, and respond to their environments....
. In most environments, it is the final step in the decomposition of biomass
Biomass (ecology)

Biomass, in ecology, is the mass of living biological organisms in a given area or ecosystem at a given time. Biomass can refer to species biomass, which is the mass of one or more species, or to community biomass, which is the mass of all species in the community....
.

Recently, some experiments have suggested that leaf
Leaf

In botany, a leaf is an above-ground plant Organ specialized for photosynthesis. For this purpose, a leaf is typically flat and thin, to expose the cells containing chloroplast to light over a broad area, and to allow light to penetrate fully into the tissues....
 tissues of living plants emit methane .






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Encyclopedia


Methanogenesis or biomethanation is the formation of methane
Methane

Methane is a chemical compound with the molecular formula . It is the simplest alkane, and the principal component of natural gas. Methane's bond angles are 109.5 degrees....
 by microbes known as methanogen
Methanogen

Methanogens are archaea that produce methane as a metabolic byproduct in anoxic conditions. They are common in wetlands, where they are responsible for marsh gas, and in the guts of animals such as ruminants and humans, where they are responsible for the methane content of flatulence....
s. Organisms capable of producing methane have been identified only from the kingdom
Kingdom (biology)

In Biology taxonomy, kingdom or regnum is a taxonomic rank in either the highest rank, or the Rank below domain . Each kingdom is divided into smaller groups called Phylum ....
 Archaea
Archaea

The Archaea are a group of single-celled microorganisms. A single individual or species from this domain is called an archaeon . Archaea, like bacteria, are prokaryotic....
, a group phylogenetically
Phylogenetics

In biology, phylogenetics is the study of evolutionary relatedness among various groups of organisms , which is discovered through molecular sequencing data and morphological data matrices....
 distinct from both eukaryote
Eukaryote

Animals, plants, fungus, and protists are eukaryotes , organisms whose Cell are organized into complex structures enclosed within Cell membrane....
s and bacteria
Bacteria

The Bacteria are a large group of unicellular microorganisms. Typically a few micrometres in length, bacteria have a wide range of shapes, ranging from spheres to rods and spirals....
, although many live in close association with anaerobic bacteria. The production of methane is an important and widespread form of microbial metabolism
Metabolism

Metabolism is the set of chemical reactions that occur in living organisms in order to maintain life. These processes allow organisms to grow and reproduce, maintain their structures, and respond to their environments....
. In most environments, it is the final step in the decomposition of biomass
Biomass (ecology)

Biomass, in ecology, is the mass of living biological organisms in a given area or ecosystem at a given time. Biomass can refer to species biomass, which is the mass of one or more species, or to community biomass, which is the mass of all species in the community....
.

Recently, some experiments have suggested that leaf
Leaf

In botany, a leaf is an above-ground plant Organ specialized for photosynthesis. For this purpose, a leaf is typically flat and thin, to expose the cells containing chloroplast to light over a broad area, and to allow light to penetrate fully into the tissues....
 tissues of living plants emit methane . Other research has indicated that the plants are not actually generating methane; they are just absorbing methane from the soil and the emitting it through their leaf tissues . There may still be some unknown mechanism by which plants produce methane, but that is by no means certain.

Biochemistry of methanogenesis

Methanogenesis in microbes is a form of anaerobic respiration
Anaerobic respiration

Anaerobic respiration is the process of generating energy through cellular respiration , without the use of oxygen....
. Methanogens do not use oxygen to breathe; in fact, oxygen inhibits the growth of methanogens. The terminal electron acceptor in methanogenesis is not oxygen, but carbon. The carbon can occur in a small number of organic compounds, all with low molecular weights. The two best described pathways involve the use of carbon dioxide
Carbon dioxide

Carbon dioxide is a chemical compound composed of two oxygen atoms covalent bond to a single carbon atom. It is a gas at standard temperature and pressure and exists in Earth's atmosphere in this state....
 and acetic acid
Acetic acid

Acetic acid, CH3COOH, also known as ethanoic acid, is an organic acid which gives vinegar its sour taste and pungent smell. Pure, water-free acetic acid is a colourless liquid that absorbs water from the environment , and freezes at 16.7 Celsius to a colourless crystalline solid....
 as terminal electron acceptors:

CO2 + 4 H2 ? CH4 + 2H2O

CH3COOH ? CH4 + CO2

However, methanogenesis has been shown to use carbon from other small organic compounds, such as formic acid
Formic acid

Formic acid is the simplest carboxylic acid. Its formula is hydrogencarbonoxygenOH or CH2O2. It is an important intermediate in chemical synthesis and occurs naturally, most notably in the venom of bee and ant stingers....
 (formate), methanol
Methanol

Methanol, also known as methyl alcohol, carbinol, wood alcohol, wood naphtha or wood spirits, is a chemical compound with chemical formula carbonhydrogen3oxygenhydrogen ....
, methylamines, dimethyl sulfide
Dimethyl sulfide

Dimethyl sulfide or methylthiomethane is an Organosulfur compounds compound with the formula 2S. Dimethyl sulfide is a water-insoluble flammable liquid that boils at 37?C and has a characteristic disagreeable odor....
, and methanethiol
Methanethiol

Methanethiol is a colorless gas with a smell like rotten cabbage. It is a natural substance found in the blood, brain, and other animal as well as plant tissues....
.

The biochemistry of methanogenesis is relatively complex, involving the following coenzymes and cofactors: F430
F430

F430 is the prosthetic group of the enzyme methyl coenzyme M reductase. It is found only in methanogenic archaea. This enzyme catalyzes the release of methane in the final step of methanogenesis:...
, coenzyme B
Coenzyme B

Coenzyme B is a coenzyme required for redox reactions in methanogens. The full chemical name of coenzyme B is 7-mercaptoheptanoylthreoninephosphate....
, coenzyme M
Coenzyme M

Coenzyme M is a coenzyme required for methyl-transfer reactions in the metabolism of methanogens. The coenzyme is an anion with the formula HSCH2CH2SO3-....
, methanofuran
Methanofuran

Methanofuran describes a family of chemical compounds found in methanogenic archaea. These species feature a 2-aminomethylfuran linked to phenoxy group....
, and methanopterin.

Importance in carbon cycle

Methanogenesis is the final step in the decay of organic matter. During the decay process, electron acceptors (such as oxygen
Oxygen

Oxygen no O2 produced; 2) O2 produced, but absorbed in oceans & seabed rock; 3) O2 starts to gas out of the oceans, but is absorbed by land surfaces and formation of ozone layer; 4-5) O2 sinks filled and the gas accumulates]]...
, ferric iron, sulfate
Sulfate

In inorganic chemistry, a sulfate is a salt of sulfuric acid....
, nitrate
Nitrate

In inorganic chemistry, a nitrate is a salt of nitric acid with an ion composed of one nitrogen and three oxygen atoms . In organic chemistry the esters of nitric acid and various alcohols are called nitrates....
, and manganese
Manganese

Manganese is a chemical element, designated by the symbol Mn. It has the atomic number 25. It is found as a Oxidation state in nature , and in many minerals....
) become depleted, while hydrogen
Hydrogen

Hydrogen is the chemical element with atomic number 1. It is represented by the chemical symbol H. At standard temperature and pressure, hydrogen is a colorless, odorless, nonmetallic, tasteless, highly combustion and explosive Diatomic molecule gas with the molecular formula H2....
 (H2) and carbon dioxide
Carbon dioxide

Carbon dioxide is a chemical compound composed of two oxygen atoms covalent bond to a single carbon atom. It is a gas at standard temperature and pressure and exists in Earth's atmosphere in this state....
 accumulate. Light organics produced by fermentation
Fermentation (biochemistry)

Fermentation is the process of deriving energy from the Redox of organic compounds, such as carbohydrates, using an Endogeny electron acceptor, which is usually an organic compound....
 also accumulate. During advanced stages of organic decay, all electron acceptors become depleted except carbon dioxide. Carbon dioxide is a product of most catabolic processes, so it is not depleted like other potential electron acceptor
Electron acceptor

An electron acceptor is a chemical entity that accepts electrons transferred to it from another compound. It is an oxidizing agent that, by virtue of its accepting electrons, is itself reduced in the process....
s.

Only methanogenesis and fermentation can occur in the absence of electron acceptors other than carbon. Fermentation only allows the breakdown of larger organic compounds, and produces small organic compounds. Methanogenesis effectively removes the semi-final products of decay: hydrogen, small organics, and carbon dioxide. Without methanogenesis, a great deal of carbon (in the form of fermentation products) would accumulate in anaerobic environments.

In ruminants

Methanogenesis occurs in the guts of humans and other animals, especially ruminants. In the rumen
Rumen

The rumen, also known as a paunch, forms the larger part of the reticulorumen, which is the first chamber in the alimentary canal of ruminant animals....
, anaerobic organisms including methanogens digest cellulose into forms usable by the animal, without them, livestock such as cattle would not be able to graze grass. The useful products of methanogenesis are absorbed by the gut, but the methane is released from the animal mainly by belching (eructation). The average cow emits around 600 litres of methane per day.

In humans


Some humans produce flatus that contains methane. In one study of the faeces of nine adults, only five of the samples contained archaea
Archaea

The Archaea are a group of single-celled microorganisms. A single individual or species from this domain is called an archaeon . Archaea, like bacteria, are prokaryotic....
 capable of producing methane. Similar results are found in samples of gas obtained from within the rectum
Rectum

The rectum is the final straight portion of the large intestine in some mammals, and the Gastrointestinal tract in others, terminating in the anus....
.

Even among humans whose flatus does contain methane, the amount is only 0% - 10% of the total amount of gas.

Role in global warming

Methane in the Earth's atmosphere is an important greenhouse gas
Greenhouse gas

Greenhouse gases are gases in an atmosphere that Absorption and Emission radiation within the Infrared#Different regions in the infrared range....
 with a global warming potential 21 times greater than carbon dioxide (averaged over 100 years), and methanogenesis in livestock and the decay of organic material is thus a considerable contributor to global warming. It may not be a net contributor in the sense that it works on organic material which used up atmospheric carbon dioxide when it was created, but its overall effect is to convert the carbon dioxide into methane which is a much more potent greenhouse gas.

Methanogenesis can also be beneficially exploited, to treat organic waste, to produce useful compounds, and the methane can be collected and used as biogas
Biogas

Bio-gas typically refers to a gas produced by the biological breakdown of organic matter in the absence of oxygen. Biogas originates from biogenic material and is a type of biofuel....
, a fuel.

Methanogenesis and Extra-Terrestrial life

The presence of atmospheric methane has a role in the scientific search for extra-terrestrial life. The argument being that methane in the atmosphere will eventually dissipate, unless something is replenishing it. This an be detected (by using a spectrometer
Spectrometer

A spectrograph is an optical instrument used to measure properties of light over a specific portion of the electromagnetic spectrum, typically used in spectroscopic analysis to identify materials....
 for example) then that means there is, or relatively recently was, life present. This was debated when methane was discovered in the Martian atmosphere by (among others) the Mars Express Orbiter (2004) and in Titan's atmosphere by the Huygens probe
Huygens probe

The Huygens probe, supplied by the European Space Agency and named after the Dutch 17th century astronomer Christiaan Huygens, was an atmospheric entry probe carried to Saturn 's moon Titan as part of the Cassini-Huygens mission....
 (2005). It is also argued that atmospheric methane can come from volcanoes or other fissures in the planet's crust and that without an Isotopic signature
Isotopic signature

An isotopic signature is a ratio of stable or unstable isotopes of particular elements found in an investigated material. The atomic mass of different isotopes affect their chemical kinetics behavior, leading to natural isotope separation processes....
 it is difficult to say what exactly was the origin.

See also

  • Anaerobic digestion
    Anaerobic digestion

    Anaerobic digestion is a series of processes in which microorganisms break down biodegradable material in the absence of oxygen. It is widely used to treat wastewater sludges and biodegradable waste because it provides volume and mass reduction of the input material....
  • Hydrogen cycle
    Hydrogen cycle

    Hydrogen is one of the constituents of water. It recycles as in other biogeochemical cycles. It is actively involved with the other cycles like the carbon cycle, nitrogen cycle ,sulfur cycle and oxygen cycle as well....