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Lignin



 
 
Lignin or lignen is a complex chemical compound
Chemical compound

A chemical compound is a Chemical substance consisting of two or more different chemical element Chemical bond together in a fixed mass ratio that can be split into simpler substances....
 most commonly derived from wood
Wood

Wood is an organic material; in the strict sense wood is produced as secondary xylem in the stems of woody plants, notably trees but also shrubs, etc....
, and an integral part of the secondary cell wall
Cell wall

A cell wall is a tough, flexible and sometimes fairly rigid layer that surrounds some types of cell . It is located outside the cell membrane and provides these cells with structural support and protection, and also acts as a filtering mechanism....
s of plant
Plant

Plants are Life organisms belonging to the Kingdom Plantae. They include familiar organisms such as trees, herbs, bushes, grasses, vines, ferns, mosses, and green algae....
s and some algae. The term was introduced in 1819 by de Candolle
A. P. de Candolle

Augustin Pyramus de Candolle also spelt Augustin Pyrame de Candolle was a botanist. The author citation used in citing botanical name he published is "DC."....
 and is derived from the Latin word lignum, meaning wood. It is one of the most abundant organic polymers on Earth
Earth

Earth is the third planet from the Sun. Earth is the largest of the terrestrial planets in the Solar System in diameter, mass and density. It is also referred to as the World and Wiktionary:Terra.Note that by International Astronomical Union convention, the term "Terra" is used for naming extensive land masses, rather...
, exceeded only by cellulose
Cellulose

File:Cellulose Sessel.svgCellulose is an organic compound with the chemical formula , a polysaccharide consisting of a linear chain of several hundred to over ten thousand ? linked D-glucose units....
, employing 30% of non-fossil
Fossil

Fossils are the preserved remains or trace fossil of animals, plants, and other organisms from the remote past. The totality of fossils, both discovered and undiscovered, and their placement in fossiliferous Rock formations and sedimentary rock layers is known as the fossil record....
 organic carbon
Organic chemistry

Organic chemistry is a discipline within chemistry which involves the science study of the structure, properties, composition, chemical reaction, and preparation of chemical compounds that contain carbon....
 and constituting from a quarter to a third of the dry mass of wood
Wood

Wood is an organic material; in the strict sense wood is produced as secondary xylem in the stems of woody plants, notably trees but also shrubs, etc....
.






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Lignin or lignen is a complex chemical compound
Chemical compound

A chemical compound is a Chemical substance consisting of two or more different chemical element Chemical bond together in a fixed mass ratio that can be split into simpler substances....
 most commonly derived from wood
Wood

Wood is an organic material; in the strict sense wood is produced as secondary xylem in the stems of woody plants, notably trees but also shrubs, etc....
, and an integral part of the secondary cell wall
Cell wall

A cell wall is a tough, flexible and sometimes fairly rigid layer that surrounds some types of cell . It is located outside the cell membrane and provides these cells with structural support and protection, and also acts as a filtering mechanism....
s of plant
Plant

Plants are Life organisms belonging to the Kingdom Plantae. They include familiar organisms such as trees, herbs, bushes, grasses, vines, ferns, mosses, and green algae....
s and some algae. The term was introduced in 1819 by de Candolle
A. P. de Candolle

Augustin Pyramus de Candolle also spelt Augustin Pyrame de Candolle was a botanist. The author citation used in citing botanical name he published is "DC."....
 and is derived from the Latin word lignum, meaning wood. It is one of the most abundant organic polymers on Earth
Earth

Earth is the third planet from the Sun. Earth is the largest of the terrestrial planets in the Solar System in diameter, mass and density. It is also referred to as the World and Wiktionary:Terra.Note that by International Astronomical Union convention, the term "Terra" is used for naming extensive land masses, rather...
, exceeded only by cellulose
Cellulose

File:Cellulose Sessel.svgCellulose is an organic compound with the chemical formula , a polysaccharide consisting of a linear chain of several hundred to over ten thousand ? linked D-glucose units....
, employing 30% of non-fossil
Fossil

Fossils are the preserved remains or trace fossil of animals, plants, and other organisms from the remote past. The totality of fossils, both discovered and undiscovered, and their placement in fossiliferous Rock formations and sedimentary rock layers is known as the fossil record....
 organic carbon
Organic chemistry

Organic chemistry is a discipline within chemistry which involves the science study of the structure, properties, composition, chemical reaction, and preparation of chemical compounds that contain carbon....
 and constituting from a quarter to a third of the dry mass of wood
Wood

Wood is an organic material; in the strict sense wood is produced as secondary xylem in the stems of woody plants, notably trees but also shrubs, etc....
. As a biopolymer
Biopolymer

Biopolymers are a class of polymers produced by living organisms.Starch, proteins and peptides,and DNA and RNA are all examples of biopolymers, in which the monomeric units, respectively, are sugars, amino acids, and nucleotides....
, lignin is unusual because of its heterogeneity and lack of a defined primary structure. Its most commonly noted function is the support through strengthening of wood (xylem cells) in trees.

Biological function

Lignin fills the spaces in the cell wall
Cell wall

A cell wall is a tough, flexible and sometimes fairly rigid layer that surrounds some types of cell . It is located outside the cell membrane and provides these cells with structural support and protection, and also acts as a filtering mechanism....
 between cellulose
Cellulose

File:Cellulose Sessel.svgCellulose is an organic compound with the chemical formula , a polysaccharide consisting of a linear chain of several hundred to over ten thousand ? linked D-glucose units....
, hemicellulose
Hemicellulose

A hemicellulose can be any of several heteropolymers present in almost all plant cell walls along with cellulose. While cellulose is crystalline, strong, and resistant to hydrolysis, hemicellulose has a random, amorphous structure with little strength....
, and pectin
Pectin

Pectin is a structural heteropolysaccharide contained in the primary cell walls of terrestrial plants. It was first isolated and described in 1825 by Henri Braconnot....
 components, especially in tracheid
Tracheid

Tracheids are elongated cell s in the xylem of vascular plants, serving in the transport of water and mineral salts. The build of tracheids will vary according to where they occur....
s, sclereids and xylem
Xylem

In vascular plants, xylem is one of the two types of transport tissue, phloem being the other. The word "xylem" is derived from classical Greek language ????? , "wood", and indeed the best known xylem tissue is wood, though it is found throughout the plant....
. It is covalently linked to hemicellulose
Hemicellulose

A hemicellulose can be any of several heteropolymers present in almost all plant cell walls along with cellulose. While cellulose is crystalline, strong, and resistant to hydrolysis, hemicellulose has a random, amorphous structure with little strength....
 and thereby crosslinks different plant polysaccharide
Polysaccharide

Polysaccharides are relatively complex carbohydrates. They are polymers made up of many monosaccharides joined together by glycosidic bonds. They are therefore very large, often branched, macromolecules....
s, conferring mechanical strength to the cell wall
Cell wall

A cell wall is a tough, flexible and sometimes fairly rigid layer that surrounds some types of cell . It is located outside the cell membrane and provides these cells with structural support and protection, and also acts as a filtering mechanism....
 and by extension the plant as a whole. It is particularly abundant in compression wood
Reaction wood

Reaction wood is formed in response to mechanical stress, and helps to bring parts of the plant in an optimal position. Reaction wood forms when a woody plant part is subjected to mechanical stress....
 but scarce in tension wood
Reaction wood

Reaction wood is formed in response to mechanical stress, and helps to bring parts of the plant in an optimal position. Reaction wood forms when a woody plant part is subjected to mechanical stress....
.

Lignin plays a crucial part in conducting water in plant
Plant

Plants are Life organisms belonging to the Kingdom Plantae. They include familiar organisms such as trees, herbs, bushes, grasses, vines, ferns, mosses, and green algae....
 stems. The polysaccharide
Polysaccharide

Polysaccharides are relatively complex carbohydrates. They are polymers made up of many monosaccharides joined together by glycosidic bonds. They are therefore very large, often branched, macromolecules....
 components of plant cell wall
Cell wall

A cell wall is a tough, flexible and sometimes fairly rigid layer that surrounds some types of cell . It is located outside the cell membrane and provides these cells with structural support and protection, and also acts as a filtering mechanism....
s are highly hydrophilic and thus permeable to water, whereas lignin is more hydrophobic. The crosslinking of polysaccharides by lignin is an obstacle for water absorption to the cell wall. Thus, lignin makes it possible for the plant's vascular tissue to conduct water efficiently. Lignin is present in all vascular plant
Vascular plant

Vascular plants are those plants that have lignin tissue for conducting water, minerals, and photosynthetic products through the plant. Vascular plants include the ferns, clubmosses, flowering plants, conifers and other gymnosperms....
s, but not in bryophyte
Bryophyte

Bryophytes are all embryophytes that are non-vascular plant: they have tissues and enclosed reproductive systems, but they lack vascular tissue that circulates liquids....
s, supporting the idea that the original function of lignin was restricted to water transport. However, it is present in red algae, which seems to suggest that the plant-red alga common ancestor also synthesised lignin. This would suggest that its original function was structural; it plays this role in the red alga Calliarthron
Calliarthron

Calliarthron is a genus containing four species of thalloid intertidal alga. Specimens can reach around 30 cm in size. The thalli take a crustose form....
, where it supports joints between calcified segments.

Lignin is indigestible by animal enzyme
Enzyme

Enzymes are biomolecules that catalysis chemical reactions. Almost all enzymes are proteins. In enzymatic reactions, the molecules at the beginning of the process are called Substrate , and the enzyme converts them into different molecules, the products....
s, but some fungi and bacteria
Bacteria

The Bacteria are a large group of unicellular microorganisms. Typically a few micrometres in length, bacteria have a wide range of shapes, ranging from spheres to rods and spirals....
 are able to secrete ligninases
Ligninase

Ligninase is the original term encompassing many different types of oxidative, extracellular fungal enzyme which catalyze the breakdown of Lignin which is commonly found in the Cell wall of Plant....
 which can biodegrade
Biodegradation

Biodegradation is the process by which organic compound substances are decomposition by the enzymes produced by living organisms. The term is often used in relation to ecology, waste management and natural environmental environmental remediation ....
 the polymer. The details of the biodegradation are not well understood. The pathway depends on the type of wood decay - in fungi either brown rot
Brown rot

Brown rot is a fungal condition that attacks stone fruit, commonly affecting peaches, pears, apples and plums. The fruit develops small brown squishy circles, which gradually spread over the surface of the fruit....
, soft rot or white rot. The enzymes involved may employ free radicals for depolymerization reactions. Well understood lignolytic enzymes are manganese peroxidase
Manganese peroxidase

In enzymology, a manganese peroxidase is an enzyme that catalysis the chemical reactionThe 3 substrate of this enzyme are Mn, hydrogen ion, and hydrogen peroxide, whereas its two product are Mn and water....
, lignin peroxidase and cellobiose dehydrogenase. Furthermore, because of its cross-linking with the other cell wall components, it minimizes the accessibility of cellulose and hemicellulose to microbial enzymes. Hence, lignin is generally associated with reduced digestibility of the overall plant biomass, which helps defend against pathogens and pests.

Lignin peroxidase (also "ligninase", EC number
EC number

The Enzyme Commission number is a numbering scheme scheme for enzymes, based on the chemical reactions they catalysis.As a system of enzyme nomenclature, every EC number is associated with a recommended name for the respective enzyme....
 1.14.99) is a hemoprotein
Hemoprotein

A hemeprotein , or heme protein, is a metalloprotein containing a heme prosthetic group, either Covalent bond or noncovalently chemical bond to the protein itself....
 from the white-rot fungus Phanerochaete chrysosporium with a variety of lignin-degrading reactions, all dependent on hydrogen peroxide
Hydrogen peroxide

Hydrogen peroxide is a very pale blue liquid which appears colorless in a dilute solution, slightly more viscous than water. It is a weak acid....
 to incorporate molecular oxygen into reaction products. There are also several other microbial enzymes that are believed to be involved in lignin biodegradation, such as manganese peroxidase
Manganese peroxidase

In enzymology, a manganese peroxidase is an enzyme that catalysis the chemical reactionThe 3 substrate of this enzyme are Mn, hydrogen ion, and hydrogen peroxide, whereas its two product are Mn and water....
, laccase
Laccase

Laccases are copper-containing oxidase enzymes that are found in many plants, fungi, and microorganisms. The copper is bound in several sites; Type 1, Type 2, and/or Type 3....
 and Cellobiose dehydrogenase (acceptor)
Cellobiose dehydrogenase (acceptor)

In enzymology, a cellobiose dehydrogenase is an enzyme that catalysis the chemical reactionThus, the two substrate of this enzyme are cellobiose and acceptor, whereas its two product are cellobiono-1,5-lactone and reduced acceptor....
.

Ecological function

Lignin plays a significant role in the carbon cycle
Carbon cycle

The carbon cycle is the biogeochemical cycle by which carbon is exchanged among the biosphere, pedosphere, geosphere, hydrosphere, and Earth's atmosphere of the Earth....
, sequestering atmospheric carbon into the living tissues of woody perennial vegetation
Vegetation

refers to the flora system of a specific region....
. Lignin is one of the most slowly decomposing components of dead vegetation, contributing a major fraction of the material that becomes humus
Humus

Humus is degraded organic material in soil, which causes some soil layers to be dark brown or black.In soil science, humus refers to any organic matter that has reached a point of stability, where it will break down no further and might, if conditions do not change, remain essentially as it is for centuries, if not millennia....
 as it decomposes. The resulting soil humus generally increases the photosynthetic productivity of plant communities growing on a site as the site transitions from disturbed mineral soil through the stages of ecological succession
Ecological succession

Ecological succession, a fundamental concept in ecology, refers to more-or-less predictable and orderly changes in the composition or structure of an ecological Community ....
, by providing increased cation exchange capacity
Cation exchange capacity

In soil science, cation exchange capacity is the capacity of a soil for ion exchange of Electric charge ions between the soil and the soil solution....
 in the soil and expanding the capacity of moisture retention between flood
Flood

A flood is an overflow of an expanse of water that submerges land, a deluge. In the sense of "flowing water", the word may also be applied to the inflow of the tide....
 and drought
Drought

A drought is an extended period of months or years when a region notes a deficiency in its water supply. Generally, this occurs when a region receives consistently below average precipitation ....
 conditions.

Economic significance

Highly lignified wood
Wood

Wood is an organic material; in the strict sense wood is produced as secondary xylem in the stems of woody plants, notably trees but also shrubs, etc....
 is durable and therefore a good raw material for many applications. It is also an excellent fuel
Fuel

Fuel is any material that is burned or altered in order to obtain energy and to heat or to move an object. Fuel releases its energy either through a chemical reaction means, such as combustion, or nuclear means, such as nuclear fission or nuclear fusion....
, since lignin yields more energy when burned than cellulose
Cellulose

File:Cellulose Sessel.svgCellulose is an organic compound with the chemical formula , a polysaccharide consisting of a linear chain of several hundred to over ten thousand ? linked D-glucose units....
. Mechanical, or high yield pulp
Wood pulp

Pulp is a dry fibrous material prepared by chemically or mechanically separating fibers from wood or fiber crops.Pulp can be either fluffy or formed into thick sheets....
 used to make newsprint
Newsprint

Newsprint is low-cost, Preservation paper most commonly used to print newspapers, plus other publications and advertising material. It usually has an off-white cast and distinctive feel....
 contains most of the lignin originally present in the wood. This lignin is responsible for newsprint yellowing with age. Lignin must be removed from the pulp before high quality bleached
Bleaching of wood pulp

Bleaching of wood pulp is the chemical processing carried out on various types of wood pulp to decrease the color of the pulp, so that it becomes whiter....
 paper can be manufactured from it.

In sulfite pulping
Sulfite process

The sulfite process produces wood pulp which is almost pure cellulose fibers by using various salts of sulfurous acid to extract the lignin from wood chips in large pressure vessels called digesters....
, lignin is removed from wood pulp as sulfonate
Sulfonate

A sulfonate is a Salt_ or ester of a sulfonic acid. It contains the functional group R-SO2O-....
s. These lignosulfonates
Lignosulfonates

Lignosulfonates, or sulfonated lignin, are water-soluble anionic polyelectrolyte polymers: they are byproducts from the production of wood pulp using sulfite process....
 have several uses:

  • Dispersant
    Dispersant

    A dispersant or a dispersing agent or a plasticizer is either a non-surface active polymer or a surfactant added to a Suspension , usually a colloid, to improve the separation of wiktionary:Particles and to prevent settling or clumping....
    s in high performance cement
    Cement

    In the most general sense of the word, a cement is a binder, a substance which sets and hardens independently, and can bind other materials together....
     applications, water treatment
    Water treatment

    Water treatment describes those processes used to make water more acceptable for a desired end-use. These can include use as drinking water, industrial processes, medical and many other uses....
     formulations and textile dye
    Dye

    A dye can generally be described as a colored substance that has an Chemical affinity to the Wiktionary:substrate to which it is being applied....
    s


  • Additives in specialty oil field
    Oil field

    An oil field is a region with an abundance of oil wells extracting petroleum from below ground. Because the oil reservoirs typically extend over a large area, possibly several hundred kilometres across, full exploitation entails multiple wells scattered across the area....
     applications and agricultural chemicals


  • Raw materials for several chemicals, such as vanillin
    Vanillin

    Vanillin, methyl vanillin, or 4-hydroxy-3-methoxybenzaldehyde, is an organic compound with the molecular formula C8H8O3....
    , DMSO
    Dimethyl sulfoxide

    Dimethyl sulfoxide is the chemical compound with the chemical formula 2SO. It was first synthesized in 1866 by the Russian scientist Alexander Saytzeff, who reported his findings in a German chemistry journal in 1867....
    , ethanol
    Ethanol

    Ethanol, also called ethyl alcohol, pure alcohol, grain alcohol, or drinking alcohol, is a volatility , flammable, colorless liquid....
    , xylitol
    Xylitol

    Xylitol is an organic compound with the formula 32. This achiral species is one of four isomers of 1,2,3,4,5-pentapentanol....
     sugar and humic acid
    Humic acid

    Humic acid is one of the major components of humic substances which are dark brown and major constituents of soil organic matter humus that contributes to soil chemical and physical quality and are also precursors of some fossil fuels....


  • Environmentally sustainable dust suppression agent for roads


The first investigations into commercial use of lignin were reported by Marathon Corporation in Rothschild
Rothschild, Wisconsin

Rothschild is a village in Marathon County, Wisconsin, Wisconsin, United States. It is part of the Wausau, Wisconsin Metropolitan Statistical Area....
, Wisconsin
Wisconsin

Wisconsin is one of the fifty U.S. state in the United States of America, located in the north central part of the United States. It borders two of the five Great Lakes and four U.S....
 (USA), starting in 1927. The first class of products which showed promise were leather tanning agents. The lignin chemical business of Marathon was operated for many years as Marathon Chemicals. It is now known as LignoTech USA, Inc., and is owned by the Norwegian
Norway

Norway , officially the Kingdom of Norway, is a constitutional monarchy in Northern Europe that occupies the western portion of the Scandinavian Peninsula....
 company, Borregaard
Borregaard

Borregaard is a Norway company, established in 1889 in the southeastern town of Sarpsborg in ?stfold county. Its main products were traditionally pulp and paper....
, itself a subsidiary of the Norwegian conglomerate Orkla AS.

Lignin removed via the kraft process
Kraft process

The kraft process describes a technology for conversion of wood into wood pulp consisting of almost pure cellulose fibers. The process entails treatment of wood chips with a mixture of sodium hydroxide and sodium sulfide that break the bonds that link lignin to the cellulose....
 (sulfate pulping) is usually burned for its fuel value, providing more than enough energy to run the mill and its associated processes.

More recently, lignin extracted from shrubby willow has been successfully used to produce expanded polyurethane foam.

In 2008, a German
Germany

Germany , officially the Federal Republic of Germany , is a country in Central Europe. It is bordered to the north by the North Sea, Denmark, and the Baltic Sea; to the east by Poland and the Czech Republic; to the south by Austria and Switzerland; and to the west by France, Luxembourg, Belgium, and the Netherlands....
 company, Tecnaro, developed a process for turning lignin into a substance, called Arboform, which behaves identically to plastic
Plastic

Plastic is the general common term for a wide range of synthetic or semisynthetic organic chemistry solid materials suitable for the manufacture of industrial products....
 for injection molding. Therefore, it can be used in place of plastic for several applications. When the item is discarded, it can be burned just like wood.

Structure

Monolignolstructure
Lignin is a cross-linked racemic
Racemic

In chemistry, a racemic mixture, or racemate, is one that has equal Amount of substance of left- and right-handed enantiomer of a Chirality molecule....
 macromolecule
Macromolecule

The term macromolecule by definition implies "large molecule". In the context of biochemistry, the term may be applied to the four conventional biopolymers , as well as non-polymeric molecules with large molecular mass such as macrocycles....
 with molecular mass
Molecular mass

The molecular mass of a chemical compound, frequently referred by the older term molecular weight and abbreviated as MW, is the mass of one molecule of that substance, relative to the unified atomic mass unit u ....
es in excess of 10,000 u
Atomic mass unit

The unified atomic mass unit , or dalton or, sometimes, universal mass unit, is a Units of measurement of mass used to express atomic weight and molecular masses....
. It is relatively hydrophobic and aromatic in nature. The degree of polymerisation in nature
Nature

File:Jungle in Punjab.JPGNature, in the broadest sense, is equivalent to the natural world, physical universe, material world or material universe....
 is difficult to measure, since it is fragmented during extraction and the molecule
Molecule

In chemistry, a molecule is defined as a sufficiently stable, electric charge neutral group of at least two atoms in a definite arrangement held together by very strong chemical bonds....
 consists of various types of substructures which appear to repeat in a haphazard manner. Different types of lignin have been described depending on the means of isolation.

There are three monolignol
Monolignol

Monolignols are phytochemicals acting as source materials for biosynthesis of both lignans and lignin. The starting material for production of monolignols is the amino acid phenylalanine....
 monomers, methoxy
Methoxy

In chemistry , methoxy refers to the functional group consisting of a methyl group bound to oxygen. It has the formula:The word is used in organic nomenclature usually to describe an ether....
lated to various degrees: p-coumaryl alcohol
Paracoumaryl alcohol

Paracoumaryl alcohol, also called p-coumaryl alcohol, 4-coumaryl alcohol, 4-hydroxycinnamyl alcohol, or 4-phenol, is a phytochemical, one of the monolignols....
, coniferyl alcohol
Coniferyl alcohol

Coniferyl alcohol is an organic compound. This colourless crystalline solid is a phytochemical, one of the monolignols. It is synthetized via the phenylpropanoid biochemical pathway....
, and sinapyl alcohol
Sinapyl alcohol

Sinapyl alcohol is an organic compound derived from cinnamic acid. This phytochemical is one of the monolignols. It is biosynthesis via the phenylpropanoid biochemical pathway, its immediate precursor being sinapaldehyde....
 (Figure 3). These lignols are incorporated into lignin in the form of the phenylpropanoid
Phenylpropanoid

Phenylpropanoids are a class of plant-derived organic compounds that are biosynthesized from the amino acid phenylalanine. They have a wide variety of functions, including defense against Herbivory, microbial attack, or other sources of injury; as structural components of cell walls; as protection from ultraviolet light; as pigments; and as...
s p-hydroxyphenyl (H), guaiacyl (G), and syringal (S) respectively. Gymnosperm
Gymnosperm

Gymnosperm is a group of spermatophyte seed-bearing plants with ovules on scales, which are usually arranged in cone-like structures. The other major group of seed-bearing plants, the angiosperms, [from the Greek, 'angion' - container] have ovules enclosed in a carpel, a sporophyll with fused margins....
s have a lignin that consists almost entirely of G with small quantities of H. That of dicotyledon
Dicotyledon

Dicotyledons, or "dicots", is a name for a group of flowering plants whose seed typically has two embryonic leaves or cotyledons. There are around 199,350 species within this group....
ous angiosperms is more often than not a mixture of G and S (with very little H), and monocotyledon
Monocotyledon

Monocotyledons or monocots are one of two major groups of flowering plants that are traditionally recognised, the other being dicotyledons or dicots....
ous lignin is a mixture of all three. Many grasses have mostly G, while some palms have mainly S. All lignins contain small amounts of incomplete or modified monolignols, and other monomers are prominent in non-woody plants.

Biosynthesis

Lignin biosynthesis
Biosynthesis

Biosynthesis is a phenomenon wherein chemical compounds are produced from simpler reagents. Biosynthesis, unlike chemosynthesis, takes place within living organisms and is generally catalyst by enzymes....
 (Figure 4) begins in the cytosol
Cytosol

The cytosol or intracellular fluid is the liquid found inside cell . In eukaryotes this liquid is separated by cell membranes from the contents of the organelles suspended in the cytosol, such as the mitochondrial matrix inside the mitochondrion....
 with the synthesis of glycosylated monolignols from the amino acid
Amino acid

In chemistry, an amino acid is a molecule containing both amine and carboxyl functional groups. These molecules are particularly important in biochemistry, where this term refers to alpha-amino acids with the general formula H2NCHRCOOH, where R is an organic substituent....
 phenylalanine
Phenylalanine

Phenylalanine is an a-amino acid with the chemical formula HO2CCHCH2C6H5, which is found naturally in the breast milk of mammals and manufactured for food and drink products and are also sold as nutritional supplements for their reputed analgesic and antidepressant effects....
. These first reactions
Chemical reaction

A chemical reaction is a process that always results in the interconversion of chemical substances. The substance or substances initially involved in a chemical reaction are called reactants....
 are shared with the phenylpropanoid pathway. The attached glucose
Glucose

Glucose , a monosaccharide also known as grape sugar, blood sugar, or corn sugar, is a very important carbohydrate in biology....
 renders them water soluble and less toxic. Once transported through the cell membrane
Cell membrane

The cell membrane is the interface between the cellular machinery inside the cell and the fluid outside.It is a semipermeable lipid bilayer found in all cell ....
 to the apoplast
Apoplast

Within a plant, the apoplast is the free diffusional space outside the plasma membrane. It is interrupted by the Casparian strip in roots, air spaces between plant cells and the cuticula of the plant....
, the glucose is removed and the polymerisation commences. Much about its anabolism
Anabolism

Anabolism is the set of metabolic pathways that construct molecules from smaller units. These reactions require energy. One way of categorizing metabolic processes, whether at the cell ular, organ or organism level is as 'anabolic' or as 'catabolism', which is the opposite....
 is not understood even after more than a century of study.

The polymerisation step, that is a radical-radical coupling, is catalysed
Catalysis

Catalysis is the process in which the reaction rate of a chemical reaction is either increased or decreased by means of a chemical substance known as a catalyst....
 by oxidative enzyme
Oxidative enzyme

An oxidative enzyme is an enzyme which Catalysis oxidation reaction. Two most common types of oxidative enzymes are peroxidases, which use hydrogen peroxide, and oxidases, which use molecular oxygen....
s. Both peroxidase
Peroxidase

Peroxidases are a large family of enzymes. A majority of peroxidase protein sequences can be found in the PeroxiBase database. Peroxidases typically catalyze a reaction of the form:...
 and laccase
Laccase

Laccases are copper-containing oxidase enzymes that are found in many plants, fungi, and microorganisms. The copper is bound in several sites; Type 1, Type 2, and/or Type 3....
 enzymes are present in the plant
Plant

Plants are Life organisms belonging to the Kingdom Plantae. They include familiar organisms such as trees, herbs, bushes, grasses, vines, ferns, mosses, and green algae....
 cell walls, and it is not known whether one or both of these groups participates in the polymerisation. Low molecular weight oxidants might also be involved. The oxidative enzyme catalyses
Catalysis

Catalysis is the process in which the reaction rate of a chemical reaction is either increased or decreased by means of a chemical substance known as a catalyst....
 the formation of monolignol radicals
Radical (chemistry)

In chemistry, radicals are atoms, molecules or ions with unpaired electrons on an otherwise open shell configuration. These unpaired electrons are usually highly chemical reaction, so radicals are likely to take part in chemical reactions....
. These radicals are often said to undergo uncatalyzed coupling to form the lignin polymer
Polymer

A polymer is a large molecule composed of repeating structural units typically connected by covalent chemical bonds. While polymer in popular usage suggests plastic, the term actually refers to a large class of natural and synthetic materials with a variety of properties....
, but this hypothesis has been recently challenged. The alternative theory that involves an unspecified biological control is however not widely accepted.

Pyrolysis

Pyrolysis
Pyrolysis

Pyrolysis is the chemical decomposition of a condensed substance by heating. The word is coined from the Greek language-derived morphemes pyro "fire" and lysys "decomposition"....
 of lignin during the combustion
Combustion

Combustion or burning is a complex sequence of exothermic chemical reactions between a fuel and an oxidant accompanied by the production of heat or both heat and light in the form of either a glow or flames, appearance of light flickering....
 of wood or charcoal
Charcoal

Charcoal is the blackish residue consisting of impure carbon obtained by removing water and other volatile constituents from animal and vegetation substances....
 production yields a range of products, of which the most characteristic ones are methoxy
Methoxy

In chemistry , methoxy refers to the functional group consisting of a methyl group bound to oxygen. It has the formula:The word is used in organic nomenclature usually to describe an ether....
 phenols
Phenols

In organic chemistry, phenols, sometimes called phenolics, are a class of chemical compounds consisting of a hydroxyl Functional group attached to an aromatic hydrocarbon group....
. Of those, the most important are guaiacol
Guaiacol

Guaiacol is a naturally occurring organic compound with the Chemical formula C6H4. This colourless aromatic oil is derived from guaiacum or wood creosote....
 and syringol
Syringol

Syringol is a dimethyl ether of pyrogallol. It is slightly soluble in water. It is combustible, with flash point of 140 ?C.Together with guaiacol, syringol is a characteristic product of pyrolysis of lignin....
 and their derivatives; their presence can be used to trace a smoke
Smoke

File:Bling-Bling Skywriting David Shankbone.jpgSmoke is the collection of airborne solid and liquid particulates and gases emitted when a material undergoes combustion or pyrolysis, together with the quantity of air that is entrainment or otherwise mixed into the mass....
 source to a wood fire. In cooking
Cooking

Cooking is the process of preparing food by applying heat, selecting, measuring and combining of ingredients in an ordered procedure for producing safe and edible food....
, lignin in the form of hardwood
Hardwood

The term hardwood is used to describe wood from non-monocot flowering plant trees and for those trees themselves. These are usually broad-leaved; in temperate and boreal latitudes they are mostly deciduous, but in tropics and subtropics mostly evergreen....
 is an important source of these two chemicals which impart the characteristic aroma and taste to smoked foods.

External links

  • A promotional site by a trade association of lignin manufacturers and users.
  • - breakthrough efficiency achieved in converting lignin into liquid hydrocarbons, New Scientist, 18 July 2008