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Carbon-13

 

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Carbon-13



 
 
Carbon-13 (13C) is a natural, stable
Stable isotope

Stable isotopes are chemical Isotope that are not radioactive . By this definition, there are 256 known stable isotopes of the 80 elements which have one or more stable isotopes....
 isotope
Isotope

Isotopes are any of the different types of atoms of the same chemical element, each having a different atomic mass . Isotopes of an element have atomic nucleus with the same number of protons but different numbers of neutron....
 of carbon
Carbon

Carbon is a chemical element with chemical symbol C and atomic number 6. As a member of group 14 on the periodic table, it is nonmetallic and tetravalence?making four electrons available to form covalent bond chemical bonds....
 and one of the environmental isotopes
Environmental isotopes

The environmental isotopes are a subset of the isotopes, both Stable isotopes and Radioactive isotopes, which are the object of Isotope geochemistry....
. It makes up about 1.1% of all natural carbon on Earth
Earth

Earth is the third planet from the Sun. Earth is the largest of the terrestrial planets in the Solar System in diameter, mass and density. It is also referred to as the World and Wiktionary:Terra.Note that by International Astronomical Union convention, the term "Terra" is used for naming extensive land masses, rather...
.

Detection by NMR spectroscopy
Because of its nuclear spin
Spin (physics)

In quantum mechanics, spin is a fundamental property of atomic nucleus, hadrons, and elementary particles. For particles with non-zero spin, spin direction is an important intrinsic degrees of freedom ....
 properties, this isotope responds to a resonant radio frequency
Radio frequency

Radio frequency is a frequency or rate of oscillation within the range of about 3 Hz to 300 GHz. This range corresponds to frequency of alternating current electrical signals used to produce and detect radio waves....
 (RF) signal. The absorption and emission of the RF signal by the nuclei
Atomic nucleus

The nucleus of an atom is the very dense region, consisting of nucleons , at the center of an atom. Although the size of the nucleus varies considerably according to the mass of the atom, the size of the entire atom is comparatively constant....
 can be monitored and detected using nuclear magnetic resonance spectroscopy, most commonly known as NMR spectroscopy
NMR spectroscopy

Nuclear magnetic resonance spectroscopy, most commonly known as NMR spectroscopy, is the name given to a technique which exploits the magnetic properties of certain nuclei....
.






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Carbon-13 (13C) is a natural, stable
Stable isotope

Stable isotopes are chemical Isotope that are not radioactive . By this definition, there are 256 known stable isotopes of the 80 elements which have one or more stable isotopes....
 isotope
Isotope

Isotopes are any of the different types of atoms of the same chemical element, each having a different atomic mass . Isotopes of an element have atomic nucleus with the same number of protons but different numbers of neutron....
 of carbon
Carbon

Carbon is a chemical element with chemical symbol C and atomic number 6. As a member of group 14 on the periodic table, it is nonmetallic and tetravalence?making four electrons available to form covalent bond chemical bonds....
 and one of the environmental isotopes
Environmental isotopes

The environmental isotopes are a subset of the isotopes, both Stable isotopes and Radioactive isotopes, which are the object of Isotope geochemistry....
. It makes up about 1.1% of all natural carbon on Earth
Earth

Earth is the third planet from the Sun. Earth is the largest of the terrestrial planets in the Solar System in diameter, mass and density. It is also referred to as the World and Wiktionary:Terra.Note that by International Astronomical Union convention, the term "Terra" is used for naming extensive land masses, rather...
.

Detection by NMR spectroscopy


Because of its nuclear spin
Spin (physics)

In quantum mechanics, spin is a fundamental property of atomic nucleus, hadrons, and elementary particles. For particles with non-zero spin, spin direction is an important intrinsic degrees of freedom ....
 properties, this isotope responds to a resonant radio frequency
Radio frequency

Radio frequency is a frequency or rate of oscillation within the range of about 3 Hz to 300 GHz. This range corresponds to frequency of alternating current electrical signals used to produce and detect radio waves....
 (RF) signal. The absorption and emission of the RF signal by the nuclei
Atomic nucleus

The nucleus of an atom is the very dense region, consisting of nucleons , at the center of an atom. Although the size of the nucleus varies considerably according to the mass of the atom, the size of the entire atom is comparatively constant....
 can be monitored and detected using nuclear magnetic resonance spectroscopy, most commonly known as NMR spectroscopy
NMR spectroscopy

Nuclear magnetic resonance spectroscopy, most commonly known as NMR spectroscopy, is the name given to a technique which exploits the magnetic properties of certain nuclei....
. This is a technique that gives information on the identity and number of atoms adjacent to other atoms in said molecule, thereby giving clues to the structure of an organic molecule. Since 12C has zero spin, it does not give an NMR signal, and since only 1% of the atoms in a molecule are 13C, it is unlikely that carbon-carbon coupling is seen. Acquiring a 13C NMR
Carbon-13 NMR

Carbon-13 NMR is the application of NMR spectroscopy with respect to carbon. It is analogous to proton NMR and allows the identification of carbon atoms in an organic molecule just as proton NMR identifies hydrogen atoms....
 spectrum can take from a couple of minutes to hours because many scans have to be summed together in order to have results distinguishable from background noise.

In biological NMR
Protein nuclear magnetic resonance spectroscopy

Protein nuclear magnetic resonance spectroscopy is a field of structural biology in which NMR spectroscopy is used to obtain information about the structure and dynamics of proteins....
, protein
Protein

Proteins are organic compounds made of amino acids arranged in a linear chain and joined together by peptide bonds between the carboxyl and amino groups of adjacent amino acid Residue ....
s can be deliberately labelled with 13C (and usually nitrogen-15
Nitrogen-15

Nitrogen-15 is a stable, non-radioactive isotope of nitrogen. It is often used in agriculture and medicine research. Nitrogen-15 is frequently used in nuclear magnetic resonance spectroscopy , because unlike the more abundant nitrogen-14, it has a atomic nucleus spin of ?, which simplifies observation by NMR....
) to facilitate structure
Protein structure

Proteins are an important class of biological macromolecules present in all biological organisms, made up of such chemical element as carbon,hydrogen, nitrogen, oxygen, and sulphur....
 determination. This is achieved by growing microorganism
Microorganism

A microorganism or microbe is an organism that is microscopic . The study of microorganisms is called microbiology, a subject that began with Anton van Leeuwenhoek's discovery of microorganisms in 1675, using a microscope of his own design....
s genetically engineered
Genetic engineering

Engineering There are a number of ways through which genetic engineering is accomplished. Essentially, the process has five main steps# Isolation of the genes of interest...
 to express the protein on a growth medium
Growth medium

A growth medium or culture medium is a liquid or gel designed to support the growth of microorganisms or Cell s , or small plants like the moss Physcomitrella patens ....
 with 13C labeled glucose as the only carbon source. In this way proteins with a 13C content of almost 100% can be produced.

Detection by mass spectrometry

A mass spectrum
Mass spectrum

A mass spectrum is an intensity vs. m/z plot representing a chemical analysis. Hence, the mass spectrum of a sample is a pattern representing the distribution of components by mass in a sample....
 of an organic compound will usually contain a small peak of one mass unit greater than the apparent molecular ion peak (M). This is known as the M+1 peak and originates due to the presence of 13C atoms. A molecule containing one carbon atom will be expected to have an M+1 peak of approximately 1.1% of the size of the M peak as 1.1% of the carbon atoms will be 13C rather than 12C
Carbon-12

Carbon-12 is the most Abundance of the two Stable_isotope isotopes of the element carbon, accounting for 98.89% of carbon; it contains 6 protons, 6 neutrons, and 6 electrons....
. Similarly a molecule containing two carbon atoms will be expected to have an M+1 peak of approximately 2.2% of the size of the M peak, as there is double the previous likelihood that a molecule will contain a 13C atom.

In the above the mathematics and chemistry have been simplified, however it can be used effectively to give the number of carbon atoms for small to medium sized organic molecules. In the following formula the result should be rounded to the nearest integer
Integer

The integers are natural numbers including 0 and their negative and non-negative numberss . They are numbers that can be written without a fractional or decimal component, and fall within the set ....
:

C = number of C atoms X = amplitude
Amplitude

Amplitude is the magnitude of change in the oscillating variable, with each oscillation, within an oscillating system. For instance, sound waves are oscillations in atmospheric pressure and their amplitudes are proportional to the change in pressure during one oscillation....
 of the M ion peak Y = amplitude of the M+1 ion peak

13C-enriched compounds are used in the research of metabolic processes by means of mass spectrometry. Such compounds are safe because they are non-radioactive. In addition, 13C is used to quantitate proteins (quantitative proteomics
Proteomics

Proteomics is the large-scale study of proteins, particularly their protein structure and functional genomics. Proteins are vital parts of living organisms, as they are the main components of the physiological metabolic pathways of biological cell....
). One important application is `stable isotope labeling with amino acids in cell culture´ (SILAC
Silac

SILAC is a mass spectrometry-based technique developed to detect differences in protein abundance between two samples . It is one of the most popular methods for quantitative proteomics....
).

The ratio of 13C to 12C is slightly higher in plants employing C4 carbon fixation
C4 carbon fixation

C4 carbon fixation is one of three biochemical mechanisms, along with C3 carbon fixation and CAM photosynthesis, functioning in land plants to "fix" carbon dioxide for sugar production through photosynthesis....
 than in plants employing C3 carbon fixation
C3 carbon fixation

carbon fixation is a metabolic pathway for carbon fixation in photosynthesis. This process converts carbon dioxide and ribulose bisphosphate into 3-phosphoglycerate through the following reaction:...
. Because the different isotope ratios for the two kinds of plants propagate through the food chain, it is possible determine if the principal diet of a human or other animal consists primarily of C3 plants or C4 plants by measuring the isotopic signature
Isotopic signature

An isotopic signature is a ratio of stable or unstable isotopes of particular elements found in an investigated material. The atomic mass of different isotopes affect their chemical kinetics behavior, leading to natural isotope separation processes....
 of their collagen and other tissues. Deliberate increase of proportion of 13C in diet is the concept of i-food
I-food

i-food contains nutritients in which some atoms are replaced with their heavier non-radioactive isotopes . Biomolecules that incorporate heavier isotopes give rise to more stable molecular structures with increased resistance to damages associated with ageing and age-related disease....
, a proposed way to increase longevity
Longevity

The word longevity is sometimes used as a synonym for "life expectancy" in demography. However, this is not the most popular or accepted definition....
.

See also

  • Carbon
    Carbon

    Carbon is a chemical element with chemical symbol C and atomic number 6. As a member of group 14 on the periodic table, it is nonmetallic and tetravalence?making four electrons available to form covalent bond chemical bonds....
  • Isotopes of carbon
    Isotopes of carbon

    Carbon Standard atomic mass: 12.0107 unified atomic mass unit...
  • Isotope fractionation
    Isotope fractionation

    There are three types of isotope fractionation:* equilibrium fractionation* kinetic fractionation* mass-independent fractionation...