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Genetic diversity

 

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Genetic diversity



 
 
Genetic diversity is a level of biodiversity
Biodiversity

Biodiversity is the variation of life forms within a given ecosystem, biome, or for the entire Earth. Biodiversity is often used as a measure of the health of biological systems....
 that refers to the total number of genetic
Genetics

Genetics , a discipline of biology, is the science of heredity and Genetic variation in living organisms. The fact that living things inherit traits from their parents has been used since prehistoric times to improve crop plants and animals through selective breeding....
 characteristics in the genetic makeup of a species. It is distinguished from genetic variability
Genetic variability

Genetic variability is a measure of the tendency of individual genotype in a population to vary from one another. Variability is different from genetic diversity, which is the amount of variation seen in a particular population....
, which describes the tendency of genetic characteristics to vary.

The academic field of population genetics
Population genetics

Population genetics is the study of the allele frequency distribution and change under the influence of the four evolutionary processes: natural selection, genetic drift, mutation and gene flow....
 includes several hypotheses and theories regarding genetic diversity. The neutral theory of evolution proposes that diversity is the result of the accumulation of neutral substitutions.






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Genetic diversity is a level of biodiversity
Biodiversity

Biodiversity is the variation of life forms within a given ecosystem, biome, or for the entire Earth. Biodiversity is often used as a measure of the health of biological systems....
 that refers to the total number of genetic
Genetics

Genetics , a discipline of biology, is the science of heredity and Genetic variation in living organisms. The fact that living things inherit traits from their parents has been used since prehistoric times to improve crop plants and animals through selective breeding....
 characteristics in the genetic makeup of a species. It is distinguished from genetic variability
Genetic variability

Genetic variability is a measure of the tendency of individual genotype in a population to vary from one another. Variability is different from genetic diversity, which is the amount of variation seen in a particular population....
, which describes the tendency of genetic characteristics to vary.

The academic field of population genetics
Population genetics

Population genetics is the study of the allele frequency distribution and change under the influence of the four evolutionary processes: natural selection, genetic drift, mutation and gene flow....
 includes several hypotheses and theories regarding genetic diversity. The neutral theory of evolution proposes that diversity is the result of the accumulation of neutral substitutions. Diversifying selection
Disruptive selection

Disruptive selection, also called diversifying selection, is a descriptive term used to describe changes in population genetics that simultaneously favor individuals at both extremes of the distribution....
 is the hypothesis that two subpopulations of a species live in different environments that select for different alleles
Allele

An allele is one member of a pair or series of different forms of a gene. Usually alleles are coding region, but sometimes the term is used to refer to a junk DNA....
 at a particular locus. This may occur, for instance, if a species has a large range relative to the mobility of individuals within it. Frequency-dependent selection is the hypothesis that as alleles become more common, they become less fit. This is often invoked in host-pathogen interactions, where a high frequency of a defensive allele among the host means that it is more likely that a pathogen will spread if it is able to overcome that allele.

Importance of genetic diversity

There are many different ways to measure genetic diversity. The modern causes for the loss of animal genetic diversity have also been studied and identified. A 2007 study conducted by the National Science Foundation
National Science Foundation

The National Science Foundation is a United States government agency that supports fundamental research and education in all the non-medical fields of science and engineering....
 found that genetic diversity and biodiversity
Biodiversity

Biodiversity is the variation of life forms within a given ecosystem, biome, or for the entire Earth. Biodiversity is often used as a measure of the health of biological systems....
 are dependent upon each other -- that diversity within a species is necessary to maintain diversity among species, and vice versa. According to the lead researcher in the study, Dr. Richard Lankau, "If any one type is removed from the system, the cycle can break down, and the community becomes dominated by a single species."

Survival and adaptation

Genetic diversity plays a huge role in survival and adaptability of a species. When a species’s environment changes, slight gene variations are necessary for it to adapt and survive. A species that has a large degree of genetic diversity among its population will have more variations from which to choose the most fit alleles. Species that have very little genetic variation are at a great risk. With very little gene variation within the species, healthy reproduction becomes increasingly difficult, and offspring often deal with similar problems to those of inbreeding
Inbreeding

Inbreeding is biological reproduction between close Kinships, whether plant or animal. If practiced repeatedly, it leads to an increase in homozygosity of a population....
.

Agricultural relevance

When humans initially started farming, they used selective breeding
Selective breeding

Selective breeding in domesticated animals is the process of a Breeder developing a cultivated breed over time, and selecting qualities within individuals of the breed that will be best to pass on to the next generation....
 to pass on desirable traits of the crops while omitting the undesirable ones. Selective breeding leads to monocultures: entire farms of nearly genetically identical plants. Little to no genetic diversity makes crops extremely susceptible to widespread disease. Bacteria morph and change constantly. When a disease causing bacterium changes to attack a specific genetic variation, it can easily wipe out vast quantities of the species. If the genetic variation that the bacterium is best at attacking happens to be that which humans have selectively bred to use for harvest, the entire crop will be wiped out.

A very similar occurrence is the cause of the infamous Potato Famine
Potato famine

Potato famine may refer to:* Great Irish Famine, the famine in Ireland between 1845 and 1849* Highland Potato Famine, a major agrarian crisis in the Scottish Highlands from 1846 to 1857...
 in Ireland. Since new potato plants do not come as a result of reproduction but rather from pieces of the parent plant, no genetic diversity is developed, and the entire crop is essentially a clone of one potato, it is especially susceptible to an epidemic. In the 1840s, much of Ireland’s population depended on potatoes for food. They planted namely the “lumper” variety of potato, which was susceptible to a rot-causing plasmodiophorid called Phytophthora infestans
Phytophthora infestans

Phytophthora infestans is an oomycete that causes the serious potato disease known as late blight or potato blight. . It was a major culprit in the Irish Potato Famine and Highland Potato Famine potato famines....
. This plasmodiophorid destroyed the vast majority of the potato crop, and left tens of thousands of people to starve to death.

Coping with poor genetic diversity

The natural world has several ways of preserving or increasing genetic diversity. Among oceanic plankton
Plankton

Plankton consist of any drifting organisms that inhabit the pelagic zone of oceans, seas, or bodies of fresh water. Plankton are defined by their ecological niche rather than their Phylogenetics or taxonomy classification....
, viruses aid in the genetic shifting process. Ocean viruses, which infect the plankton, carry genes of other organisms in addition their own. When a virus
Virus

A virus is a Optical microscope#Limitations of light microscopes infectious agent that is unable to grow or reproduce outside a host cell . Viruses infect all cellular life....
 containing the genes of one cell infects another, the genetic makeup of the latter changes. This constant shift of genetic make-up helps to maintain a healthy population of plankton despite complex and unpredictable environmental changes.

Cheetah
Cheetah

The cheetah is an atypical member of the cat family that is unique in its speed, while lacking climbing abilities. Therefore it is placed in its own genus, Acinonyx....
s are a threatened species
Threatened species

Threatened species are any species which are vulnerable to extinction in the near future.World Conservation Union is the foremost authority on threatened species, and treats threatened species not as a single category, but as a group of three categories: Vulnerable species, endangered species, and Critically endangered species, depending...
. Extremely low genetic diversity and resulting poor sperm quality has made breeding and survivorship difficult for cheetahs –- only about 5% of cheetahs survive to adulthood. About 10,000 years ago, all but the jubatus species of cheetahs died out. The species encountered a population bottleneck
Population bottleneck

A population bottleneck is an evolutionary event in which a significant percentage of a population or species is killed or otherwise prevented from reproducing....
 and close family relatives were forced to mate with each other, or inbreed
Inbreeding

Inbreeding is biological reproduction between close Kinships, whether plant or animal. If practiced repeatedly, it leads to an increase in homozygosity of a population....
. However, it has been recently discovered that female cheetahs can mate with more than one male per litter of cubs. They undergo induced ovulation, which means that a new egg is produced every time a female mates. By mating with multiple males, the mother increases the genetic diversity within a single litter of cubs.

Measures of genetic diversity

Genetic Diversity of a population can be assessed by some simple measures.

  • Gene Diversity is the proportion of polymorphic
    Polymorphism (biology)

    Polymorphism in biology occurs when two or more clearly different phenotypes exist in the same population of a species ? in other words, the occurrence of more than one form or morph....
     loci across the genome
    Genome

    In classical genetics, the genome of a diploid organism including eukarya refers to a full set of chromosomes or genes in a gamete; thereby, a regular somatic cell contains two full sets of genomes....
    .
  • Heterozygosity
    Zygosity

    In genetics, zygosity refers to the similarity or dissimilarity of the DNA sequences in specific coding segments, or genes, on the homologous chromosomes chromosomes of a zygote, or fertilisation ovum....
     is the mean number of individuals with polymorphic loci.
  • Alleles per locus is also used to demonstrate variability.


See also

  • Genetic variability
    Genetic variability

    Genetic variability is a measure of the tendency of individual genotype in a population to vary from one another. Variability is different from genetic diversity, which is the amount of variation seen in a particular population....
  • Human Variome Project
    Human Variome Project

    The Human Variome Project is the global initiative to collect and curate all human genetic variation affecting human health. Its mission is to improve health outcomes by facilitating the unification of data on human genetic variation and its impact on human health....
  • International HapMap Project
    International HapMap Project

    The International HapMap Project is an organization whose goal is to develop a haplotype map of the human genome , which will describe the common patterns of human genetic variability....