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Blot (biology)

 

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Blot (biology)



 
 
In molecular biology
Molecular biology

Molecular biology is the study of biology at a molecule level. The field overlaps with other areas of biology and chemistry, particularly genetics and biochemistry....
 and genetics
Genetics

Genetics , a discipline of biology, is the science of heredity and Genetic variation in living organisms. The fact that living things inherit traits from their parents has been used since prehistoric times to improve crop plants and animals through selective breeding....
, a blot is a method of transferring protein
Protein

Proteins are organic compounds made of amino acids arranged in a linear chain and joined together by peptide bonds between the carboxyl and amino groups of adjacent amino acid Residue ....
s, DNA
DNA

Deoxyribonucleic acid is a nucleic acid that contains the genetics instructions used in the development and functioning of all known living organisms and some viruses....
 or RNA
RNA

Ribonucleic acid is a type of molecule that consists of a long chain of nucleotide units. Each nucleotide consists of a nucleobase, a ribose sugar, and a phosphate....
, onto a carrier (for example, a nitrocellulose
Nitrocellulose

Nitrocellulose is a highly flammable compound formed by nitrating cellulose through exposure to nitric acid or another powerful nitrating agent....
 PVDF or nylon
Nylon

Nylon is a generic designation for a family of synthetic polymers known generically as polyamides and first produced on February 28, 1935 by Wallace Carothers at DuPont....
 membrane). In many instances, this is done after a gel electrophoresis
Gel electrophoresis

Gel electrophoresis is a technique used for the separation of DNA , RNA , or protein molecules using an electric current applied to a gel matrix....
, transferring the molecules from the gel
Gel

A gel is a solid, gelatin material that can have properties ranging from soft and weak to hard and tough. Gels are defined as a substantially dilute crosslinked system, which exhibits no flow when in the steady-state....
 onto the blotting membrane, and other times adding the samples directly onto the membrane. After the blotting, the transferred proteins, DNA or RNA are then visualized by one or more different methods:






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Encyclopedia


In molecular biology
Molecular biology

Molecular biology is the study of biology at a molecule level. The field overlaps with other areas of biology and chemistry, particularly genetics and biochemistry....
 and genetics
Genetics

Genetics , a discipline of biology, is the science of heredity and Genetic variation in living organisms. The fact that living things inherit traits from their parents has been used since prehistoric times to improve crop plants and animals through selective breeding....
, a blot is a method of transferring protein
Protein

Proteins are organic compounds made of amino acids arranged in a linear chain and joined together by peptide bonds between the carboxyl and amino groups of adjacent amino acid Residue ....
s, DNA
DNA

Deoxyribonucleic acid is a nucleic acid that contains the genetics instructions used in the development and functioning of all known living organisms and some viruses....
 or RNA
RNA

Ribonucleic acid is a type of molecule that consists of a long chain of nucleotide units. Each nucleotide consists of a nucleobase, a ribose sugar, and a phosphate....
, onto a carrier (for example, a nitrocellulose
Nitrocellulose

Nitrocellulose is a highly flammable compound formed by nitrating cellulose through exposure to nitric acid or another powerful nitrating agent....
 PVDF or nylon
Nylon

Nylon is a generic designation for a family of synthetic polymers known generically as polyamides and first produced on February 28, 1935 by Wallace Carothers at DuPont....
 membrane). In many instances, this is done after a gel electrophoresis
Gel electrophoresis

Gel electrophoresis is a technique used for the separation of DNA , RNA , or protein molecules using an electric current applied to a gel matrix....
, transferring the molecules from the gel
Gel

A gel is a solid, gelatin material that can have properties ranging from soft and weak to hard and tough. Gels are defined as a substantially dilute crosslinked system, which exhibits no flow when in the steady-state....
 onto the blotting membrane, and other times adding the samples directly onto the membrane. After the blotting, the transferred proteins, DNA or RNA are then visualized by one or more different methods:
  • colorant staining (for example, silver staining of proteins)
  • autoradiographic visualization of radioactive labelled molecules (performed before the blot)
  • specific labelling of some proteins or nucleic acid
    Nucleic acid

    A nucleic acid is a macromolecule composed of chains of monomeric nucleotides. In biochemistry these molecules carry genetic information or form structures within Cell ....
    s. It is done with antibodies
    Antibody

    Antibodies are gamma globulin proteins that are found in blood or other bodily fluids of vertebrates, and are used by the immune system to identify and neutralize foreign objects, such as bacterium and viruses....
     or hybridization probe
    Hybridization probe

    In molecular biology, a hybridization probe is a fragment of DNA or RNA of variable length , which is used to detect in DNA or RNA samples the presence of nucleotide sequences that are Complementarity to the sequence in the probe....
    s that bind only to some molecules of the blot and have an enzyme
    Enzyme

    Enzymes are biomolecules that catalysis chemical reactions. Almost all enzymes are proteins. In enzymatic reactions, the molecules at the beginning of the process are called Substrate , and the enzyme converts them into different molecules, the products....
     joined to them. After proper washing, this enzymatic activity (and so, the molecules we search in the blot) is visualized by incubation with proper reactive, rendering either a colored deposit on the blot or a chemiluminiscent reaction which is registered by photographic film
    Film

    Film encompasses individual motion pictures, the field of film as an art form, and the film industry. Films are produced by recording images from the world with cameras, or by creating images using animation techniques or special effects....
    .


Common blot methods are :
  • Southern blot
    Southern blot

    A Southern blot is a method routinely used in molecular biology to check for the presence of a DNA sequence in a DNA sample. Southern blotting combines agarose gel electrophoresis electrophoresis for size separation of DNA with methods to transfer the size-separated DNA to a filter membrane for probe hybridization....
     for DNA
    DNA

    Deoxyribonucleic acid is a nucleic acid that contains the genetics instructions used in the development and functioning of all known living organisms and some viruses....
  • Northern blot
    Northern blot

    The northern blot is a technique used in molecular biology research to study gene expression. It takes its name from its similarity to the Southern blot technique, named for biologist Edwin Southern....
     for RNA
    RNA

    Ribonucleic acid is a type of molecule that consists of a long chain of nucleotide units. Each nucleotide consists of a nucleobase, a ribose sugar, and a phosphate....
  • Western blot
    Western blot

    The western blot is an analytical technique used to detect specific proteins in a given sample of tissue homogenate or extract. It uses gel electrophoresis to separate native or denatured proteins by the length of the polypeptide or by the 3-D structure of the protein ....
     for protein
    Protein

    Proteins are organic compounds made of amino acids arranged in a linear chain and joined together by peptide bonds between the carboxyl and amino groups of adjacent amino acid Residue ....
    s
  • Eastern blotting
    Eastern blotting

    Eastern blotting is a technique to detect post-translational modifications of proteins and is an extension of the biochemical technique of western blotting....
     for posttranslational modification
    Posttranslational modification

    Posttranslational modification is the chemistry modification of a protein after its translation . It is one of the later steps in protein biosynthesis for many proteins....
  • Southwestern blot
    Southwestern blot

    Southwestern blotting, based along the lines of Southern blotting and first described by B. Bowen and colleagues in 1980, is a lab technique which involves identifying and characterizing DNA-binding proteins by their ability to bind to specific oligonucleotide probes....
  • Dot blot
    Dot blot

    A Dot blot is a technique in molecular biology used to detect biomolecules. It represents a simplification of the northern blot, Southern blot, or western blot methods....
  • Slot blot


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