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Endoplasmic reticulum

 
Endoplasmic Reticulum

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Endoplasmic reticulum



 
 
The endoplasmic reticulum (ER) is a eukaryotic
Eukaryote

Animals, plants, fungus, and protists are eukaryotes , organisms whose Cell are organized into complex structures enclosed within Cell membrane....
 organelle
Organelle

In cell biology, an organelle is a specialized subunit within a cell that has a specific function, and is usually separately enclosed within its own lipid membrane....
 that forms an interconnected network of tubules, vesicles
Vesicle (biology)

A vesicle is a small bubble of liquid within a cell. More technically, a vesicle is a small, intracellular, membrane-enclosed sac that stores or transports substances within a cell....
, and cisterna
Cisterna

A cisterna comprises a flattened membrane disk that makes up the Golgi apparatus. A typical Golgi has anywhere from 3 to 7 cisternae stacked upon each other like a stack of dinner plates, but there are usually around 6....
e within cells
Cell (biology)

The cell is the structural and functional unit of all known Life organisms. It is the smallest unit of an organism that is classified as living, and is often called the building bricks of life....
. The lacey membranes of the endoplasmic reticulum were first seen by Keith R. Porter
Keith R. Porter

Keith R. Porter was a Canada Cell biology. He did pioneering biology research using electron microscope of Cell , such as work on the 9 + 2 microtubule structure in the axoneme of cilia....
, Albert Claude
Albert Claude

Albert Claude was a Belgium biologist who won the Nobel Prize in Physiology or Medicine in 1974. He studied medicine at the University of Liege ....
, and Ernest F. Fullam in 1945.

These structures are responsible for several specialized functions: protein translation
Protein biosynthesis

Protein synthesis is the process in which cell build proteins. The term is sometimes used to refer only to protein translation but more often it refers to a multi-step process, beginning with amino acid synthesis and transcription which are then used for translation ....
, folding and transport of proteins to be used in the cell membrane
Cell membrane

The cell membrane is the interface between the cellular machinery inside the cell and the fluid outside.It is a semipermeable lipid bilayer found in all cell ....
 (e.g. transmembrane receptor
Transmembrane receptor

Transmembrane receptors are integral membrane proteins, which reside and operate typically within a cell's plasma membrane, but also in the biological membrane of some subcellular compartments and organelles....
s and other integral membrane protein
Integral membrane protein

An Integral Membrane Protein is a protein molecule that is permanently attached to the biological membrane. Such proteins can be separated from the biological membranes only using detergents, nonpolar solvents, or sometimes Denaturation agents....
s), or to be secreted (exocytosed
Exocytosis

Exocytosis is the durable process by which a cell directs the contents of secretory Vesicle_ out of the cell membrane. These membrane-bound vesicles contain soluble proteins to be secreted to the extracellular environment, as well as membrane proteins and lipids that are sent to become components of the cell membrane....
) from the cell (e.g.






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The endoplasmic reticulum (ER) is a eukaryotic
Eukaryote

Animals, plants, fungus, and protists are eukaryotes , organisms whose Cell are organized into complex structures enclosed within Cell membrane....
 organelle
Organelle

In cell biology, an organelle is a specialized subunit within a cell that has a specific function, and is usually separately enclosed within its own lipid membrane....
 that forms an interconnected network of tubules, vesicles
Vesicle (biology)

A vesicle is a small bubble of liquid within a cell. More technically, a vesicle is a small, intracellular, membrane-enclosed sac that stores or transports substances within a cell....
, and cisterna
Cisterna

A cisterna comprises a flattened membrane disk that makes up the Golgi apparatus. A typical Golgi has anywhere from 3 to 7 cisternae stacked upon each other like a stack of dinner plates, but there are usually around 6....
e within cells
Cell (biology)

The cell is the structural and functional unit of all known Life organisms. It is the smallest unit of an organism that is classified as living, and is often called the building bricks of life....
. The lacey membranes of the endoplasmic reticulum were first seen by Keith R. Porter
Keith R. Porter

Keith R. Porter was a Canada Cell biology. He did pioneering biology research using electron microscope of Cell , such as work on the 9 + 2 microtubule structure in the axoneme of cilia....
, Albert Claude
Albert Claude

Albert Claude was a Belgium biologist who won the Nobel Prize in Physiology or Medicine in 1974. He studied medicine at the University of Liege ....
, and Ernest F. Fullam in 1945.

These structures are responsible for several specialized functions: protein translation
Protein biosynthesis

Protein synthesis is the process in which cell build proteins. The term is sometimes used to refer only to protein translation but more often it refers to a multi-step process, beginning with amino acid synthesis and transcription which are then used for translation ....
, folding and transport of proteins to be used in the cell membrane
Cell membrane

The cell membrane is the interface between the cellular machinery inside the cell and the fluid outside.It is a semipermeable lipid bilayer found in all cell ....
 (e.g. transmembrane receptor
Transmembrane receptor

Transmembrane receptors are integral membrane proteins, which reside and operate typically within a cell's plasma membrane, but also in the biological membrane of some subcellular compartments and organelles....
s and other integral membrane protein
Integral membrane protein

An Integral Membrane Protein is a protein molecule that is permanently attached to the biological membrane. Such proteins can be separated from the biological membranes only using detergents, nonpolar solvents, or sometimes Denaturation agents....
s), or to be secreted (exocytosed
Exocytosis

Exocytosis is the durable process by which a cell directs the contents of secretory Vesicle_ out of the cell membrane. These membrane-bound vesicles contain soluble proteins to be secreted to the extracellular environment, as well as membrane proteins and lipids that are sent to become components of the cell membrane....
) from the cell (e.g. digestive enzyme
Enzyme

Enzymes are biomolecules that catalysis chemical reactions. Almost all enzymes are proteins. In enzymatic reactions, the molecules at the beginning of the process are called Substrate , and the enzyme converts them into different molecules, the products....
s); sequestration of calcium
Calcium

Calcium is the chemical element with the symbol Ca and atomic number 20. It has an atomic mass of 40.078 amu. Calcium is a soft grey alkaline earth metal, and is the fifth most abundant element by mass in the earth's Crust ....
; and production and storage of glycogen
Glycogen

Glycogen is a polysaccharide of glucose which functions as the secondary short term energy storage in animal cells. It is made primarily by the liver and the muscles, but can also be made by the brain and stomach....
, steroid
Steroid

A steroid is a terpenoid lipid characterized by a carbon skeleton with four fused rings, generally arranged in a 6-6-6-5 fashion.Steroids vary by the functional groups attached to these rings and the oxidation state of the rings....
s, and other macromolecules. The endoplasmic reticulum is part of the endomembrane system
Endomembrane system

The endomembrane system is composed of the different membranes that are suspended in the cytoplasm within a eukaryotic cell. These membranes divide the cell into functional and structural compartments, or organelles....
. The basic structure and composition of the ER membrane is similar to the plasma membrane.

Structure

Nucleus Er Golgi
The general structure of the endoplasmic reticulum is an extensive membrane network of cisterna
Cisterna

A cisterna comprises a flattened membrane disk that makes up the Golgi apparatus. A typical Golgi has anywhere from 3 to 7 cisternae stacked upon each other like a stack of dinner plates, but there are usually around 6....
e (sac-like structures) held together by the cytoskeleton
Cytoskeleton

The cytoskeleton is a cellular "scaffolding" or "skeleton" contained within the cytoplasm. The cytoskeleton is present in all cells; it was once thought this structure was unique to eukaryotes, but recent research has identified the prokaryotic cytoskeleton....
. The phospholipid membrane encloses a space, the cisternal space (or lumen), from the cytosol
Cytosol

The cytosol or intracellular fluid is the liquid found inside cell . In eukaryotes this liquid is separated by cell membranes from the contents of the organelles suspended in the cytosol, such as the mitochondrial matrix inside the mitochondrion....
. The functions of the endoplasmic reticulum vary greatly depending on the exact type of endoplasmic reticulum and the type of cell in which it resides. The three varieties are called rough endoplasmic reticulum
Endoplasmic reticulum

The endoplasmic reticulum is a eukaryote organelle that forms an interconnected network of tubules, vesicle , and cisternae within cell . The lacey membranes of the endoplasmic reticulum were first seen by Keith R....
, smooth endoplasmic reticulum
Endoplasmic reticulum

The endoplasmic reticulum is a eukaryote organelle that forms an interconnected network of tubules, vesicle , and cisternae within cell . The lacey membranes of the endoplasmic reticulum were first seen by Keith R....
 and sarcoplasmic reticulum
Endoplasmic reticulum

The endoplasmic reticulum is a eukaryote organelle that forms an interconnected network of tubules, vesicle , and cisternae within cell . The lacey membranes of the endoplasmic reticulum were first seen by Keith R....
.

The quantity of RER and SER in a cell can quickly interchange from one type to the other, depending on changing metabolic needs: one type will undergo numerous changes including new proteins embedded in the membranes in order to transform. Also, massive changes in the protein content can occur without any noticeable structural changes, depending on the enzymatic needs of the cell (as per the functions listed below).

Rough endoplasmic reticulum

The surface of the rough endoplasmic reticulum (RER) is studded with protein-manufacturing ribosome
Ribosome

Ribosomes are complexes of RNA and protein that are found in all cell s. Ribosomes from bacteria, archaea and eukaryotes, the three domains of life on Earth, have significantly different structure and RNA....
s giving it a "rough" appearance (hence its name). The RER is not always studded with these ribosomes, however; initially, the RER appears smooth due to a lack of resident ribosomes. The ribosomes only bind to the ER once it begins to synthesize a protein destined for sorting. The free ribosome begins synthesizing a protein until a cytosolic signal recognition particle
Signal recognition particle

The signal recognition particle is a ribonucleoprotein that recognizes and transports specific proteins to the endoplasmic reticulum in eukaryotes and the plasma membrane in prokaryotes....
 recognizes the pre-piece of 5-15 hydrophobic amino acid
Amino acid

In chemistry, an amino acid is a molecule containing both amine and carboxyl functional groups. These molecules are particularly important in biochemistry, where this term refers to alpha-amino acids with the general formula H2NCHRCOOH, where R is an organic substituent....
s preceded by a positively charged amino acid. This allows the complex to loop the sequence through the hydrophobic RER membrane. The pre-piece is then cleaved off within the lumen of the RER.

The membrane of the RER is continuous with the outer layer of the nuclear envelope
Nuclear envelope

The nuclear envelope is a double lipid bilayer that encloses the genetic material in eukaryote cell . The nuclear envelope also serves as the physical barrier, separating the contents of the nucleus from the cytosol ....
. Although there is no continuous membrane between the RER and the Golgi apparatus
Golgi apparatus

The Golgi apparatus is an organelle found in most eukaryote Cell . It was identified in 1898 by the Italian physician Camillo Golgi and was named after him....
, membrane-bound vesicles shuttle proteins between these two compartments. Vesicles are surrounded by coating proteins called COPI and COPII. COPII
COPII

COPII is a type of vesicle that transports proteins from the rough endoplasmic reticulum to the Golgi apparatus. This is termed anterograde transport....
 targets vesicles to the golgi and COPI
COPI

COPI is a protein that coats vesicle s that transports proteins from the cis end of the Golgi complex to the rough endoplasmic reticulum . This type of transport is termed retrograde transport....
 marks them to be brought back to the RER. The RER works in concert with the Golgi complex to target new proteins
Protein targeting

Protein targeting or protein sorting is the mechanism by which a cell transports proteins to the appropriate positions in the cell or outside of it....
 to their proper destinations. A second method of transport out of the ER are areas called membrane contact site
Membrane contact site

Membrane contact sites are areas within a cell where the membranes of two organelles are arranged in close proximity. These sites are thought to be important in the transport of small molecules such as lipids between organelles, and offer an alternative to the classical mechanism of lipid transport through Vesicle ....
s, where the membranes of the ER and other organelles are held closely together, allowing the transfer of lipids and other small molecules.

The RER is key in multiple functions:
  • lysosomal
    Lysosome

    Lysosomes are organelles that contain digestive enzymes . Some biologists say they can only be found in animal cells, but there is new evidence that supports that they may exist in plant cells....
     enzymes with a mannose-6-phosphate
    Mannose-6-phosphate

    Mannose-6-phosphate is a molecule bound by lectin in the immune system. M6P is converted to fructose 6-phosphate by mannose phosphate isomerase....
     marker added in the cis-Golgi network
  • Secreted
    Secretion

    Secretion is the process of, elaborating and releasing Chemical compound from a cell , or a secreted chemical substance or amount of substance. In contrast to excretion, the substance may have a certain function, rather than being a waste product....
     proteins, either secreted constitutively with no tag, or regulated secretion involving clathrin
    Clathrin

    Clathrin is a protein that is the major constituent of the 'coat' of the clathrin-coated pits and coated vesicles formed during endocytosis of materials at the surface of Cell-surface....
     and paired basic amino acids in the signal peptide
    Signal peptide

    A signal peptide is a short peptide chain that directs the post-translation transport of a protein.Signal peptides may also be called targeting signals, signal sequences, transit peptides, or localization signals....
    .
  • integral membrane proteins that stay imbedded in the membrane as vesicles exit and bind to new membranes. Rab
    Rab (G-protein)

    The Rab family of proteins is a member of the Ras superfamily of monomer G proteins. Approximately 70 types of Rabs have now been identified in humans....
     proteins are key in targeting the membrane, SNAP
    SNAP-25

    SNAP-25 is a cell membrane bound protein anchored to the cytosol face of membranes via Palmitoyl chain in the middle of the molecule. SNAP-25 is a Q-SNARE protein contributing two a-helix in the formation of the exocytosis fusion complex in neurons where it assembles with syntaxin and synaptobrevin....
     and SNARE
    Snare

    A Trapping #Snares is a kind of trap used for capturing animals. It may also mean:* Snare drum* SNARE , a family of proteins involved in vesicle fusion...
     proteins are key in the fusion event.
  • initial glycosylation
    Glycosylation

    Glycosylation is the enzymatic process that links saccharides to produce glycans, either free or attached to proteins and lipids. This enzymatic process produces one of four fundamental components of all cells and also provides a co-translational and post-translational modification mechanism that modulates the structure and function of membr...
     as assembly continues. This is either N-linked or O-linked (O-linked may likely occur in the golgi).
    • N-linked glycosylation: if the protein is properly folded, glycosyltransferase
      Glycosyltransferase

      Glycosyltransferases are enzymes that act as a catalyst for the transfer of a monosaccharide unit from an activated sugar phosphate to an acceptor molecule, usually an alcohol....
       recognizes the AA sequence N
      Asparagine

      Asparagine is one of the 20 most common natural amino acids on Earth. It has carboxamide as the side chain's functional group. It is not an essential amino acid....
      XS
      Serine

      Serine is an organic compound with the chemical formula hydrogenoxygen2carbonCHCH2OH....
       or N
      Asparagine

      Asparagine is one of the 20 most common natural amino acids on Earth. It has carboxamide as the side chain's functional group. It is not an essential amino acid....
      XT
      Threonine

      Threonine is an a-amino acid with the chemical formula HO2CCHCHCH3. Its codons are ACU, ACA, ACC, and ACG. This essential amino acid is classified as Chemical polarity....
       (with the S/T residue phosphorylated) and adds a 14 sugar backbone (2 N-acetylglucosamine, 9 branching mannose
      Mannose

      Mannose is a sugar monomer of the hexose series of carbohydrates....
      , and 3 glucose
      Glucose

      Glucose , a monosaccharide also known as grape sugar, blood sugar, or corn sugar, is a very important carbohydrate in biology....
       at the end) to the side chain nitrogen
      Nitrogen

      Nitrogen is a chemical element that has the symbol N and atomic number 7 and atomic mass 14.00674?. Elemental nitrogen is a colorless, odorless, tasteless and mostly inert diatomic gas at standard conditions, constituting 78% by volume of Earth's atmosphere....
       of Asn.


Smooth endoplasmic reticulum

The smooth endoplasmic reticulum (SER) has functions in several metabolic processes, including synthesis of lipids and steroids, metabolism of carbohydrates, regulation of calcium concentration, drug detoxification, attachment of receptors on cell membrane proteins, and steroid metabolism
Steroid metabolism

Steroid metabolism is the complete set of chemical reactions in organisms that produce, modify and consume steroids. These metabolic pathways include:...
. It is connected to the nuclear envelope. Smooth endoplasmic reticulum is found in a variety of cell types (both animal and plant) and it serves different functions in each. The Smooth ER also contains the enzyme glucose-6-phosphatase which converts glucose-6-phosphate
Glucose-6-phosphate

Glucose 6-phosphate is glucose sugar phosphorylated on carbon 6. This compound is very common in cell as the vast majority of glucose entering a cell will become phosphorylated in this way....
 to glucose, a step in gluconeogenesis
Gluconeogenesis

Gluconeogenesis is a metabolic pathway that results in the generation of glucose from non-carbohydrate carbon substrates such as lactic acid, glycerol, and glucogenic amino acids....
. The SER consists of tubules and vesicles that branch forming a network. In some cells there are dilated areas like the sacs of RER. The network of SER allows increased surface area for the action or storage of key enzymes and the products of these enzymes.

Sarcoplasmic reticulum
The sarcoplasmic reticulum (SR), from the Greek sarx, "flesh", is a special type of smooth ER found in smooth
Smooth muscle

Smooth muscle is a type of non-striated muscle, found within the tunica media layer of large and small arteries and veins, the urinary bladder, uterus, male and female reproductive tracts, gastrointestinal tract, respiratory tract, the ciliary muscle, and iris of the eye....
 and striated muscle
Striated muscle

Striated muscle is a form of fibres that are combined into parallel fibres. More specifically, it can refer to:* Skeletal muscle* Cardiac muscle~cardiac referring to the heart....
. The only structural difference between this organelle and the SER is the medley of proteins they have, both bound to their membranes and drifting within the confines of their lumens. This fundamental difference is indicative of their functions: the SER synthesizes molecules while the SR stores and pumps calcium ions. The SR contains large stores of calcium, which it sequesters and then releases when the muscle cell is stimulated. The SR's release of calcium upon electrical stimulation of the cell plays a major role in excitation-contraction coupling
Excitation-contraction coupling

Excitation-contraction coupling is a term coined in 1952 to describe the physiological process of converting an electrical stimulus to mechanical response ....
.

Functions

The endoplasmic reticulum serves many general functions, including the facilitation of protein folding and the transport of synthesized proteins in sacs called cisternae.

Correct folding of newly-made proteins is made possible by several endoplasmic reticulum chaperone proteins, including protein disulfide isomerase
Protein disulfide isomerase

Protein disulfide isomerase or PDI is an enzyme in the endoplasmic reticulum in eukaryotes or periplasmic space of prokaryotes that catalyzes the formation and breakage of disulfide bonds between cysteine residues within proteins as they fold....
 (PDI), ERp29, the Hsp70
Hsp70

The 70 kilodalton heat shock proteins are a family of ubiquitously expressed heat shock proteins. Proteins with similar structure exist in virtually all living organisms....
 family member Grp78, calnexin
Calnexin

Calnexin is a 90kDa integral protein of the endoplasmic reticulum . It consists of a large N-terminal calcium-Binding Lumen protein domain, a single transmembrane helix and a short , acidic cytoplasmic tail....
, calreticulin
Calreticulin

Calreticulin is a multifunctional protein that binds calcium ions , rendering it inactive. The Ca2+ is bound with low Chemical affinity, but high capacity, and can be released on a signal ....
, and the peptidylpropyl isomerase family. Only properly-folded proteins are transported from the rough ER to the Golgi complex.

Transport of proteins

Secretory proteins, mostly glycoproteins, are moved across the endoplasmic reticulum membrane. Proteins that are transported by the endoplasmic reticulum and from there throughout the cell are marked with an address tag called a signal sequence
Signal peptide

A signal peptide is a short peptide chain that directs the post-translation transport of a protein.Signal peptides may also be called targeting signals, signal sequences, transit peptides, or localization signals....
. The N-terminus (one end) of a polypeptide chain (i.e., a protein) contains a few amino acid
Amino acid

In chemistry, an amino acid is a molecule containing both amine and carboxyl functional groups. These molecules are particularly important in biochemistry, where this term refers to alpha-amino acids with the general formula H2NCHRCOOH, where R is an organic substituent....
s that work as an address tag, which are removed when the polypeptide reaches its destination. Proteins that are destined for places outside the endoplasmic reticulum are packed into transport vesicle
Vesicle (biology)

A vesicle is a small bubble of liquid within a cell. More technically, a vesicle is a small, intracellular, membrane-enclosed sac that stores or transports substances within a cell....
s and moved along the cytoskeleton
Cytoskeleton

The cytoskeleton is a cellular "scaffolding" or "skeleton" contained within the cytoplasm. The cytoskeleton is present in all cells; it was once thought this structure was unique to eukaryotes, but recent research has identified the prokaryotic cytoskeleton....
 toward their destination.

The endoplasmic reticulum is also part of a protein sorting pathway. It is, in essence, the transportation system of the eukaryotic cell. The majority of endoplasmic reticulum resident proteins are retained in the endoplasmic reticulum through a retention motif. This motif is composed of four amino acids at the end of the protein sequence. The most common retention sequence is KDEL
Amino acid

In chemistry, an amino acid is a molecule containing both amine and carboxyl functional groups. These molecules are particularly important in biochemistry, where this term refers to alpha-amino acids with the general formula H2NCHRCOOH, where R is an organic substituent....
 (lys-asp-glu-leu). However, variation on KDEL does occur and other sequences can also give rise to endoplasmic reticulum retention. It is not known if such variation can lead to sub-endoplasmic reticulum localizations. There are three KDEL receptors in mammalian cells, and they have a very high degree of sequence identity. The functional differences between these receptors remain to be established.

Other functions

  • Insertion of proteins into the endoplasmic reticulum membrane: Integral membrane protein
    Integral membrane protein

    An Integral Membrane Protein is a protein molecule that is permanently attached to the biological membrane. Such proteins can be separated from the biological membranes only using detergents, nonpolar solvents, or sometimes Denaturation agents....
    s are inserted into the endoplasmic reticulum membrane as they are being synthesized (co-translational translocation). Insertion into the endoplasmic reticulum membrane requires the correct topogenic signal sequence
    Signal sequence

    Signal sequence can refer to any of the following:*Protein targeting*Signal peptide*DNA uptake signal sequence...
    s in the protein.
  • Glycosylation: Glycosylation
    Glycosylation

    Glycosylation is the enzymatic process that links saccharides to produce glycans, either free or attached to proteins and lipids. This enzymatic process produces one of four fundamental components of all cells and also provides a co-translational and post-translational modification mechanism that modulates the structure and function of membr...
     involves the attachment of oligosaccharide
    Oligosaccharide

    An oligosaccharide is a saccharide polymer containing a small number of component sugars, also known as simple sugars. The name derived from the Greek oligos, meaning "a few"....
    s.
  • Disulfide bond formation and rearrangement: Disulfide bonds stabilize the tertiary and quaternary structure of many proteins.
  • Drug Metabolism: The smooth ER is the site at which some drugs are modified by microsomal enzymes which include the cytochrome P450 enzymes.


See also

  • ERAD
  • Protein targeting
    Protein targeting

    Protein targeting or protein sorting is the mechanism by which a cell transports proteins to the appropriate positions in the cell or outside of it....
  • Secretory pathway
    Secretory pathway

    The secretory pathway is a series of steps a Cell uses to move proteins out of the cell; a process known as secretion. The path of a protein destined for secretion has its origins in the rough endoplasmic reticulum, a membrane bound Cellular_compartment in the cell....
  • Reticulon
    Reticulon

    Reticulons are a group of evolutionary conservative proteins residing predominantly in endoplasmic reticulum, playing a role in reticulum-Golgi trafficking, vesicle formation, membrane morphogenesis and other processes yet to be defined....
    s


External links