Encyclopedia
Fluorescence is a luminescence that is mostly found as an
optical phenomenon in cold bodies, in which the molecular absorption of a
photon triggers the emission of another photon with a longer
wavelength. The energy difference between the absorbed and emitted photons ends up as molecular vibrations or
heat. Usually the absorbed photon is in the
ultraviolet range, and the emitted
light is in the visible range, but this depends on the absorbance curve and
Stokes shift of the particular fluorophore. Fluorescence is named after the
mineral fluorite, composed of
calcium fluoride, which often exhibits this phenomenon.
Equations
Physical Process
Fluorescence occurs when a molecule or
quantum dot relaxes to its ground state after being electronically excited.
Excitation:
Fluorescence :
is a generic term for photon energy where: h =
Planck's constant and =
frequency of light.
State S
0 is called the ground state of the fluorophore and S
1 is its first excited state.
A molecule in its excited state, S
1, can relax by various competing pathways. It can undergo 'non-radiative relaxation' in which the excitation energy is dissipated as heat to the solvent. Excited organic molecules can also relax via conversion to a triplet state which may subsequently relax via
phosphorescence or by a secondary non-radiative relaxation step.
Relaxation of an S
1 state can also occur through interaction with a second molecule through fluorescence quenching. Molecular
oxygen is an extremely efficient quencher of fluorescence because of its unusual triplet ground state.
Molecules that are excited through light absorption or via a different process can transfer energy to a second 'sensitizer' molecule, which is converted to its excited state and can then fluoresce. This process is used in
lightsticks.
Fluorescence Quantum Yield
The fluorescence quantum yield gives the efficiency of the fluorescence process. It is defined as the ratio of the number of photons emitted to the number of photons absorbed.
The maximum fluorescence quantum yield is 1.0 ; every
photon absorbed results in a photon emitted. Compounds with quantum yields of 0.10 are still considered quite fluorescent. Another way to define the quantum yield of fluorescence, is by the rates excited state decay:
where is the rate of
spontaneous emission of radiation and is the sum of all rates of excited state decay. Other rates of excited state decay are caused by mechanisms other than photon emission and are therefore
often called "non-radiative rates", which can include:
dynamic collisional quenching, near-field dipole-dipole interaction , internal conversion and inter-system crossing. Thus, if the rate of any pathway changes, this will affect both the excited state lifetime and the fluorescence quantum yield.
Fluorescence quantum yield are measured by comparison to a standard with known quantum yield; the
quinine salt, quinine sulfate, in a sulfuric acid solution is a common fluorescence standard.
Fluorescence Lifetime
The fluorescece lifetime refers to the time the molecule stays in its excited state before emitting a photon. Fluorescence typically follows first-order kinetics:
is the remaining concentration of excited state molecules at time = t, is the initial concentration after excitation. The lifetime is related to the rates of excited state decay as:
Thus, it is similar to a first-order chemical reaction in which the first-order rate constant is the sum of all of the rates . Thus, the lifetime is related to the facility of the relaxation pathway. If the rate of spontaneous emission, or any of the other rates are fast the lifetime is short . The fluorescence lifetime is an important parameter for practical applications of fluorescence such as
Fluorescence resonance energy transfer.
Rules
There are several
rules that deal with fluorescence. The
Kasha–Vavilov rule dictates that the quantum yield of luminescence is independent of the wavelength of exciting radiation.
This is not quite true and is violated severely in many simple molecules. A somewhat more reliable statement, although still with exceptions, would be that the fluorescence spectrum shows very little dependence on the wavelength of exciting radiation.
The
Jablonski diagram describes most of the relaxation mechanism for excited state molecules.
Applications
There are many natural and synthetic compounds that exhibit fluorescence, and they have a number of applications:
The common
fluorescent tube relies on fluorescence. Inside the glass tube is a partial vacuum and a small amount of mercury. An electric discharge in the tube causes the mercury atoms to emit light. The emitted light is in the
ultraviolet range and is invisible, and also harmful to living organisms, so the tube is lined with a coating of a fluorescent material, called the
phosphor, which absorbs the ultraviolet and re-emits visible light. Fluorescent lighting is very energy efficient compared to
incandescent technology, but
over-illumination and unnatural
spectra can lead to adverse health effects.
Recently, white
light-emitting diodes have become available, which work through a similar process. Typically, the actual light-emitting
semiconductor produces light in the blue part of the spectrum, which strikes a phosphor compound deposited on a reflector; the phosphor fluoresces in the orange part of the spectrum, the combination of the two colors producing a net effect of apparently white light.
Compact fluorescent lighting is the same as any typical fluorescent lamp with advantages. It is self-ballasted and used to replace incandescents in most applications. They are highly efficient with high CRI and good color temp index rating.
The modern
mercury vapor streetlight is said to have been evolved from the fluorescent lamp.
Glow sticks oxidise
phenyl oxalate ester in order to produce light.
Biochemistry and medicine
There is a wide range of applications for fluorescence in this field. Large biological molecules can have a fluorescent chemical group attached by a chemical reaction, and the fluorescence of the attached tag enables very sensitive detection of the molecule.
Examples:
- automated sequencing of DNA by the chain termination method; each of four different chain terminating bases has its own specific fluorescent tag. As the labeled DNA molecules are separated, the fluorescent label is excited by a UV source, and the identity of the base terminating the molecule is identified by the wavelength of the emitted light.
- DNA detection: the compound ethidium bromide, when free to change its conformation in solution, has very little fluorescence. Ethidium bromide's fluorescence is greatly enhanced when it binds to DNA, so this compound is very useful in visualising the location of DNA fragments in agarose gel electrophoresis
- The DNA microarray
- Immunology: An antibody has a fluorescent chemical group attached, and the sites where the antibody has bound can be seen, and even quantified, by the fluorescence.
- FACS
- Fluorescence has been used to study the structure and conformations of DNA and proteins with techniques such as Fluorescence resonance energy transfer. This is especially important in complexes of multiple biomolecules.
- Aequorin, from the jellyfish Aequorea victoria, also called the crystal jelly, is a bioluminescent [i] jellyfish [i] found ...
, produces a blue glow in the presence of Ca2+ ions . It has been used to image calcium flow in cells in real time. The success with aequorin spurred further investigation of A. victoria and led to the discovery of Green Fluorescent Protein , which has become an extremely important research tool. GFP and related proteins are used as reporters for any number of biological events including such things as sub-cellular localization. Levels of gene expression are sometimes measured by linking a gene for GFP production to another gene.
Also, many biological molecules have an intrinsic fluorescence that can sometimes be used without the need to attach a chemical tag. Sometimes this intrinsic fluorescence changes when the molecule is in a specific environment, so the distribution or binding of the molecule can be measured.
Bilirubin, for instance, is highly fluorescent when bound to a specific site on serum albumin. Zinc protoporphyrin, formed in developing red blood cells instead of hemoglobin when iron is unavailable or lead is present, has a bright fluorescence and can be used to detect these problems.
As of 2006, the number of fluorescence applications is growing in the biomedical biological and related sciences. Methods of analysis in these fields are also growing, albeit with increasingly unfortunate nomenclature in the form of acronyms such as: FLIM, FLI, FLIE,
FRET, FRAP, FCS, PFRAP, smFRET, FIONA, FRIPS, SHREK, SHRIMP.
Gemology, mineralogy and forensics
Gemstones,
minerals, fibers and many other materials which may be encountered in forensics or with a relationship to various collectibles may have a distinctive fluorescence or may fluoresce differently under short-wave ultraviolet, long-wave ultra violet, or
X-rays.
Many types of calcite and will fluoresce under shortwave UV.
Rubies,
emeralds, and the
Hope Diamond exhibit red fluorescence under short-wave UV light; diamonds also emit light under
X ray radiation.
Organic liquids
Organic liquids such as mixtures of
anthracene in
benzene or
toluene, or
stilbene in the same solvents,
fluoresce with
ultraviolet or
gamma ray irradiation. The decay times of this fluorescence is of the order of nanoseconds since the duration of the light depends on the lifetime of the excited states of the fluorescent material, in this case anthracene or stilbene.
See also
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External links
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